| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963135
Identifier: 157963135
GI number: 157963135
Start: 4059695
End: 4060237
Strand: Direct
Name: 157963135
Synonym: Spea_3319
Alternate gene names: NA
Gene position: 4059695-4060237 (Clockwise)
Preceding gene: 157963133
Following gene: 157963136
Centisome position: 78.45
GC content: 43.09
Gene sequence:
>543_bases ATGGATAGCATCTCTATTTCCATTCTGGTCTTTTTCAGTCTACTTTGCTTGAGCATTGCTTCGCTTATCTGGCTAAAAAT CAAAGGCAAGATCATCCCTAATGGCGTGATTGTGGTACTTGGTTTTATGGCAATGTGTGTCGGCAGTGTATTTGCTTTTA TTAACTACGGCGAAGATTACGACGCCTACAAAAAGCTGCATTGGCAAACCTTAACACCTAGTCAAATTCAACCTCTTGTA GACCAAGGTTACACTGTATTTGTTGATGTAACGGCAGATTGGTGCAACATCTGTTATGCCAACAAAGTTGGTGTTACCCA CAGAGAAAAAATAGTTAACGCCCTAGCTGCAGACAATATTATTTTAATGTTGGGTGACTGGACTGAGCCTAATGCAGTCG TTGAAGATTATATGCGAATGCAAGGTCGCGGCGGCACGCCTTATAATAAAGTCTACGGCCCTGGAGCACCTGACGGCATC ATACTGCCCACCCAGCTGACGATGGAATCTGTTCTACAAGGGCTACAAAAGGCTAAAATCTAA
Upstream 100 bases:
>100_bases TTTCATTTAACTGATGCAGAATAGGTCATTAATTGCGTTTAAGCTGGCTACGCACAGTTATCACAAATCAATAGTCATTG TTTCATTTTATGGAGTTTTC
Downstream 100 bases:
>100_bases AGGTCATCAATTTAGGTCTCCTATCGCTGCGTTACAATAAAAACAATAAGGTCACGTTATTTCGTGGCCTTATTTTTTTA GCTATCACTTTTGCGTATAC
Product: thiol:disulfide interchange protein
Products: NA
Alternate protein names: ThiolDisulfide Interchange Protein; Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein DsbD; C-Type Cytochrome Biogenesis Protein; Metal Resistance Protein; ThiolDisulfide Interchange; Protein-Disulfide Reductase; Copper-Sensitivity B Suppressor; ThiolDisulfide Interchange Protein-Like Protein; ThiODisulfide Interchange Protein; Cytochrome C Biogenesis Transmembrane Protein; Thioredoxin DsbD Family; Thiol-Disulfide Interchange Protein-Like Protein; Copper-Sensitivity Suppressor B Protein; Thioredoxin-Like Protein; Copper Sensitivity Suppressor Membrane Protein B; Thiol-Disulfide Interchange Protein DsbD-Like Protein; DsbD Family Thioredoxin
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDYDAYKKLHWQTLTPSQIQPLV DQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNIILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGI ILPTQLTMESVLQGLQKAKI
Sequences:
>Translated_180_residues MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDYDAYKKLHWQTLTPSQIQPLV DQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNIILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGI ILPTQLTMESVLQGLQKAKI >Mature_180_residues MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDYDAYKKLHWQTLTPSQIQPLV DQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNIILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGI ILPTQLTMESVLQGLQKAKI
Specific function: Unknown
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19867; Mature: 19867
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCH DAYKKLHWQTLTPSQIQPLVDQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNI HHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHCCE ILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGIILPTQLTMESVLQGLQKAKI EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCH DAYKKLHWQTLTPSQIQPLVDQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNI HHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHCCE ILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGIILPTQLTMESVLQGLQKAKI EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA