| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ahcY [H]
Identifier: 157963215
GI number: 157963215
Start: 4155333
End: 4156553
Strand: Direct
Name: ahcY [H]
Synonym: Spea_3401
Alternate gene names: 157963215
Gene position: 4155333-4156553 (Clockwise)
Preceding gene: 157963213
Following gene: 157963216
Centisome position: 80.3
GC content: 46.03
Gene sequence:
>1221_bases ATGACAACAATAACGACAAAACCTCAAATTGATTGTGAAATCGCAGATATCAGTCTCGCCCCATTAGGCAGAAAACGTAT TGACTGGGCTCGCGCCCATATGCCGATTATGCGTAATATTATTGAACGCTTTGAAAAAGAGCAGCCATTCAAAGGCCTAA CTATCGGGATTTGTTTACATGTAGAGGCAAAAACAGGAGTTTGGCTTGAGGCCTTAACCAAAGGTGGGGCAAGGGTGGCA ATAACCGGCTCACCAGGCACAACGCAAGATGAAACCGTCGCAGCCATTGTTGAAGATTACGGTGTGCATGTTTACAGCCA ACGCAATGAAAGCTTTGAAGATCATCTGCGGTATTGCCAAAAAGTGCTCGACCACCAGCCAAATATTATCTCTGATAATG GCGCAGATCTACATGAATTGTTGTTTACCCTGCCACAAAACCAACACCTGATAGATCAGTTATTAGGAGCCACAGAGGAG ACAACCACAGGGGCTAACCGCCTACGTGAAGACTTTAAATCAGATAAATTTGCCACCTTAATCATTAATGATACCCAAGC AAAACGCATTATTGAAAACCGCTATGGGGTGGGCTCATCGGTCGTTGACGGCTTAATGCGTGCCACTAACGTGATGCTGC ATGGCAAAAAAGTGGTGGTTATTGGCTATGGATATTGCGGCAGCGGCACAGCACAGAGACTTAGAGGCATGGGGGCCCAT GTGACGGTGGTTGAGCCTAATCCATTAACCAGATTAGAAGCGCACATGGAAGGCTTTTATACCGCATCAATAGAAGATGC ACTGCCTAATGCCGACATGGTGATCACCATTACCGGCCGCGACAATGTACTCGACAAGCAACACTTTGAGCTGATGGCTA ACAATGTGATTATTGCTAATGCAGGCCACTTTCAGCGAGAAATTAATCTACCAGCATTGGCGGAAATGGCCGAGTCTGTT GAGGCTATCCGCCCTCAAGTCAAAGGTTATAAGCTAAACGATAAGACGCTATTTGTATTGTCTGACGCAAATTTAGTCAA CTTGGCAGCCGGAGATGGTAACCCTATTGAGATCATGGATCTCGGCTTAGCACTACAATCGTTAAGCCTTGAGCGTATTG CTCTAGGCGTTAAGTCGTTATCCCCTATTCCTCAGCCCGTGCCCTATGATATTGAATTAGATGTTGCAGCACTCGCCTGC CAGCACTGGATTAATCACTAA
Upstream 100 bases:
>100_bases ATTCATGCTTTATTGGAAAGAATATTGTTCAATATGTGAAATTGTTAAAACATGCCGCTCAATCAATGATGAATAAACAC TATTAAGTTGGATCTTCATC
Downstream 100 bases:
>100_bases GCATTATACTTAGCAGGAAGCGCGTGTCTTCCTGCTTTGACCATAAAAACCTTTGCCGTATTCAAACCGTATTACCTGCG CTGAACTATAATTATAGGTA
Product: adenosylhomocysteinase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTTITTKPQIDCEIADISLAPLGRKRIDWARAHMPIMRNIIERFEKEQPFKGLTIGICLHVEAKTGVWLEALTKGGARVA ITGSPGTTQDETVAAIVEDYGVHVYSQRNESFEDHLRYCQKVLDHQPNIISDNGADLHELLFTLPQNQHLIDQLLGATEE TTTGANRLREDFKSDKFATLIINDTQAKRIIENRYGVGSSVVDGLMRATNVMLHGKKVVVIGYGYCGSGTAQRLRGMGAH VTVVEPNPLTRLEAHMEGFYTASIEDALPNADMVITITGRDNVLDKQHFELMANNVIIANAGHFQREINLPALAEMAESV EAIRPQVKGYKLNDKTLFVLSDANLVNLAAGDGNPIEIMDLGLALQSLSLERIALGVKSLSPIPQPVPYDIELDVAALAC QHWINH
Sequences:
>Translated_406_residues MTTITTKPQIDCEIADISLAPLGRKRIDWARAHMPIMRNIIERFEKEQPFKGLTIGICLHVEAKTGVWLEALTKGGARVA ITGSPGTTQDETVAAIVEDYGVHVYSQRNESFEDHLRYCQKVLDHQPNIISDNGADLHELLFTLPQNQHLIDQLLGATEE TTTGANRLREDFKSDKFATLIINDTQAKRIIENRYGVGSSVVDGLMRATNVMLHGKKVVVIGYGYCGSGTAQRLRGMGAH VTVVEPNPLTRLEAHMEGFYTASIEDALPNADMVITITGRDNVLDKQHFELMANNVIIANAGHFQREINLPALAEMAESV EAIRPQVKGYKLNDKTLFVLSDANLVNLAAGDGNPIEIMDLGLALQSLSLERIALGVKSLSPIPQPVPYDIELDVAALAC QHWINH >Mature_405_residues TTITTKPQIDCEIADISLAPLGRKRIDWARAHMPIMRNIIERFEKEQPFKGLTIGICLHVEAKTGVWLEALTKGGARVAI TGSPGTTQDETVAAIVEDYGVHVYSQRNESFEDHLRYCQKVLDHQPNIISDNGADLHELLFTLPQNQHLIDQLLGATEET TTGANRLREDFKSDKFATLIINDTQAKRIIENRYGVGSSVVDGLMRATNVMLHGKKVVVIGYGYCGSGTAQRLRGMGAHV TVVEPNPLTRLEAHMEGFYTASIEDALPNADMVITITGRDNVLDKQHFELMANNVIIANAGHFQREINLPALAEMAESVE AIRPQVKGYKLNDKTLFVLSDANLVNLAAGDGNPIEIMDLGLALQSLSLERIALGVKSLSPIPQPVPYDIELDVAALACQ HWINH
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=364, Percent_Identity=35.7142857142857, Blast_Score=211, Evalue=7e-55, Organism=Homo sapiens, GI239937451, Length=343, Percent_Identity=34.9854227405248, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI298286489, Length=371, Percent_Identity=31.8059299191375, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI195539349, Length=371, Percent_Identity=31.8059299191375, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI195539337, Length=371, Percent_Identity=31.8059299191375, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI24308043, Length=371, Percent_Identity=31.8059299191375, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI21361647, Length=363, Percent_Identity=31.404958677686, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17506425, Length=380, Percent_Identity=37.3684210526316, Blast_Score=219, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6320882, Length=378, Percent_Identity=35.4497354497354, Blast_Score=206, Evalue=5e-54, Organism=Drosophila melanogaster, GI24642172, Length=382, Percent_Identity=34.5549738219895, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24656245, Length=356, Percent_Identity=32.8651685393258, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI45553385, Length=350, Percent_Identity=32.2857142857143, Blast_Score=174, Evalue=7e-44, Organism=Drosophila melanogaster, GI45553387, Length=350, Percent_Identity=32.2857142857143, Blast_Score=174, Evalue=8e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 44686; Mature: 44555
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITTKPQIDCEIADISLAPLGRKRIDWARAHMPIMRNIIERFEKEQPFKGLTIGICLH CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE VEAKTGVWLEALTKGGARVAITGSPGTTQDETVAAIVEDYGVHVYSQRNESFEDHLRYCQ EECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH KVLDHQPNIISDNGADLHELLFTLPQNQHLIDQLLGATEETTTGANRLREDFKSDKFATL HHHCCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEE IINDTQAKRIIENRYGVGSSVVDGLMRATNVMLHGKKVVVIGYGYCGSGTAQRLRGMGAH EEECHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHCCCCE VTVVEPNPLTRLEAHMEGFYTASIEDALPNADMVITITGRDNVLDKQHFELMANNVIIAN EEEECCCCCHHHHHHHCCEEEEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEE AGHFQREINLPALAEMAESVEAIRPQVKGYKLNDKTLFVLSDANLVNLAAGDGNPIEIMD CCCCCEECCCHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCEEEEECCCCCCEEEEE LGLALQSLSLERIALGVKSLSPIPQPVPYDIELDVAALACQHWINH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure TTITTKPQIDCEIADISLAPLGRKRIDWARAHMPIMRNIIERFEKEQPFKGLTIGICLH CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE VEAKTGVWLEALTKGGARVAITGSPGTTQDETVAAIVEDYGVHVYSQRNESFEDHLRYCQ EECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH KVLDHQPNIISDNGADLHELLFTLPQNQHLIDQLLGATEETTTGANRLREDFKSDKFATL HHHCCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEE IINDTQAKRIIENRYGVGSSVVDGLMRATNVMLHGKKVVVIGYGYCGSGTAQRLRGMGAH EEECHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHCCCCE VTVVEPNPLTRLEAHMEGFYTASIEDALPNADMVITITGRDNVLDKQHFELMANNVIIAN EEEECCCCCHHHHHHHCCEEEEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEE AGHFQREINLPALAEMAESVEAIRPQVKGYKLNDKTLFVLSDANLVNLAAGDGNPIEIMD CCCCCEECCCHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCEEEEECCCCCCEEEEE LGLALQSLSLERIALGVKSLSPIPQPVPYDIELDVAALACQHWINH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]