| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963249
Identifier: 157963249
GI number: 157963249
Start: 4200542
End: 4201819
Strand: Direct
Name: 157963249
Synonym: Spea_3435
Alternate gene names: NA
Gene position: 4200542-4201819 (Clockwise)
Preceding gene: 157963245
Following gene: 157963252
Centisome position: 81.18
GC content: 44.13
Gene sequence:
>1278_bases ATGACAGAGTCTTCTTTCGAACGCGCTAAAAGCGCCTTTATTAATGCTATCTGGGCAACGCTCGCCAGCGTGTCTCTGGG CTTAGCGTTTAAGATCTGGTTAGCCCAGTGGGTCGAAAAAAGTGACTTAGCTCTCTACCACACTGTCGTGGATATTATTT CCATGTCTCTTATTCTTCTCAGTGGCTTTCGCGCCTCCATGGTAGTGAGCTTTTCACAGACCAAGAACGATAGAGATATT ACCAATATCTTCCGTTACTCCTTGATTATTATGGTGCTGTTTACTTGGGGATTAGTCCTGCCCTACATCAAGCATCAGCT TAATATCGATGTTGAATATATTCAGTTGGTAGGCATTATTCTCGGGATGGGCTTTAAGGTTTACTTTACCAACCAGATTG GAATGTATCGCCTGTACGACATCGCCAATAAGAGTATCTGGATAGAGCCATTAGTACAGATAATACTGTTTCTTGTTTGC TACTACCTGTTAGCGCAGACCCCTACCGCCTCACTCTTTTTCAGCTTAATGCTGTCGAACTTGGCCGCTGCCGCCTATAT GTTTATCCAGCGCAGGAAGCTGATTGCCACCACGCCTTTAGCGCCGGTTCAACTCAATCCTGATATGAAAAACTTTGTCA AAAAGAGCGTGATGTCATCACTCGAGGTGGGGGCCAGTATTTTGATGGTCTACATCACTGTATTACTGACGATTGGCTAC TTCACTATAGATGAACTCGGTGACTTTCAGGTGGTGGTTCGGCCGATGATTGCCTACTTAACCATGTTGTTTGTTTTCCC GGTATATCGTTATATTTTACCTGAGCTGGCTCAGTGCATCCGCAATAAAGATCATCAGCAGATAGCACTGATAAGGCGTT GGTTTATCAAGCTAAGCCTGACAATCAGCTCGGTATTGCTCATTAGCTTACTTATGTTTCGCCATGAGCTAGTCGATTTA GTCTTCCCAGAAACATACGCAAAGGCCGCGCCTATTCTGCTGCACTTCGGCCTCTTTTTTGGCTTTATGATGCTCAATGC CTATCAGATTGCCTATATCAAATCCCATGGTTTATTCTTGCAGAGTTTGTTGATCCGTCTACTTGGTGTGGTGACACTCT TGATCATGTTTTACCTGCTAAGATTACACACCGACAATGTGGTTGCGGTGATCTTAGCCTTAGGTTGTGGTTACTTCAGT ATGTTTATCGCCTCAAGCATTATAGAGAGACGTTTGCTTAAGCAGCACAAGCTCAATCAAACTCAAGAAGTAAGCTGA
Upstream 100 bases:
>100_bases CTGCATCACAGCTTTCAGCAACAGAACTGACTCATAGGCGGTTAATGGTTAGTATTTACCGCCATGGAACATGCAGCCTT CTATCGAGTAAAGATAAATC
Downstream 100 bases:
>100_bases ATCACCAATCGATTAAGTAAAGAGTGAGGCATCGACTTACTGAGTTGGGAGCTTTAAGACTGAAAACAAAAAGAGCCGTA ACTCAGAGGATGTTACGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTESSFERAKSAFINAIWATLASVSLGLAFKIWLAQWVEKSDLALYHTVVDIISMSLILLSGFRASMVVSFSQTKNDRDI TNIFRYSLIIMVLFTWGLVLPYIKHQLNIDVEYIQLVGIILGMGFKVYFTNQIGMYRLYDIANKSIWIEPLVQIILFLVC YYLLAQTPTASLFFSLMLSNLAAAAYMFIQRRKLIATTPLAPVQLNPDMKNFVKKSVMSSLEVGASILMVYITVLLTIGY FTIDELGDFQVVVRPMIAYLTMLFVFPVYRYILPELAQCIRNKDHQQIALIRRWFIKLSLTISSVLLISLLMFRHELVDL VFPETYAKAAPILLHFGLFFGFMMLNAYQIAYIKSHGLFLQSLLIRLLGVVTLLIMFYLLRLHTDNVVAVILALGCGYFS MFIASSIIERRLLKQHKLNQTQEVS
Sequences:
>Translated_425_residues MTESSFERAKSAFINAIWATLASVSLGLAFKIWLAQWVEKSDLALYHTVVDIISMSLILLSGFRASMVVSFSQTKNDRDI TNIFRYSLIIMVLFTWGLVLPYIKHQLNIDVEYIQLVGIILGMGFKVYFTNQIGMYRLYDIANKSIWIEPLVQIILFLVC YYLLAQTPTASLFFSLMLSNLAAAAYMFIQRRKLIATTPLAPVQLNPDMKNFVKKSVMSSLEVGASILMVYITVLLTIGY FTIDELGDFQVVVRPMIAYLTMLFVFPVYRYILPELAQCIRNKDHQQIALIRRWFIKLSLTISSVLLISLLMFRHELVDL VFPETYAKAAPILLHFGLFFGFMMLNAYQIAYIKSHGLFLQSLLIRLLGVVTLLIMFYLLRLHTDNVVAVILALGCGYFS MFIASSIIERRLLKQHKLNQTQEVS >Mature_424_residues TESSFERAKSAFINAIWATLASVSLGLAFKIWLAQWVEKSDLALYHTVVDIISMSLILLSGFRASMVVSFSQTKNDRDIT NIFRYSLIIMVLFTWGLVLPYIKHQLNIDVEYIQLVGIILGMGFKVYFTNQIGMYRLYDIANKSIWIEPLVQIILFLVCY YLLAQTPTASLFFSLMLSNLAAAAYMFIQRRKLIATTPLAPVQLNPDMKNFVKKSVMSSLEVGASILMVYITVLLTIGYF TIDELGDFQVVVRPMIAYLTMLFVFPVYRYILPELAQCIRNKDHQQIALIRRWFIKLSLTISSVLLISLLMFRHELVDLV FPETYAKAAPILLHFGLFFGFMMLNAYQIAYIKSHGLFLQSLLIRLLGVVTLLIMFYLLRLHTDNVVAVILALGCGYFSM FIASSIIERRLLKQHKLNQTQEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48657; Mature: 48526
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESSFERAKSAFINAIWATLASVSLGLAFKIWLAQWVEKSDLALYHTVVDIISMSLILL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SGFRASMVVSFSQTKNDRDITNIFRYSLIIMVLFTWGLVLPYIKHQLNIDVEYIQLVGII HCCHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LGMGFKVYFTNQIGMYRLYDIANKSIWIEPLVQIILFLVCYYLLAQTPTASLFFSLMLSN HHCCCEEEEECCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAAAAYMFIQRRKLIATTPLAPVQLNPDMKNFVKKSVMSSLEVGASILMVYITVLLTIGY HHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTIDELGDFQVVVRPMIAYLTMLFVFPVYRYILPELAQCIRNKDHQQIALIRRWFIKLSL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TISSVLLISLLMFRHELVDLVFPETYAKAAPILLHFGLFFGFMMLNAYQIAYIKSHGLFL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH QSLLIRLLGVVTLLIMFYLLRLHTDNVVAVILALGCGYFSMFIASSIIERRLLKQHKLNQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TQEVS CCCCC >Mature Secondary Structure TESSFERAKSAFINAIWATLASVSLGLAFKIWLAQWVEKSDLALYHTVVDIISMSLILL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SGFRASMVVSFSQTKNDRDITNIFRYSLIIMVLFTWGLVLPYIKHQLNIDVEYIQLVGII HCCHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LGMGFKVYFTNQIGMYRLYDIANKSIWIEPLVQIILFLVCYYLLAQTPTASLFFSLMLSN HHCCCEEEEECCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAAAAYMFIQRRKLIATTPLAPVQLNPDMKNFVKKSVMSSLEVGASILMVYITVLLTIGY HHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTIDELGDFQVVVRPMIAYLTMLFVFPVYRYILPELAQCIRNKDHQQIALIRRWFIKLSL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TISSVLLISLLMFRHELVDLVFPETYAKAAPILLHFGLFFGFMMLNAYQIAYIKSHGLFL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH QSLLIRLLGVVTLLIMFYLLRLHTDNVVAVILALGCGYFSMFIASSIIERRLLKQHKLNQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TQEVS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA