| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963260
Identifier: 157963260
GI number: 157963260
Start: 4212420
End: 4214021
Strand: Direct
Name: 157963260
Synonym: Spea_3446
Alternate gene names: NA
Gene position: 4212420-4214021 (Clockwise)
Preceding gene: 157963259
Following gene: 157963261
Centisome position: 81.41
GC content: 47.07
Gene sequence:
>1602_bases ATGCAATCAATTAAAAATCTTAGCTTTTTAGCACTAGCTTGTAGTCTCATTATCAGTGCGCTTGGTTGCCAGCAGACTCA GATAGCCTTTACGCCAAAAGCAGCCCCCAAGTTACCTGTGTTTGACAAACTAACTGGCGCACCTGAAATTGCGCCGCTTA AGTTTCAGCAAACGTCTCTGTCTAAGCTTGTGCCTGTTAGCCCTAAACTGGATTTATATCTGTTTGATGACACCCTCTCG GGCCTTAACCACCTATCTTTAGTGGCCTACAGCAAGTTGCCTATGGAAAATCTAGATGTGTTGCTACAAGCCTTTGATGA GAAAAGGGCTTGGCTAGTACAGCAATCGACACTTGCCTGCGCCGAGAGCCTGAATATCCGCCCGACCATGCACAGCCTGA CCATTAGCATTGACTGCCCCGACTCGCCAATCTTAGCCAGCGAGCTGTTGATGCAGTTTTGGCAAGCCGATGACGTTAAT CAAATGGGCAGCTTTGATGAAATAGACATAGCTAACGTACGGCGTCAGCTCAAATTGGCCAAACACATCAACGCCTACAG CGGCGCCGAAATCGATGATGTGTGGGCCAAGAAAATCTTGGGTAAGCAGCATGTTTATAATCAAGCGCTCAACGATAAAA CCCTTGCCGATGAGTTGGATTTAAGCAGCCTTAACCAAGTTAGAGACAAGATTTTAGCGCAGTCTAACTGGGCTTTTTTT GCTAATCGCAGTCTTGAACAAGACCAAGGGTTTACCTTGGCTGTGACTCAACAGTTTGAATCGTTAATGTCTATAGCGTC TAAGGCCGAACTATCAAACTCTAAAGCGAATTCCGAAGCTTATTCAGAAGCTAACTCAGAAAAAAGCACTGACTCTGCCA CTATCTCCGGCTCAGCAATAAACACCAGAACCGAAACAAGCACCAGCGCAGATATTCCTCCGAGCAATAATAACAAGACC TTATACCTTATCGATGTGCCCGGCAGCGTACAAACACAAGTGCGTATAGGCTATCCTCTGGGGAACATGCTAGATGGCAG CGATAATGATAACGATAAAAGTATCGATAGCGCTCAAGACTGTAAGCTACTGGCCAGCTGGCTTGGGCGCAGTTTCTCAG GTCGCTTATATTACGACCTACGCGAGATTCGCGGCTTAACCTATGGCATCTATGGTCGCTGCTTCGACAATCCACTATCA CGTACACTTAAGTTTTATGGCAGCACTAAACTTGAACACTCCGGTGCCTTTATTAGTGGCGTGCTCGACCATTTAGCGCT GACCACAGACTCAACAGCATCGCTTGATGAACTAACGGCGTTAAAGACCTACCTCACCAGTCAACAGATCCTGCGTCAGG CGAACTTTCGCGCCGTCGAGGCCGATACCATCAAGCAACTTATCCGCGGCGTTTCACCTGAGCAGGAGCTGGCTCAAAAC CAACGACTCAGCAAGTTAACCCCTGAGCAATTACAACAGATTGCCCGTTCGGTGTTTTTAAACACGCCTTATATCGTGAT CCGTGGTGATAGGGATAAAATAGAAGCCGACTTAAAACATAAGCTTGCCGATTGGAACATAGTCGAAGTCGTGGCTGACT AG
Upstream 100 bases:
>100_bases GGCTGGATCTGCTGCCCCCTTGGTATATTCGCGCCACTAAATCGATTCTTGAGTTGTTACCTAAAGAGATGAGCGATAGC CTTGAAGAGAGTGTAATGTG
Downstream 100 bases:
>100_bases TTTATGTGGCCATGGCCGTGACTGTTGCTGTGACTGTGACGGTTGCTGTTATGGCGATTAATCACCCGCAAAGTTCACCT TTTATTCAGCCAACAGTTGC
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: Zn-Dependent Peptidase
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MQSIKNLSFLALACSLIISALGCQQTQIAFTPKAAPKLPVFDKLTGAPEIAPLKFQQTSLSKLVPVSPKLDLYLFDDTLS GLNHLSLVAYSKLPMENLDVLLQAFDEKRAWLVQQSTLACAESLNIRPTMHSLTISIDCPDSPILASELLMQFWQADDVN QMGSFDEIDIANVRRQLKLAKHINAYSGAEIDDVWAKKILGKQHVYNQALNDKTLADELDLSSLNQVRDKILAQSNWAFF ANRSLEQDQGFTLAVTQQFESLMSIASKAELSNSKANSEAYSEANSEKSTDSATISGSAINTRTETSTSADIPPSNNNKT LYLIDVPGSVQTQVRIGYPLGNMLDGSDNDNDKSIDSAQDCKLLASWLGRSFSGRLYYDLREIRGLTYGIYGRCFDNPLS RTLKFYGSTKLEHSGAFISGVLDHLALTTDSTASLDELTALKTYLTSQQILRQANFRAVEADTIKQLIRGVSPEQELAQN QRLSKLTPEQLQQIARSVFLNTPYIVIRGDRDKIEADLKHKLADWNIVEVVAD
Sequences:
>Translated_533_residues MQSIKNLSFLALACSLIISALGCQQTQIAFTPKAAPKLPVFDKLTGAPEIAPLKFQQTSLSKLVPVSPKLDLYLFDDTLS GLNHLSLVAYSKLPMENLDVLLQAFDEKRAWLVQQSTLACAESLNIRPTMHSLTISIDCPDSPILASELLMQFWQADDVN QMGSFDEIDIANVRRQLKLAKHINAYSGAEIDDVWAKKILGKQHVYNQALNDKTLADELDLSSLNQVRDKILAQSNWAFF ANRSLEQDQGFTLAVTQQFESLMSIASKAELSNSKANSEAYSEANSEKSTDSATISGSAINTRTETSTSADIPPSNNNKT LYLIDVPGSVQTQVRIGYPLGNMLDGSDNDNDKSIDSAQDCKLLASWLGRSFSGRLYYDLREIRGLTYGIYGRCFDNPLS RTLKFYGSTKLEHSGAFISGVLDHLALTTDSTASLDELTALKTYLTSQQILRQANFRAVEADTIKQLIRGVSPEQELAQN QRLSKLTPEQLQQIARSVFLNTPYIVIRGDRDKIEADLKHKLADWNIVEVVAD >Mature_533_residues MQSIKNLSFLALACSLIISALGCQQTQIAFTPKAAPKLPVFDKLTGAPEIAPLKFQQTSLSKLVPVSPKLDLYLFDDTLS GLNHLSLVAYSKLPMENLDVLLQAFDEKRAWLVQQSTLACAESLNIRPTMHSLTISIDCPDSPILASELLMQFWQADDVN QMGSFDEIDIANVRRQLKLAKHINAYSGAEIDDVWAKKILGKQHVYNQALNDKTLADELDLSSLNQVRDKILAQSNWAFF ANRSLEQDQGFTLAVTQQFESLMSIASKAELSNSKANSEAYSEANSEKSTDSATISGSAINTRTETSTSADIPPSNNNKT LYLIDVPGSVQTQVRIGYPLGNMLDGSDNDNDKSIDSAQDCKLLASWLGRSFSGRLYYDLREIRGLTYGIYGRCFDNPLS RTLKFYGSTKLEHSGAFISGVLDHLALTTDSTASLDELTALKTYLTSQQILRQANFRAVEADTIKQLIRGVSPEQELAQN QRLSKLTPEQLQQIARSVFLNTPYIVIRGDRDKIEADLKHKLADWNIVEVVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59000; Mature: 59000
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIKNLSFLALACSLIISALGCQQTQIAFTPKAAPKLPVFDKLTGAPEIAPLKFQQTSL CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCEEECHHHH SKLVPVSPKLDLYLFDDTLSGLNHLSLVAYSKLPMENLDVLLQAFDEKRAWLVQQSTLAC HHCCCCCCCEEEEEECCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AESLNIRPTMHSLTISIDCPDSPILASELLMQFWQADDVNQMGSFDEIDIANVRRQLKLA HHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH KHINAYSGAEIDDVWAKKILGKQHVYNQALNDKTLADELDLSSLNQVRDKILAQSNWAFF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEE ANRSLEQDQGFTLAVTQQFESLMSIASKAELSNSKANSEAYSEANSEKSTDSATISGSAI ECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEECCCCC NTRTETSTSADIPPSNNNKTLYLIDVPGSVQTQVRIGYPLGNMLDGSDNDNDKSIDSAQD CCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHH CKLLASWLGRSFSGRLYYDLREIRGLTYGIYGRCFDNPLSRTLKFYGSTKLEHSGAFISG HHHHHHHHCCCCCCEEEEEHHHHCCCEEEHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH VLDHLALTTDSTASLDELTALKTYLTSQQILRQANFRAVEADTIKQLIRGVSPEQELAQN HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHH QRLSKLTPEQLQQIARSVFLNTPYIVIRGDRDKIEADLKHKLADWNIVEVVAD HHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MQSIKNLSFLALACSLIISALGCQQTQIAFTPKAAPKLPVFDKLTGAPEIAPLKFQQTSL CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCEEECHHHH SKLVPVSPKLDLYLFDDTLSGLNHLSLVAYSKLPMENLDVLLQAFDEKRAWLVQQSTLAC HHCCCCCCCEEEEEECCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AESLNIRPTMHSLTISIDCPDSPILASELLMQFWQADDVNQMGSFDEIDIANVRRQLKLA HHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH KHINAYSGAEIDDVWAKKILGKQHVYNQALNDKTLADELDLSSLNQVRDKILAQSNWAFF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEE ANRSLEQDQGFTLAVTQQFESLMSIASKAELSNSKANSEAYSEANSEKSTDSATISGSAI ECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEECCCCC NTRTETSTSADIPPSNNNKTLYLIDVPGSVQTQVRIGYPLGNMLDGSDNDNDKSIDSAQD CCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHH CKLLASWLGRSFSGRLYYDLREIRGLTYGIYGRCFDNPLSRTLKFYGSTKLEHSGAFISG HHHHHHHHCCCCCCEEEEEHHHHCCCEEEHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH VLDHLALTTDSTASLDELTALKTYLTSQQILRQANFRAVEADTIKQLIRGVSPEQELAQN HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHH QRLSKLTPEQLQQIARSVFLNTPYIVIRGDRDKIEADLKHKLADWNIVEVVAD HHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA