| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962745
Identifier: 157962745
GI number: 157962745
Start: 3581259
End: 3582476
Strand: Direct
Name: 157962745
Synonym: Spea_2927
Alternate gene names: NA
Gene position: 3581259-3582476 (Clockwise)
Preceding gene: 157962744
Following gene: 157962747
Centisome position: 69.21
GC content: 44.91
Gene sequence:
>1218_bases ATGTTTGCATTCATCGAAAAACTCTCCCATACGCAGCGTAAATATGCGCTTATTCTAGGATCTGTTAGCTTAATTTTAGC CGCAGTCTTGCTATGGAGTTTAAGCGATTCTCAGCAACCTAAGCTCGCAAATGGCGCCATTATCGTACTGCCTATCAAGC AACAAACCGATAGTTATAGCACTGATTGGCAAGCCTATGCCCACATGGAAAAAGTAATTAACCAACTCGGCACGTCGACG AATTACCCCGTTCTATTGGTTGAAGATGTGATTACTATGCTGTCTCAAGCATCGAGCTTTATTGATGATGGACAAGCTAT CGACCTTAACCGCTTATTTAATGTGTCAGGTGCTGCTTTAGTTGTTGAGTCATCTATCTCGACGAATTCAACTAACTCGA GTAACTCAACTAACTCAACTGCGCCTCAACTTCAGCTCAGCTATCGCTTACTCAACACTGAAAAAATTAAACAGGGAGTG ATTAAGGCCGACTCAGTTGACGCTTTGCTGTCGGCTCTTGTCGAGACCGTTAAGCAATTTATTGATGTTCCCTACACCCA AACAGCCAACCGAGACTGGTTTAGCGACCCGCTCCTTATTGAAGCGCTAAGGCAAATTCAATATCGTGACATAGAACAAG CTAAATCCAGTCTGCAGCAGCTATTAACTAATGACTCTACAAACCTGATAGCCACTAGATTATTAGCACAGCTGCATATC GATGCGCAGCAGTTGACTGCGGCAGAGCACCTCCTCAACAGTGCGGTTGAACAAGCTAAGTCCAATAACAATCGCCAACT TGCCAGACTCAAGCTCAGCCTAGCCCAAGTCAAACTTGGAAATGAACAACTCGAACTGGCGATTAGCGAGCTGTCTCAGG CAAGAAGCTTAGCCGCCAATACACAAGACTGGTTATATCTGGGTTATATCTCTAACTGGTCAGGACATATCTATCAGCGG CTCAATCGATACAGCAATGCTAGGGCGCAGTATCAATACGCCTTCGAATACCAGAACAAATCAGGCTACCCCGCAGGCCA AGTTACCGCCTTAAACAATCTCGCCCGCCTTGAAGTGTTAGAGCATAACTACAGTGCGGCGTACAAAGCGATCAAACAAT CGGTTGCGATTGTCAGCCAAAGACAGTTAACTCACCTTCATGAGGAAACCTTTACGCTGTTGTCCAAAATTGAAAATAAG CTGCAGCGTATACGTTAA
Upstream 100 bases:
>100_bases CCAAAATTAAAAATATGATAATTGTTTTCAATCAAACAATTAAGCACCACATCCTTAGATTAATTCGTTTATACTAAACT AAATAAACTTAAGGATAAGT
Downstream 100 bases:
>100_bases TTCATGTCCTCCCCTTTAGCCTCAAAGCAAGCTTTAAGCAAATAAGCTAAGACACAGATGAAGATTACATTTCTGCTTAT GGCTGATTGAATAAGTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MFAFIEKLSHTQRKYALILGSVSLILAAVLLWSLSDSQQPKLANGAIIVLPIKQQTDSYSTDWQAYAHMEKVINQLGTST NYPVLLVEDVITMLSQASSFIDDGQAIDLNRLFNVSGAALVVESSISTNSTNSSNSTNSTAPQLQLSYRLLNTEKIKQGV IKADSVDALLSALVETVKQFIDVPYTQTANRDWFSDPLLIEALRQIQYRDIEQAKSSLQQLLTNDSTNLIATRLLAQLHI DAQQLTAAEHLLNSAVEQAKSNNNRQLARLKLSLAQVKLGNEQLELAISELSQARSLAANTQDWLYLGYISNWSGHIYQR LNRYSNARAQYQYAFEYQNKSGYPAGQVTALNNLARLEVLEHNYSAAYKAIKQSVAIVSQRQLTHLHEETFTLLSKIENK LQRIR
Sequences:
>Translated_405_residues MFAFIEKLSHTQRKYALILGSVSLILAAVLLWSLSDSQQPKLANGAIIVLPIKQQTDSYSTDWQAYAHMEKVINQLGTST NYPVLLVEDVITMLSQASSFIDDGQAIDLNRLFNVSGAALVVESSISTNSTNSSNSTNSTAPQLQLSYRLLNTEKIKQGV IKADSVDALLSALVETVKQFIDVPYTQTANRDWFSDPLLIEALRQIQYRDIEQAKSSLQQLLTNDSTNLIATRLLAQLHI DAQQLTAAEHLLNSAVEQAKSNNNRQLARLKLSLAQVKLGNEQLELAISELSQARSLAANTQDWLYLGYISNWSGHIYQR LNRYSNARAQYQYAFEYQNKSGYPAGQVTALNNLARLEVLEHNYSAAYKAIKQSVAIVSQRQLTHLHEETFTLLSKIENK LQRIR >Mature_405_residues MFAFIEKLSHTQRKYALILGSVSLILAAVLLWSLSDSQQPKLANGAIIVLPIKQQTDSYSTDWQAYAHMEKVINQLGTST NYPVLLVEDVITMLSQASSFIDDGQAIDLNRLFNVSGAALVVESSISTNSTNSSNSTNSTAPQLQLSYRLLNTEKIKQGV IKADSVDALLSALVETVKQFIDVPYTQTANRDWFSDPLLIEALRQIQYRDIEQAKSSLQQLLTNDSTNLIATRLLAQLHI DAQQLTAAEHLLNSAVEQAKSNNNRQLARLKLSLAQVKLGNEQLELAISELSQARSLAANTQDWLYLGYISNWSGHIYQR LNRYSNARAQYQYAFEYQNKSGYPAGQVTALNNLARLEVLEHNYSAAYKAIKQSVAIVSQRQLTHLHEETFTLLSKIENK LQRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45333; Mature: 45333
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAFIEKLSHTQRKYALILGSVSLILAAVLLWSLSDSQQPKLANGAIIVLPIKQQTDSYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC TDWQAYAHMEKVINQLGTSTNYPVLLVEDVITMLSQASSFIDDGQAIDLNRLFNVSGAAL CHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCEE VVESSISTNSTNSSNSTNSTAPQLQLSYRLLNTEKIKQGVIKADSVDALLSALVETVKQF EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IDVPYTQTANRDWFSDPLLIEALRQIQYRDIEQAKSSLQQLLTNDSTNLIATRLLAQLHI HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC DAQQLTAAEHLLNSAVEQAKSNNNRQLARLKLSLAQVKLGNEQLELAISELSQARSLAAN CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC TQDWLYLGYISNWSGHIYQRLNRYSNARAQYQYAFEYQNKSGYPAGQVTALNNLARLEVL CCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH EHNYSAAYKAIKQSVAIVSQRQLTHLHEETFTLLSKIENKLQRIR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFAFIEKLSHTQRKYALILGSVSLILAAVLLWSLSDSQQPKLANGAIIVLPIKQQTDSYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC TDWQAYAHMEKVINQLGTSTNYPVLLVEDVITMLSQASSFIDDGQAIDLNRLFNVSGAAL CHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCEE VVESSISTNSTNSSNSTNSTAPQLQLSYRLLNTEKIKQGVIKADSVDALLSALVETVKQF EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IDVPYTQTANRDWFSDPLLIEALRQIQYRDIEQAKSSLQQLLTNDSTNLIATRLLAQLHI HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC DAQQLTAAEHLLNSAVEQAKSNNNRQLARLKLSLAQVKLGNEQLELAISELSQARSLAAN CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC TQDWLYLGYISNWSGHIYQRLNRYSNARAQYQYAFEYQNKSGYPAGQVTALNNLARLEVL CCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH EHNYSAAYKAIKQSVAIVSQRQLTHLHEETFTLLSKIENKLQRIR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA