| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is prs [H]
Identifier: 157962947
GI number: 157962947
Start: 3833116
End: 3834090
Strand: Direct
Name: prs [H]
Synonym: Spea_3130
Alternate gene names: 157962947
Gene position: 3833116-3834090 (Clockwise)
Preceding gene: 157962946
Following gene: 157962953
Centisome position: 74.08
GC content: 45.64
Gene sequence:
>975_bases ATGAAGCATACGCCTGAGGTTCCTACAGTGCCTGACATTAAACTTTTTGCCGGTAACGCTACACCTAGTCTCGCTAAGAA GATAGCCGATCGTCTATTTTGTAAACTTGGAGACGCAGAAGTAGGCGTTTTCAGTGACGGCGAAATCAGTGTCCAAATTA ATGAAAATGTACGTGGTGCGGATGTATTCATCATTCAATCTACTTGCGCTCCTACTAACGATAACCTAATGGAACTTATC GTTATGGTTGACGCGCTTCGCCGTGCATCAGCTGGTCGTATTACAGCGGTTATTCCTTACTTTGGTTACGCGCGTCAGGA CCGTCGAGTTCGTAGTGCTCGTGTACCGATTACAGCTAAAGTTGTTGCCGATTTCCTATCAAGCGTTGGTGTTGACCGCG TATTGACATGTGATCTACACGCAGAGCAAATCCAAGGTTTCTTTGACGTTCCAGTTGATAACGTATTTGGTAGCCCTGTT CTACTTGAAGACATGTTAGCTAAGAACCTAGAAAACCCTGTTGTTGTTTCTCCTGATATCGGTGGCGTTGTGCGCGCTCG CGCAGTCGCTAAGCTACTTGATGACTCTGATTTAGCAATTATCGATAAGCGTCGCCCACAAGCGAACGTTGCTCAGGTTA TGCATATCATTGGTGACGTTCAAGGCCGTGACTGTATCATCGTTGATGATATGATCGACACTGGCGGTACGCTATGTAAA GCTGCTGAAGCACTTAAAGAGCACGGTGCAAACCGCGTATTCGCTTACGCAACTCACCCTGTTTTCTCTGGCAACGCTGC TAAGAACATCGCTGAGTCTGTAATCGATGAAGTAATCGTAACCGATACGATTCCATTGAGCCCAGAAATTGCTGCTCTAG ACAAAGTTTCACAGTTAACTATGTCTACAGTTATGGCTGAAGCTATTCGCCGTGTAAGCAACGAAGAATCAATCTCTGCA ATGTTCAAGCACTAA
Upstream 100 bases:
>100_bases CAAGGCTTTGTTGCGAAAGGGGCAAATATATCACCGTTGATGCTGAGATTAGCTCAGTGTTAACCACATTCTGGGATATT TTTAAATCCCAGCCACAATC
Downstream 100 bases:
>100_bases TTCATAGCAGACGCTAAAAGTTAGGCTCGTAAAAGAGAGAAAAAACGCACTCCTTGAGTGCGTTTTTTTATGCCTAAACA ACTCTATTCAATATCTTCGA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKHTPEVPTVPDIKLFAGNATPSLAKKIADRLFCKLGDAEVGVFSDGEISVQINENVRGADVFIIQSTCAPTNDNLMELI VMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPV LLEDMLAKNLENPVVVSPDIGGVVRARAVAKLLDDSDLAIIDKRRPQANVAQVMHIIGDVQGRDCIIVDDMIDTGGTLCK AAEALKEHGANRVFAYATHPVFSGNAAKNIAESVIDEVIVTDTIPLSPEIAALDKVSQLTMSTVMAEAIRRVSNEESISA MFKH
Sequences:
>Translated_324_residues MKHTPEVPTVPDIKLFAGNATPSLAKKIADRLFCKLGDAEVGVFSDGEISVQINENVRGADVFIIQSTCAPTNDNLMELI VMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPV LLEDMLAKNLENPVVVSPDIGGVVRARAVAKLLDDSDLAIIDKRRPQANVAQVMHIIGDVQGRDCIIVDDMIDTGGTLCK AAEALKEHGANRVFAYATHPVFSGNAAKNIAESVIDEVIVTDTIPLSPEIAALDKVSQLTMSTVMAEAIRRVSNEESISA MFKH >Mature_324_residues MKHTPEVPTVPDIKLFAGNATPSLAKKIADRLFCKLGDAEVGVFSDGEISVQINENVRGADVFIIQSTCAPTNDNLMELI VMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPV LLEDMLAKNLENPVVVSPDIGGVVRARAVAKLLDDSDLAIIDKRRPQANVAQVMHIIGDVQGRDCIIVDDMIDTGGTLCK AAEALKEHGANRVFAYATHPVFSGNAAKNIAESVIDEVIVTDTIPLSPEIAALDKVSQLTMSTVMAEAIRRVSNEESISA MFKH
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=318, Percent_Identity=47.4842767295598, Blast_Score=292, Evalue=3e-79, Organism=Homo sapiens, GI4506129, Length=318, Percent_Identity=46.5408805031447, Blast_Score=289, Evalue=3e-78, Organism=Homo sapiens, GI84875539, Length=320, Percent_Identity=46.25, Blast_Score=288, Evalue=5e-78, Organism=Homo sapiens, GI28557709, Length=318, Percent_Identity=46.5408805031447, Blast_Score=285, Evalue=4e-77, Organism=Homo sapiens, GI4506133, Length=360, Percent_Identity=36.3888888888889, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI194018537, Length=345, Percent_Identity=36.231884057971, Blast_Score=188, Evalue=5e-48, Organism=Homo sapiens, GI310128524, Length=145, Percent_Identity=31.7241379310345, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI310115209, Length=145, Percent_Identity=31.7241379310345, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI310118259, Length=145, Percent_Identity=31.7241379310345, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI310119946, Length=145, Percent_Identity=31.7241379310345, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI1787458, Length=315, Percent_Identity=83.4920634920635, Blast_Score=547, Evalue=1e-157, Organism=Caenorhabditis elegans, GI25149168, Length=317, Percent_Identity=45.1104100946372, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17554702, Length=317, Percent_Identity=45.1104100946372, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71989924, Length=317, Percent_Identity=45.1104100946372, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17554704, Length=312, Percent_Identity=44.8717948717949, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17570245, Length=337, Percent_Identity=34.1246290801187, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320946, Length=315, Percent_Identity=46.031746031746, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6319403, Length=316, Percent_Identity=45.253164556962, Blast_Score=265, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6321776, Length=314, Percent_Identity=46.8152866242038, Blast_Score=262, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6322667, Length=203, Percent_Identity=41.3793103448276, Blast_Score=143, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6324511, Length=115, Percent_Identity=43.4782608695652, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI21355239, Length=318, Percent_Identity=45.5974842767296, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI45551540, Length=340, Percent_Identity=42.6470588235294, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24651458, Length=357, Percent_Identity=34.453781512605, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24651456, Length=357, Percent_Identity=34.453781512605, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI281362873, Length=357, Percent_Identity=34.453781512605, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24651454, Length=357, Percent_Identity=34.453781512605, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24651462, Length=184, Percent_Identity=37.5, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI24651464, Length=184, Percent_Identity=37.5, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI45552010, Length=184, Percent_Identity=37.5, Blast_Score=127, Evalue=9e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34948; Mature: 34948
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTPEVPTVPDIKLFAGNATPSLAKKIADRLFCKLGDAEVGVFSDGEISVQINENVRGA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCC DVFIIQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAK EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHH VVADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLLEDMLAKNLENPVVVSPDI HHHHHHHHCCCCEEEEECCCHHHCCCEECCCHHHHCCCHHHHHHHHHHCCCCCEEECCCC GGVVRARAVAKLLDDSDLAIIDKRRPQANVAQVMHIIGDVQGRDCIIVDDMIDTGGTLCK CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH AAEALKEHGANRVFAYATHPVFSGNAAKNIAESVIDEVIVTDTIPLSPEIAALDKVSQLT HHHHHHHCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH MSTVMAEAIRRVSNEESISAMFKH HHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MKHTPEVPTVPDIKLFAGNATPSLAKKIADRLFCKLGDAEVGVFSDGEISVQINENVRGA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCC DVFIIQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAK EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHH VVADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLLEDMLAKNLENPVVVSPDI HHHHHHHHCCCCEEEEECCCHHHCCCEECCCHHHHCCCHHHHHHHHHHCCCCCEEECCCC GGVVRARAVAKLLDDSDLAIIDKRRPQANVAQVMHIIGDVQGRDCIIVDDMIDTGGTLCK CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH AAEALKEHGANRVFAYATHPVFSGNAAKNIAESVIDEVIVTDTIPLSPEIAALDKVSQLT HHHHHHHCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH MSTVMAEAIRRVSNEESISAMFKH HHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]