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The map label for this gene is tonB [H]

Identifier: 157963144

GI number: 157963144

Start: 4072167

End: 4072925

Strand: Direct

Name: tonB [H]

Synonym: Spea_3328

Alternate gene names: 157963144

Gene position: 4072167-4072925 (Clockwise)

Preceding gene: 157963138

Following gene: 157963145

Centisome position: 78.7

GC content: 49.41

Gene sequence:

>759_bases
ATGACTCCTAAACGTTATTTTGCTTTTGGTTGTTTAACGATTTTAATCCAAGGCGGCGTACTCGCCTCACAAAACAGCCA
GCCAGATCCGCGACTAAACTCTGGCTCTGCGATGGGCTCTAGTCAGGCAGTCAGCATCTCTATTGCAATGCAAGCCAGCC
AAGCTGTAAAAACGCCCGAGCAGGTTCAAGCACCTGTTGAAACCCAAGCTAAGCCGACGACTCAAGCTAATCCTGTTGCT
CAGACCATTGCGAAACCCCAGCCAATTGCCAAGACTAACGCCATTGCCCAAACCCAAGCTAAACCGCTCTCCCCCAAGAT
GGCTGTAACTGACAAGCCAAAAACGCTAAAAGAGGTAGCGAAAAAGTTGGATCCAATCAAGCCAATCGAAAAAACACAAG
AAAGTGCCGCTGAAGTACAAACAGAGCAACTTTCTCACAATCAACCAAAGGCTGATGCCAAGCAAGGTGTAAGCAAGCAA
GCCGTTGCATTAAGCCAACCCACTTTTGCCACACCACCGAGCCAACCCCACTACCCAAAAAAAGCACGTAAAAAGGGATT
TCAAGGCACTGCGACCGTGGAGGTGATGTTTAACCAGCTTGGCGAGCAACTCTCGCTCACCTTGGTGGATAGCTCCGGTT
ACCGATTATTAGACAAAGCCGCGTTAAACGCTGTCGAGAAGTGGCAGTTTGCCGCACCTAGCCCACAAACCGCCTACGCC
TACACTGTGCGAGTACCGGTGAAGTTTGCATTGAATTAA

Upstream 100 bases:

>100_bases
CTTTTATGTCAACTTTGTAAAGATGTGGGCAATGAGGTAGCGTGAAATACAATTGATGAGTCAGTACTAATATTATTCTA
TTGAGTAAGAATTTTCGGCC

Downstream 100 bases:

>100_bases
TGGCGGACAGAATCGAGCCATGGGTGACTTAGCTAAGTAGCGAATGCCTTAGTTAATGCACAAAAGCTTACAGGGAAAGT
AAGGCTAACAATACGTGTTT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTPKRYFAFGCLTILIQGGVLASQNSQPDPRLNSGSAMGSSQAVSISIAMQASQAVKTPEQVQAPVETQAKPTTQANPVA
QTIAKPQPIAKTNAIAQTQAKPLSPKMAVTDKPKTLKEVAKKLDPIKPIEKTQESAAEVQTEQLSHNQPKADAKQGVSKQ
AVALSQPTFATPPSQPHYPKKARKKGFQGTATVEVMFNQLGEQLSLTLVDSSGYRLLDKAALNAVEKWQFAAPSPQTAYA
YTVRVPVKFALN

Sequences:

>Translated_252_residues
MTPKRYFAFGCLTILIQGGVLASQNSQPDPRLNSGSAMGSSQAVSISIAMQASQAVKTPEQVQAPVETQAKPTTQANPVA
QTIAKPQPIAKTNAIAQTQAKPLSPKMAVTDKPKTLKEVAKKLDPIKPIEKTQESAAEVQTEQLSHNQPKADAKQGVSKQ
AVALSQPTFATPPSQPHYPKKARKKGFQGTATVEVMFNQLGEQLSLTLVDSSGYRLLDKAALNAVEKWQFAAPSPQTAYA
YTVRVPVKFALN
>Mature_251_residues
TPKRYFAFGCLTILIQGGVLASQNSQPDPRLNSGSAMGSSQAVSISIAMQASQAVKTPEQVQAPVETQAKPTTQANPVAQ
TIAKPQPIAKTNAIAQTQAKPLSPKMAVTDKPKTLKEVAKKLDPIKPIEKTQESAAEVQTEQLSHNQPKADAKQGVSKQA
VALSQPTFATPPSQPHYPKKARKKGFQGTATVEVMFNQLGEQLSLTLVDSSGYRLLDKAALNAVEKWQFAAPSPQTAYAY
TVRVPVKFALN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 26990; Mature: 26859

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKRYFAFGCLTILIQGGVLASQNSQPDPRLNSGSAMGSSQAVSISIAMQASQAVKTPE
CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHCCHH
QVQAPVETQAKPTTQANPVAQTIAKPQPIAKTNAIAQTQAKPLSPKMAVTDKPKTLKEVA
HHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHH
KKLDPIKPIEKTQESAAEVQTEQLSHNQPKADAKQGVSKQAVALSQPTFATPPSQPHYPK
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHEECCCCCCCCCCCCCCCH
KARKKGFQGTATVEVMFNQLGEQLSLTLVDSSGYRLLDKAALNAVEKWQFAAPSPQTAYA
HHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
YTVRVPVKFALN
EEEEEEEEEECC
>Mature Secondary Structure 
TPKRYFAFGCLTILIQGGVLASQNSQPDPRLNSGSAMGSSQAVSISIAMQASQAVKTPE
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHCCHH
QVQAPVETQAKPTTQANPVAQTIAKPQPIAKTNAIAQTQAKPLSPKMAVTDKPKTLKEVA
HHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHH
KKLDPIKPIEKTQESAAEVQTEQLSHNQPKADAKQGVSKQAVALSQPTFATPPSQPHYPK
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHEECCCCCCCCCCCCCCCH
KARKKGFQGTATVEVMFNQLGEQLSLTLVDSSGYRLLDKAALNAVEKWQFAAPSPQTAYA
HHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
YTVRVPVKFALN
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9781885; 10952301 [H]