| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962739
Identifier: 157962739
GI number: 157962739
Start: 3573607
End: 3574956
Strand: Direct
Name: 157962739
Synonym: Spea_2921
Alternate gene names: NA
Gene position: 3573607-3574956 (Clockwise)
Preceding gene: 157962738
Following gene: 157962741
Centisome position: 69.06
GC content: 34.3
Gene sequence:
>1350_bases ATGTATGAAGTTTATTGCATCAGTGCTGGGCAGTTGGATGTTAAGAAAGATGCAAATGTTATAAATAAAAAGAATAATTA CTTGAACTATGGCTTACTGTCTTTGACATCAATTATTAATGAGTTTGGTCTAACTCCAATTCAGTTACATGGGCATTTTT CTGCGCCAAGGGCTTTTGCTGAATATTGTGTGCAGTTAGGTATTACTAAGACGAAGTTTCCTGTATTTATTTCTATACCT AGCTTTTATGCAATAAGTTGGGTTAACGATTTTACTAAGATACTTAAATATGAATTAAAAATAAAAGAAATTATAATTGG TGGACGCTGGGTAATAGATGGCGAAATTGCACAGTTAACTCAGTTATTGCCATATGCAGACAAAATAGTCGATGGCTTAG GTGAAAATCAGATAGCCACACTTCTCAACATAAAAGCAGATAGAGTTTCGGGTTATGTACCTTTAAATTACAACCTGGTT GATAAAAGAGAATTTTATCAACCAGGTATAGAAGTTTCTCGTGGATGTGGAATGAAATGTGATTTTTGTCAAGAACGTGA TGAGAAGCTACAACCATTAAAATCTGCATTAGCTCTTACATCTGAAGCAAGCCATATTTTATTGGAAGATGACTTAAACC CTATGTCGCCGTACTTTGAGGCATCAATATTTAAACCTTCATCACAGTGGCTAGAAGAGTTAACTGAGCAGAGAGAGTTA CATTCACAAACCTATTCTTGGCGAGCAGAGTCGAGAGCTGATAATTTCACATCTAAGGATATCTCAGCACTAGCTAAGGC TGGTATGAAAGTTTTAGATCTTGGTTTGGAAAGCGCGAGCCCGAAACAAATAAAAAATATGGGCAAAGCTAAAGATCCTG AAAAGTATCTAACGCGAGCTTCAAGGCTTCTAGAGGACGCTCATGAAGTAGGAATTGATGTTAAAGTTAATGTCTTACTT TATGCAGGTGAAACTAGTAAGACAATAGATGAAACATATAAATGGTTAGACCAACATAGAGATTACATTAAAGGTGTTTC TGTAGGCCCTGTATTAGCTTTTGGTTGGGATAATAGAAAATCAAACTTTATTAAAACCTTAGAATCGTGTGGGGCTAGTG TATGTCAAGATAGTTCGTTTACTGGAGTAACTGGTTTTAATTTAAGTGATGCAATTAATTATGAAAATTCATTACAAATT TCAAAGGAACTATCTAGAGATTTTATGACTGCAAATGATTATTTCTATCTGAAATCATTCTCATATTACTCTCGTGACTA TAAATATCAGGATTTTTTAGATGATATTCAAAGGGAAAAAGGTAGTTATTCATTTGATGTGAAGTACTGA
Upstream 100 bases:
>100_bases AAAAAACGTTCAACCAAATAGGGTTGTTAATTAATTTTACAATGCATAATCCGGCCACTGCGTTAAGTGGGGATAATAAT TAGAATAGGAATTTATACTA
Downstream 100 bases:
>100_bases GGGGATCCCTCTGTACTTAGTGTTTGCTGTATTCCAGGCGTTTTCGAACTGCGCCATGGGTCTTTGCTTGTGATGTAGCG TTAGGGTAACTTTATCTGAA
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Cobalamin
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MYEVYCISAGQLDVKKDANVINKKNNYLNYGLLSLTSIINEFGLTPIQLHGHFSAPRAFAEYCVQLGITKTKFPVFISIP SFYAISWVNDFTKILKYELKIKEIIIGGRWVIDGEIAQLTQLLPYADKIVDGLGENQIATLLNIKADRVSGYVPLNYNLV DKREFYQPGIEVSRGCGMKCDFCQERDEKLQPLKSALALTSEASHILLEDDLNPMSPYFEASIFKPSSQWLEELTEQREL HSQTYSWRAESRADNFTSKDISALAKAGMKVLDLGLESASPKQIKNMGKAKDPEKYLTRASRLLEDAHEVGIDVKVNVLL YAGETSKTIDETYKWLDQHRDYIKGVSVGPVLAFGWDNRKSNFIKTLESCGASVCQDSSFTGVTGFNLSDAINYENSLQI SKELSRDFMTANDYFYLKSFSYYSRDYKYQDFLDDIQREKGSYSFDVKY
Sequences:
>Translated_449_residues MYEVYCISAGQLDVKKDANVINKKNNYLNYGLLSLTSIINEFGLTPIQLHGHFSAPRAFAEYCVQLGITKTKFPVFISIP SFYAISWVNDFTKILKYELKIKEIIIGGRWVIDGEIAQLTQLLPYADKIVDGLGENQIATLLNIKADRVSGYVPLNYNLV DKREFYQPGIEVSRGCGMKCDFCQERDEKLQPLKSALALTSEASHILLEDDLNPMSPYFEASIFKPSSQWLEELTEQREL HSQTYSWRAESRADNFTSKDISALAKAGMKVLDLGLESASPKQIKNMGKAKDPEKYLTRASRLLEDAHEVGIDVKVNVLL YAGETSKTIDETYKWLDQHRDYIKGVSVGPVLAFGWDNRKSNFIKTLESCGASVCQDSSFTGVTGFNLSDAINYENSLQI SKELSRDFMTANDYFYLKSFSYYSRDYKYQDFLDDIQREKGSYSFDVKY >Mature_449_residues MYEVYCISAGQLDVKKDANVINKKNNYLNYGLLSLTSIINEFGLTPIQLHGHFSAPRAFAEYCVQLGITKTKFPVFISIP SFYAISWVNDFTKILKYELKIKEIIIGGRWVIDGEIAQLTQLLPYADKIVDGLGENQIATLLNIKADRVSGYVPLNYNLV DKREFYQPGIEVSRGCGMKCDFCQERDEKLQPLKSALALTSEASHILLEDDLNPMSPYFEASIFKPSSQWLEELTEQREL HSQTYSWRAESRADNFTSKDISALAKAGMKVLDLGLESASPKQIKNMGKAKDPEKYLTRASRLLEDAHEVGIDVKVNVLL YAGETSKTIDETYKWLDQHRDYIKGVSVGPVLAFGWDNRKSNFIKTLESCGASVCQDSSFTGVTGFNLSDAINYENSLQI SKELSRDFMTANDYFYLKSFSYYSRDYKYQDFLDDIQREKGSYSFDVKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51046; Mature: 51046
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEVYCISAGQLDVKKDANVINKKNNYLNYGLLSLTSIINEFGLTPIQLHGHFSAPRAFA CEEEEEECCCCEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH EYCVQLGITKTKFPVFISIPSFYAISWVNDFTKILKYELKIKEIIIGGRWVIDGEIAQLT HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCHHHHHH QLLPYADKIVDGLGENQIATLLNIKADRVSGYVPLNYNLVDKREFYQPGIEVSRGCGMKC HHHHHHHHHHHCCCCCHHHHHHEEEHHHHCCEEEECCCEECCHHHHCCCCCCCCCCCCCC DFCQERDEKLQPLKSALALTSEASHILLEDDLNPMSPYFEASIFKPSSQWLEELTEQREL HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEEECCHHHHHHHHHHHHHH HSQTYSWRAESRADNFTSKDISALAKAGMKVLDLGLESASPKQIKNMGKAKDPEKYLTRA HHHHHCCCCHHCCCCCCHHHHHHHHHCCHHEEECCCCCCCHHHHHHCCCCCCHHHHHHHH SRLLEDAHEVGIDVKVNVLLYAGETSKTIDETYKWLDQHRDYIKGVSVGPVLAFGWDNRK HHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH SNFIKTLESCGASVCQDSSFTGVTGFNLSDAINYENSLQISKELSRDFMTANDYFYLKSF HHHHHHHHHHCHHHHCCCCCCCEECCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECH SYYSRDYKYQDFLDDIQREKGSYSFDVKY HHHHCCCCHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MYEVYCISAGQLDVKKDANVINKKNNYLNYGLLSLTSIINEFGLTPIQLHGHFSAPRAFA CEEEEEECCCCEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH EYCVQLGITKTKFPVFISIPSFYAISWVNDFTKILKYELKIKEIIIGGRWVIDGEIAQLT HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCHHHHHH QLLPYADKIVDGLGENQIATLLNIKADRVSGYVPLNYNLVDKREFYQPGIEVSRGCGMKC HHHHHHHHHHHCCCCCHHHHHHEEEHHHHCCEEEECCCEECCHHHHCCCCCCCCCCCCCC DFCQERDEKLQPLKSALALTSEASHILLEDDLNPMSPYFEASIFKPSSQWLEELTEQREL HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEEECCHHHHHHHHHHHHHH HSQTYSWRAESRADNFTSKDISALAKAGMKVLDLGLESASPKQIKNMGKAKDPEKYLTRA HHHHHCCCCHHCCCCCCHHHHHHHHHCCHHEEECCCCCCCHHHHHHCCCCCCHHHHHHHH SRLLEDAHEVGIDVKVNVLLYAGETSKTIDETYKWLDQHRDYIKGVSVGPVLAFGWDNRK HHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH SNFIKTLESCGASVCQDSSFTGVTGFNLSDAINYENSLQISKELSRDFMTANDYFYLKSF HHHHHHHHHHCHHHHCCCCCCCEECCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECH SYYSRDYKYQDFLDDIQREKGSYSFDVKY HHHHCCCCHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA