| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963217
Identifier: 157963217
GI number: 157963217
Start: 4157423
End: 4157941
Strand: Direct
Name: 157963217
Synonym: Spea_3403
Alternate gene names: NA
Gene position: 4157423-4157941 (Clockwise)
Preceding gene: 157963216
Following gene: 157963218
Centisome position: 80.34
GC content: 39.88
Gene sequence:
>519_bases ATGCATATCCTATTTAGGGCGAGTTCTATATTGTTTACTACTGGGTGGCTGTTGTTATCGATAAACCTGCACGCTACCTC AACAACTTCTATTGCTACCAGTACTACTCCTAATACTGCTCCTAGTACAGTTTTAGTAACCATTGAACTCAATAAATATC TAGGTGGCACTCAGGGCAAACTCAATAATAAGCCAGCGCTCAATTTCAAGTTTACTGACACCAATGGTAGCGCTAACAAT ACTTGTAGCATTATCACCACTGATAACTACCTTAGGCACTCTAAAAACCGCTTAGAGAATATCAACCTCAGTGAATCTAA TTTCTACTTTGATTGTCAGTGGGACGGCACTTACTATTTTCTATCTAATCGGGTCAAAACCTACGCAGAGGTCATTATTA AGCAGCCCGATAGTCAATTTCCGATGTCGATGCATATAGAAGCTAAACTCGTTAGCCTTACGGGTGAACAAGCAAATATC GTTAGTGGTGACATTTCACTAAGAAGACAAGCCAAATAG
Upstream 100 bases:
>100_bases AATCTTAAACTTGCTGAATAAGCCATACAAGTGCATTATCAATGCGTAAATAATGCACAGACAAAATAGATATAAAATAC TAACTAGCAAGGAAAGCACC
Downstream 100 bases:
>100_bases GTTTAACCCTCTAATTAAGTACTGGGTTAATAAGCGCTAAATTAATAAGTAAAATCATTCACAAGCTGACGTCTGCTTTA TTTGTGTAAAGTGACAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MHILFRASSILFTTGWLLLSINLHATSTTSIATSTTPNTAPSTVLVTIELNKYLGGTQGKLNNKPALNFKFTDTNGSANN TCSIITTDNYLRHSKNRLENINLSESNFYFDCQWDGTYYFLSNRVKTYAEVIIKQPDSQFPMSMHIEAKLVSLTGEQANI VSGDISLRRQAK
Sequences:
>Translated_172_residues MHILFRASSILFTTGWLLLSINLHATSTTSIATSTTPNTAPSTVLVTIELNKYLGGTQGKLNNKPALNFKFTDTNGSANN TCSIITTDNYLRHSKNRLENINLSESNFYFDCQWDGTYYFLSNRVKTYAEVIIKQPDSQFPMSMHIEAKLVSLTGEQANI VSGDISLRRQAK >Mature_172_residues MHILFRASSILFTTGWLLLSINLHATSTTSIATSTTPNTAPSTVLVTIELNKYLGGTQGKLNNKPALNFKFTDTNGSANN TCSIITTDNYLRHSKNRLENINLSESNFYFDCQWDGTYYFLSNRVKTYAEVIIKQPDSQFPMSMHIEAKLVSLTGEQANI VSGDISLRRQAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19191; Mature: 19191
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHILFRASSILFTTGWLLLSINLHATSTTSIATSTTPNTAPSTVLVTIELNKYLGGTQGK CEEEEECCEEEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCC LNNKPALNFKFTDTNGSANNTCSIITTDNYLRHSKNRLENINLSESNFYFDCQWDGTYYF CCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEE LSNRVKTYAEVIIKQPDSQFPMSMHIEAKLVSLTGEQANIVSGDISLRRQAK ECCCHHHEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEECCEEEEECCC >Mature Secondary Structure MHILFRASSILFTTGWLLLSINLHATSTTSIATSTTPNTAPSTVLVTIELNKYLGGTQGK CEEEEECCEEEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCC LNNKPALNFKFTDTNGSANNTCSIITTDNYLRHSKNRLENINLSESNFYFDCQWDGTYYF CCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEE LSNRVKTYAEVIIKQPDSQFPMSMHIEAKLVSLTGEQANIVSGDISLRRQAK ECCCHHHEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA