| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963498
Identifier: 157963498
GI number: 157963498
Start: 4485983
End: 4487062
Strand: Direct
Name: 157963498
Synonym: Spea_3686
Alternate gene names: NA
Gene position: 4485983-4487062 (Clockwise)
Preceding gene: 157963497
Following gene: 157963499
Centisome position: 86.69
GC content: 35.28
Gene sequence:
>1080_bases TTGAAGAAAAAAATACAGTTTTTTCATAAAACAAGAGCAAGAGTTATACAACGAAAAGCCCTAAAAAAGGCTCAACGAAA AACTAGAAGTAAGCAGACTTCTAGTACTGGTCGCCCAAAAAAACTCGGCGCAGCTGAAATAATTTATGCACCTCTCGAGT TTTCTATATATGAGCTAGCTGAAGGTGACACTCAAAAATACAGCGAAGCCATTGATTTTATTGAAAAAATAAAATCAATT GACCATTCTAAATCCTATATTATTGATTTTTCCAATACTGAACGTGTTACAGCGGCAGCTTTGCTACTTCTTTATGCTAC GATAGATCAAAAGAAAGTTACTGGGCCAGTAAACTCCTCAATCGTATGGCCACATAGCGATTCAGCAAGAAGGGTTATAG TAAAATCAGGGTTAAATAAGTTATTGCAAAACACTCTAAATACAGAGGAACCTGACTTTTCAAATACTATTATTAGTGGT GTTGGTAATGATAAAGTTGAAAGTCTCATCGATCATATAGAGCAATCTGTATACAAAAATCAAATGGATGACGAGGTTGA ATACCTATATGGTGATGCAATATCTGAAACAATTAATAATGTAGGAAGACATGCTTATCCCGAATCAAATGCATCTGATA AAAAATGGTGGATTCTTTGTGATGTAATAGGTGATAAACTATTTGTACTTATTTATGACTGTGGAATTGGTATCCCTAAA ACGGTTGTCAAAAGAAACTGGTTTATTAGTTCTGTAGAAAAATTTTATCCTGAGCAATATGCCGAAGCCAAACAGGCTCC TGCGAGTCAAAGCAAATTGTATTTTTTTGGCTCTTTAAAGGACGAAAATCTTATTGATCTTGCGATGAAGCAAGATGTAA CAGGAACTCTCAAAAGTAAACACGGTCAAGGAAGTAAGAGCATTAAAGCTCTAGTCAGCGAAACTCATAGAGGAAAGTTG TGGATTTACAGCAATAAAGGGCTTTTAACTTTTAAGAATGTTGACACCCCGGTAGACTTGCACACCCTCAACAAAGGATT TCCTGGAACTTTAGTACAGTGGAACATTAAAATATCATGA
Upstream 100 bases:
>100_bases TACCTATTCATGTAAGAATCAAAAAATTATACAATACTATCAACATCTTGTTGTTAATATTTGCACCGTCATACAATATA ATATTTTTTAGGGACAAAAG
Downstream 100 bases:
>100_bases AAACTAAGAAGCTAAAGAATATTGTAGTTACAGATTTCCATCCAAAGCCTTACGGTAGGTATACAACTGATGGCCCTGGT TGTGAATTATCAAGTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKKKIQFFHKTRARVIQRKALKKAQRKTRSKQTSSTGRPKKLGAAEIIYAPLEFSIYELAEGDTQKYSEAIDFIEKIKSI DHSKSYIIDFSNTERVTAAALLLLYATIDQKKVTGPVNSSIVWPHSDSARRVIVKSGLNKLLQNTLNTEEPDFSNTIISG VGNDKVESLIDHIEQSVYKNQMDDEVEYLYGDAISETINNVGRHAYPESNASDKKWWILCDVIGDKLFVLIYDCGIGIPK TVVKRNWFISSVEKFYPEQYAEAKQAPASQSKLYFFGSLKDENLIDLAMKQDVTGTLKSKHGQGSKSIKALVSETHRGKL WIYSNKGLLTFKNVDTPVDLHTLNKGFPGTLVQWNIKIS
Sequences:
>Translated_359_residues MKKKIQFFHKTRARVIQRKALKKAQRKTRSKQTSSTGRPKKLGAAEIIYAPLEFSIYELAEGDTQKYSEAIDFIEKIKSI DHSKSYIIDFSNTERVTAAALLLLYATIDQKKVTGPVNSSIVWPHSDSARRVIVKSGLNKLLQNTLNTEEPDFSNTIISG VGNDKVESLIDHIEQSVYKNQMDDEVEYLYGDAISETINNVGRHAYPESNASDKKWWILCDVIGDKLFVLIYDCGIGIPK TVVKRNWFISSVEKFYPEQYAEAKQAPASQSKLYFFGSLKDENLIDLAMKQDVTGTLKSKHGQGSKSIKALVSETHRGKL WIYSNKGLLTFKNVDTPVDLHTLNKGFPGTLVQWNIKIS >Mature_359_residues MKKKIQFFHKTRARVIQRKALKKAQRKTRSKQTSSTGRPKKLGAAEIIYAPLEFSIYELAEGDTQKYSEAIDFIEKIKSI DHSKSYIIDFSNTERVTAAALLLLYATIDQKKVTGPVNSSIVWPHSDSARRVIVKSGLNKLLQNTLNTEEPDFSNTIISG VGNDKVESLIDHIEQSVYKNQMDDEVEYLYGDAISETINNVGRHAYPESNASDKKWWILCDVIGDKLFVLIYDCGIGIPK TVVKRNWFISSVEKFYPEQYAEAKQAPASQSKLYFFGSLKDENLIDLAMKQDVTGTLKSKHGQGSKSIKALVSETHRGKL WIYSNKGLLTFKNVDTPVDLHTLNKGFPGTLVQWNIKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40546; Mature: 40546
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIQFFHKTRARVIQRKALKKAQRKTRSKQTSSTGRPKKLGAAEIIYAPLEFSIYELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCHHHHHHHC EGDTQKYSEAIDFIEKIKSIDHSKSYIIDFSNTERVTAAALLLLYATIDQKKVTGPVNSS CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCC IVWPHSDSARRVIVKSGLNKLLQNTLNTEEPDFSNTIISGVGNDKVESLIDHIEQSVYKN EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC QMDDEVEYLYGDAISETINNVGRHAYPESNASDKKWWILCDVIGDKLFVLIYDCGIGIPK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCH TVVKRNWFISSVEKFYPEQYAEAKQAPASQSKLYFFGSLKDENLIDLAMKQDVTGTLKSK HHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHC HGQGSKSIKALVSETHRGKLWIYSNKGLLTFKNVDTPVDLHTLNKGFPGTLVQWNIKIS CCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCHHHCCCCCCCCEEEEEEEEC >Mature Secondary Structure MKKKIQFFHKTRARVIQRKALKKAQRKTRSKQTSSTGRPKKLGAAEIIYAPLEFSIYELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCHHHHHHHC EGDTQKYSEAIDFIEKIKSIDHSKSYIIDFSNTERVTAAALLLLYATIDQKKVTGPVNSS CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCC IVWPHSDSARRVIVKSGLNKLLQNTLNTEEPDFSNTIISGVGNDKVESLIDHIEQSVYKN EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC QMDDEVEYLYGDAISETINNVGRHAYPESNASDKKWWILCDVIGDKLFVLIYDCGIGIPK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCH TVVKRNWFISSVEKFYPEQYAEAKQAPASQSKLYFFGSLKDENLIDLAMKQDVTGTLKSK HHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHC HGQGSKSIKALVSETHRGKLWIYSNKGLLTFKNVDTPVDLHTLNKGFPGTLVQWNIKIS CCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCHHHCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA