| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is rhlE [H]
Identifier: 157962744
GI number: 157962744
Start: 3579604
End: 3581010
Strand: Direct
Name: rhlE [H]
Synonym: Spea_2926
Alternate gene names: 157962744
Gene position: 3579604-3581010 (Clockwise)
Preceding gene: 157962743
Following gene: 157962745
Centisome position: 69.18
GC content: 45.98
Gene sequence:
>1407_bases ATGCCGTTTTCTAAGCTTGGATTAAGCACACCTATCGTTAAAGCCGTTACCGAGCAAGGCTACACTAGCCCTACTCCTAT TCAAGCTAAGACCATTCCCGTTATATTAAGTCAACGCAACTTGATTGCCGCTGCGCAAACCGGTACGGGTAAAACCGCCA GTTTTGTACTACCAATTCTAGAGATGCTGAGTAAGAGCGAGACCCAGCGTAAGAAGCGCATTCGCGCCTTAATACTTACG CCAACTCGTGAGCTCGCGGTGCAGGTTGAAGACAACATCAGTCAATACGGCAAGCATTTAGATCTGACGTCAATGGCCAT GTATGGCGGCGTCGACTCTAAGCCTCAGCGTGAGCGCTTAATCCAAGGTGTCGACATCTTAGTCGCGACGCCGGGGCGTT TACTCGACATGTATACCCAGCGCGCAATTCATTTCGATGAGCTAGAATTTCTAGTACTCGATGAAGCCGATAGAATGCTG GATATGGGCTTTATTGAAGACATCAATAAGATCATCGAAAAGCTGCCAGTCGATAGACAGAGCCTGCTTTTCTCGGCGAC CTTATCACGCCAAGTAAAAGAGCTGGCAAGAGCGACCATCACTCGTCCAATCGAGATTTCGGTCACCCATAACACTGATA ACAAGCCTAAGATTGAGCAGTGGTTAGTTACCGTAGATAAAGACAAGAAGTCAGCCTTATTAAGCCACTTAATTCAAGAG AATAACTGGCAACAGGCGCTTATTTTTATTGAGACTAAGCAAGGCGCAGCCAAGCTGGTGAGCCAGCTTGAAAAACGTGG CATTACGGCTGAATGTATCCATGGAGGCCGTAGCCAAGAGATCCGTGAGCAAATTCTGGCAGACTTTAAGTCCGGTAAAA TTGGCTTATTGATTGCTACAGGTATTGCCGCCCGAGGTTTGGATATCGATGAGTTGCCTTTAGTGATTAACTACGACTTG CCATATCCTGCAGATGAATATATTCACCGTATCGGCCGTACTGGTCGTGCAGGTGCTAACGGTGAAGCGGTAGCGCTGGT ATCTAAAGATGACTTTAAAAACCTGTGTATGATTGAGACCCGTTTAGGCCATTTGATTGAACGCAGAGAAATTGAAGGCT TTGCGCCACGTAAAGAAGTGCCAATCTCAATTCTGAATTTTAAGCCAAAGAGCAAACAAATTACTGGCGCCGATAGCAAG CCAACAAGTGATAAAAAGCCTGCGAGAGACACTCGCCGCACATCAGCGCACGAGACTAAAGTTCATGGAGCTAAAGTTCA TGGAGCTAAGACTCACAAGGTGAAAGTTGATAGAGCTAATACTGATACAACTAAAGCAGGTAATGCTAGCAGTGATAGTT TACCGCAAGATCCTTGGGCATTTTCAAAGTCAAAGTTAACCAAATAG
Upstream 100 bases:
>100_bases ACATGCTGTTATAATGGCAAACAGCAACACAGTTATCAGCGCCAATCTGCGCAAAATCGATAGCTGCAATAGATAAATCA GACACATTATCGAGACTCGC
Downstream 100 bases:
>100_bases CCCAACATTAACTTTCACTTTCGACCTGACAGCATTTAACTAATTGCTATTAGCTAATGGCTCTTAACTAATAGCTAAGT GCTAAAAGCTTTGGCTGTCA
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPFSKLGLSTPIVKAVTEQGYTSPTPIQAKTIPVILSQRNLIAAAQTGTGKTASFVLPILEMLSKSETQRKKRIRALILT PTRELAVQVEDNISQYGKHLDLTSMAMYGGVDSKPQRERLIQGVDILVATPGRLLDMYTQRAIHFDELEFLVLDEADRML DMGFIEDINKIIEKLPVDRQSLLFSATLSRQVKELARATITRPIEISVTHNTDNKPKIEQWLVTVDKDKKSALLSHLIQE NNWQQALIFIETKQGAAKLVSQLEKRGITAECIHGGRSQEIREQILADFKSGKIGLLIATGIAARGLDIDELPLVINYDL PYPADEYIHRIGRTGRAGANGEAVALVSKDDFKNLCMIETRLGHLIERREIEGFAPRKEVPISILNFKPKSKQITGADSK PTSDKKPARDTRRTSAHETKVHGAKVHGAKTHKVKVDRANTDTTKAGNASSDSLPQDPWAFSKSKLTK
Sequences:
>Translated_468_residues MPFSKLGLSTPIVKAVTEQGYTSPTPIQAKTIPVILSQRNLIAAAQTGTGKTASFVLPILEMLSKSETQRKKRIRALILT PTRELAVQVEDNISQYGKHLDLTSMAMYGGVDSKPQRERLIQGVDILVATPGRLLDMYTQRAIHFDELEFLVLDEADRML DMGFIEDINKIIEKLPVDRQSLLFSATLSRQVKELARATITRPIEISVTHNTDNKPKIEQWLVTVDKDKKSALLSHLIQE NNWQQALIFIETKQGAAKLVSQLEKRGITAECIHGGRSQEIREQILADFKSGKIGLLIATGIAARGLDIDELPLVINYDL PYPADEYIHRIGRTGRAGANGEAVALVSKDDFKNLCMIETRLGHLIERREIEGFAPRKEVPISILNFKPKSKQITGADSK PTSDKKPARDTRRTSAHETKVHGAKVHGAKTHKVKVDRANTDTTKAGNASSDSLPQDPWAFSKSKLTK >Mature_467_residues PFSKLGLSTPIVKAVTEQGYTSPTPIQAKTIPVILSQRNLIAAAQTGTGKTASFVLPILEMLSKSETQRKKRIRALILTP TRELAVQVEDNISQYGKHLDLTSMAMYGGVDSKPQRERLIQGVDILVATPGRLLDMYTQRAIHFDELEFLVLDEADRMLD MGFIEDINKIIEKLPVDRQSLLFSATLSRQVKELARATITRPIEISVTHNTDNKPKIEQWLVTVDKDKKSALLSHLIQEN NWQQALIFIETKQGAAKLVSQLEKRGITAECIHGGRSQEIREQILADFKSGKIGLLIATGIAARGLDIDELPLVINYDLP YPADEYIHRIGRTGRAGANGEAVALVSKDDFKNLCMIETRLGHLIERREIEGFAPRKEVPISILNFKPKSKQITGADSKP TSDKKPARDTRRTSAHETKVHGAKVHGAKTHKVKVDRANTDTTKAGNASSDSLPQDPWAFSKSKLTK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=39.8328690807799, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI169881239, Length=434, Percent_Identity=38.0184331797235, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI13514809, Length=434, Percent_Identity=38.0184331797235, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI301171475, Length=403, Percent_Identity=38.9578163771712, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI301171467, Length=403, Percent_Identity=38.9578163771712, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI87196351, Length=403, Percent_Identity=38.9578163771712, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=39.2857142857143, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=39.2857142857143, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=36.1930294906166, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI41327771, Length=373, Percent_Identity=36.4611260053619, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI148613856, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI38201710, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=36.9014084507042, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=37.7410468319559, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI222352149, Length=361, Percent_Identity=38.2271468144044, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=37.0786516853933, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.9747899159664, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.9747899159664, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.9747899159664, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=36.9318181818182, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=36.9318181818182, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI164664518, Length=406, Percent_Identity=33.9901477832512, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=37.8612716763006, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=37.1508379888268, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=37.2222222222222, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=35.8543417366947, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=37.2031662269129, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=35.9773371104816, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI38327634, Length=339, Percent_Identity=37.4631268436578, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI41327776, Length=373, Percent_Identity=34.0482573726542, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI13514831, Length=351, Percent_Identity=36.1823361823362, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=37.9947229551451, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI13129006, Length=378, Percent_Identity=34.9206349206349, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI4503529, Length=367, Percent_Identity=35.149863760218, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI38569505, Length=352, Percent_Identity=33.5227272727273, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38569503, Length=352, Percent_Identity=33.5227272727273, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=35.149863760218, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=31.1111111111111, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=29.7450424929178, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=30.028328611898, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=30.028328611898, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI8922886, Length=378, Percent_Identity=34.1269841269841, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI6005743, Length=378, Percent_Identity=34.9206349206349, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=35.4570637119114, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI164419732, Length=375, Percent_Identity=33.0666666666667, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI9506931, Length=421, Percent_Identity=29.6912114014252, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=30.7901907356948, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=35.8823529411765, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=32.9341317365269, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=32.1052631578947, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI154759257, Length=450, Percent_Identity=28.2222222222222, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI20336298, Length=354, Percent_Identity=29.9435028248588, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=316, Percent_Identity=28.7974683544304, Blast_Score=130, Evalue=2e-30, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=53.7037037037037, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI87082221, Length=387, Percent_Identity=38.7596899224806, Blast_Score=280, Evalue=1e-76, Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=38.7533875338753, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI1788930, Length=380, Percent_Identity=37.3684210526316, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI1787605, Length=362, Percent_Identity=37.0165745856354, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI48994977, Length=396, Percent_Identity=21.4646464646465, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=36.1477572559367, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=39.0957446808511, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=39.0957446808511, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=39.0957446808511, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=36.1878453038674, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI115533224, Length=340, Percent_Identity=40, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=35.4166666666667, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI71995724, Length=358, Percent_Identity=37.4301675977654, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI86570094, Length=422, Percent_Identity=34.1232227488152, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17507121, Length=358, Percent_Identity=37.1508379888268, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=38.3561643835616, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=38.3098591549296, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=34.6994535519126, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI71999646, Length=395, Percent_Identity=32.6582278481013, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71999644, Length=395, Percent_Identity=32.6582278481013, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17552642, Length=398, Percent_Identity=34.4221105527638, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17537549, Length=364, Percent_Identity=34.8901098901099, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=36.5497076023392, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=32.0547945205479, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=36.3881401617251, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.5795148247978, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.6774193548387, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17505370, Length=342, Percent_Identity=35.9649122807018, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI115532546, Length=388, Percent_Identity=32.9896907216495, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=33.9622641509434, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=31.331592689295, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17508543, Length=376, Percent_Identity=31.1170212765957, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI71982858, Length=369, Percent_Identity=29.2682926829268, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI193206561, Length=383, Percent_Identity=30.2872062663185, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=33.6182336182336, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=32.2834645669291, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=32.2834645669291, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=32.2834645669291, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17556951, Length=361, Percent_Identity=30.7479224376731, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=26.7217630853994, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17507641, Length=410, Percent_Identity=29.2682926829268, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI32564046, Length=388, Percent_Identity=29.639175257732, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=24.1050119331742, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71997889, Length=402, Percent_Identity=26.6169154228856, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25148291, Length=419, Percent_Identity=27.2076372315036, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71982862, Length=230, Percent_Identity=27.8260869565217, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI25148205, Length=344, Percent_Identity=23.546511627907, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=45.4545454545455, Blast_Score=90, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324778, Length=347, Percent_Identity=42.6512968299712, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321856, Length=372, Percent_Identity=36.8279569892473, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=39.5095367847411, Blast_Score=247, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=360, Percent_Identity=37.5, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=39.1666666666667, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=37.7840909090909, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=35.4570637119114, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=384, Percent_Identity=34.375, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323947, Length=350, Percent_Identity=36.2857142857143, Blast_Score=229, Evalue=9e-61, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=30.7875894988067, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=355, Percent_Identity=36.9014084507042, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=33.6134453781513, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=32.0855614973262, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=32.4607329842932, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=386, Percent_Identity=30.3108808290155, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=350, Percent_Identity=34.8571428571429, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=350, Percent_Identity=34.8571428571429, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=33.6870026525199, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=376, Percent_Identity=30.5851063829787, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=409, Percent_Identity=31.2958435207824, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=362, Percent_Identity=31.767955801105, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=30.8433734939759, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.433734939759, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=26.8065268065268, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=413, Percent_Identity=25.4237288135593, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321374, Length=405, Percent_Identity=27.6543209876543, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=40.5172413793103, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=38.8101983002833, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=36.4116094986807, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI17985987, Length=387, Percent_Identity=38.7596899224806, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI21356161, Length=355, Percent_Identity=40.5633802816901, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21355075, Length=350, Percent_Identity=38.5714285714286, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=37.6373626373626, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=37.6373626373626, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=37.6373626373626, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=37.6373626373626, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=37.6373626373626, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=37.6373626373626, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=37.6373626373626, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI28574962, Length=360, Percent_Identity=36.6666666666667, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=37.9120879120879, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=35.989010989011, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24662330, Length=408, Percent_Identity=35.5392156862745, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI17977678, Length=401, Percent_Identity=34.9127182044888, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=36.8421052631579, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=34.3490304709141, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=34.3490304709141, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI17136814, Length=383, Percent_Identity=38.9033942558747, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=36.6666666666667, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=32.5779036827195, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=32.5779036827195, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24582080, Length=358, Percent_Identity=35.195530726257, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582078, Length=358, Percent_Identity=35.195530726257, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17136248, Length=358, Percent_Identity=35.195530726257, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582075, Length=358, Percent_Identity=35.195530726257, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=35.1612903225806, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24642822, Length=367, Percent_Identity=32.6975476839237, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=33.0687830687831, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24666101, Length=345, Percent_Identity=33.6231884057971, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581954, Length=369, Percent_Identity=30.6233062330623, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581952, Length=369, Percent_Identity=30.6233062330623, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581956, Length=369, Percent_Identity=30.6233062330623, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=30.3370786516854, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI20130173, Length=457, Percent_Identity=28.8840262582057, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24643725, Length=472, Percent_Identity=26.6949152542373, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24640164, Length=369, Percent_Identity=28.7262872628726, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=32.2085889570552, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI17136666, Length=400, Percent_Identity=27.75, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI19920478, Length=343, Percent_Identity=29.4460641399417, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=37.0558375634518, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=37.0558375634518, Blast_Score=131, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51944; Mature: 51812
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSKLGLSTPIVKAVTEQGYTSPTPIQAKTIPVILSQRNLIAAAQTGTGKTASFVLPIL CCCHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHH EMLSKSETQRKKRIRALILTPTRELAVQVEDNISQYGKHLDLTSMAMYGGVDSKPQRERL HHHHCHHHHHHHHEEEEEECCCHHHEEEEHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHH IQGVDILVATPGRLLDMYTQRAIHFDELEFLVLDEADRMLDMGFIEDINKIIEKLPVDRQ HCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH SLLFSATLSRQVKELARATITRPIEISVTHNTDNKPKIEQWLVTVDKDKKSALLSHLIQE HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHHC NNWQQALIFIETKQGAAKLVSQLEKRGITAECIHGGRSQEIREQILADFKSGKIGLLIAT CCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEE GIAARGLDIDELPLVINYDLPYPADEYIHRIGRTGRAGANGEAVALVSKDDFKNLCMIET CHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHH RLGHLIERREIEGFAPRKEVPISILNFKPKSKQITGADSKPTSDKKPARDTRRTSAHETK HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHCCCHHHH VHGAKVHGAKTHKVKVDRANTDTTKAGNASSDSLPQDPWAFSKSKLTK CCCEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure PFSKLGLSTPIVKAVTEQGYTSPTPIQAKTIPVILSQRNLIAAAQTGTGKTASFVLPIL CCHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHH EMLSKSETQRKKRIRALILTPTRELAVQVEDNISQYGKHLDLTSMAMYGGVDSKPQRERL HHHHCHHHHHHHHEEEEEECCCHHHEEEEHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHH IQGVDILVATPGRLLDMYTQRAIHFDELEFLVLDEADRMLDMGFIEDINKIIEKLPVDRQ HCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH SLLFSATLSRQVKELARATITRPIEISVTHNTDNKPKIEQWLVTVDKDKKSALLSHLIQE HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHHC NNWQQALIFIETKQGAAKLVSQLEKRGITAECIHGGRSQEIREQILADFKSGKIGLLIAT CCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEE GIAARGLDIDELPLVINYDLPYPADEYIHRIGRTGRAGANGEAVALVSKDDFKNLCMIET CHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHH RLGHLIERREIEGFAPRKEVPISILNFKPKSKQITGADSKPTSDKKPARDTRRTSAHETK HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHCCCHHHH VHGAKVHGAKTHKVKVDRANTDTTKAGNASSDSLPQDPWAFSKSKLTK CCCEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]