| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962751
Identifier: 157962751
GI number: 157962751
Start: 3593759
End: 3594796
Strand: Direct
Name: 157962751
Synonym: Spea_2933
Alternate gene names: NA
Gene position: 3593759-3594796 (Clockwise)
Preceding gene: 157962747
Following gene: 157962752
Centisome position: 69.45
GC content: 43.16
Gene sequence:
>1038_bases ATGACCTCAGCTAGAAGAACTCTCATCGATGCTGAAACAACGCCTTTCTATCACATCATAAACCGTTGCGTAAGAAGAGC TTATCTCTGCGGTAATGATGAACTTACAGGTAAAAGTTTTGAGCATAGACGCGGTTGGATTGTCGATAAAATCAAAGCGC TTTCAAACATATTCTGTATCGATATCTGCGCCTATGCAGTCATGAATAATCACTATCATTTAGTCCTTAAGATTGACATC GATAAGTCTAAGTCCCTGACGAACCACGACATCATTACCCGATGGAATCAGGTCACTAAGGGGCATGAAGTCGCAACTAA ATATTTGAATGGCGACACCTTGATTGAAGGTGAACGTATGCTCCTCGATGGTTTACTTACTGAGTGGAATGAACGTTTAT CGAGTATCTCTTGGTTTATGCGGTGCCTTAATGAAGATATTGCCCGCAGGGCTAATCGCGAAGATGAGTGTAAAGGGGCT TTCTGGGAGGGACGCTTCAAATCTCAGGCGCTACTTGATGAACAAGCACTGTTAGCTTGCATGATGTATGTGGATTTAAA TCCTATCAGAGCAGGAATTGCCGATACACTACAAGCCTCAGACTTTACTTCAATTCAAGAGCGGATTGTTGAGCTTAAAA CAACTAGTTATAAATCAACAATAACCCTCTCGGAGCGCTCAACTGAGGAGCCATTAAAATCCCTTGTCCAACTTGATGGT TCAAGCCACCTTGCCACTGAATCAGAGGCTCAATCAGGTATTCCGTTTCACTTCTCTGACTATCTGGAGCTTATCGACTG GACTGGCAGAGCAATCAGACCAGATAAAACAGGCTATATCGATTCAAGCCAGCCCAAATTGCTTAATGAACTTGGCATAT CCGCTGATGCATGGATAACGTCTTCCAAATCATTTAGGCGCCAATACAGTGGCGCTAGTGGTCGTTGGGAGGCTATGTGT GAGTTTAAAAAACAACATCAACATGGAAAATGGTGTAAAGGCAAATCCTATAGCGATGCATTGCACCCATCTCCCTAA
Upstream 100 bases:
>100_bases GCTTTCGTAAAAGATAGGACAGCCATATCTTTTTGCGATTTAGTCTATCCTATACTAGGCTTTTAATTACCTGATTCGAT AGTGTAATTAAGGGGGGATC
Downstream 100 bases:
>100_bases ATCACGTAGGCAAAACGATATCAATGATGTCGATTCCATTAGGGGGCTAAGTAAGCCAAAACGCTTCTTATAATCAACGC TACATGATTAGGACTCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTSARRTLIDAETTPFYHIINRCVRRAYLCGNDELTGKSFEHRRGWIVDKIKALSNIFCIDICAYAVMNNHYHLVLKIDI DKSKSLTNHDIITRWNQVTKGHEVATKYLNGDTLIEGERMLLDGLLTEWNERLSSISWFMRCLNEDIARRANREDECKGA FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADTLQASDFTSIQERIVELKTTSYKSTITLSERSTEEPLKSLVQLDG SSHLATESEAQSGIPFHFSDYLELIDWTGRAIRPDKTGYIDSSQPKLLNELGISADAWITSSKSFRRQYSGASGRWEAMC EFKKQHQHGKWCKGKSYSDALHPSP
Sequences:
>Translated_345_residues MTSARRTLIDAETTPFYHIINRCVRRAYLCGNDELTGKSFEHRRGWIVDKIKALSNIFCIDICAYAVMNNHYHLVLKIDI DKSKSLTNHDIITRWNQVTKGHEVATKYLNGDTLIEGERMLLDGLLTEWNERLSSISWFMRCLNEDIARRANREDECKGA FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADTLQASDFTSIQERIVELKTTSYKSTITLSERSTEEPLKSLVQLDG SSHLATESEAQSGIPFHFSDYLELIDWTGRAIRPDKTGYIDSSQPKLLNELGISADAWITSSKSFRRQYSGASGRWEAMC EFKKQHQHGKWCKGKSYSDALHPSP >Mature_344_residues TSARRTLIDAETTPFYHIINRCVRRAYLCGNDELTGKSFEHRRGWIVDKIKALSNIFCIDICAYAVMNNHYHLVLKIDID KSKSLTNHDIITRWNQVTKGHEVATKYLNGDTLIEGERMLLDGLLTEWNERLSSISWFMRCLNEDIARRANREDECKGAF WEGRFKSQALLDEQALLACMMYVDLNPIRAGIADTLQASDFTSIQERIVELKTTSYKSTITLSERSTEEPLKSLVQLDGS SHLATESEAQSGIPFHFSDYLELIDWTGRAIRPDKTGYIDSSQPKLLNELGISADAWITSSKSFRRQYSGASGRWEAMCE FKKQHQHGKWCKGKSYSDALHPSP
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39417; Mature: 39286
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSARRTLIDAETTPFYHIINRCVRRAYLCGNDELTGKSFEHRRGWIVDKIKALSNIFCI CCCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH DICAYAVMNNHYHLVLKIDIDKSKSLTNHDIITRWNQVTKGHEVATKYLNGDTLIEGERM HHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCEEECCHHH LLDGLLTEWNERLSSISWFMRCLNEDIARRANREDECKGAFWEGRFKSQALLDEQALLAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH MMYVDLNPIRAGIADTLQASDFTSIQERIVELKTTSYKSTITLSERSTEEPLKSLVQLDG HHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC SSHLATESEAQSGIPFHFSDYLELIDWTGRAIRPDKTGYIDSSQPKLLNELGISADAWIT CCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEC SSKSFRRQYSGASGRWEAMCEFKKQHQHGKWCKGKSYSDALHPSP CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSARRTLIDAETTPFYHIINRCVRRAYLCGNDELTGKSFEHRRGWIVDKIKALSNIFCI CCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH DICAYAVMNNHYHLVLKIDIDKSKSLTNHDIITRWNQVTKGHEVATKYLNGDTLIEGERM HHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCEEECCHHH LLDGLLTEWNERLSSISWFMRCLNEDIARRANREDECKGAFWEGRFKSQALLDEQALLAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH MMYVDLNPIRAGIADTLQASDFTSIQERIVELKTTSYKSTITLSERSTEEPLKSLVQLDG HHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC SSHLATESEAQSGIPFHFSDYLELIDWTGRAIRPDKTGYIDSSQPKLLNELGISADAWIT CCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEC SSKSFRRQYSGASGRWEAMCEFKKQHQHGKWCKGKSYSDALHPSP CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA