| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962713
Identifier: 157962713
GI number: 157962713
Start: 3532660
End: 3533055
Strand: Direct
Name: 157962713
Synonym: Spea_2894
Alternate gene names: NA
Gene position: 3532660-3533055 (Clockwise)
Preceding gene: 157962712
Following gene: 157962716
Centisome position: 68.27
GC content: 43.69
Gene sequence:
>396_bases ATGATGACAGATTTTTTGATTATTGCCGCAGTGATCATGGTTGCTGCATTTTTTTGGCAATTGAGGCAAATGGCTGAAAT AAGCCGTGTTTTTACTAATAAAGAGTGCCAAAAACAAAAAGTTCAGCTGCTCGCGATTGCACAAGAATCCGCAAAACCTA GCCTTGGCGGCAGCAGTGGATTGACCTGGAAAGTTAAATATCTATTTGAATTTAGCACCGATGGTATCAATCAGTATCGT GGTAACTTATGGATGCACGGTAAAAAGATACAAAAAATACAGTGGCCAATATTCCCTGAGCCAGAGTGGAGTGAAGCGCC AGAGGCGAAGGGGTCGTTAGGTGGTGGATGTGGCGGACGCTCTCGAGGTGGTTGTAATTCAGGCCGTTGTAAATAA
Upstream 100 bases:
>100_bases TTCCATTAATTCGCACTCAGCTACTCGCTCAACTACGTAATCCAAATCGTAGCACAGAGCTTGCAACTGCAATCGGCGGT TTGTTCAAGGTAACGAAAGG
Downstream 100 bases:
>100_bases ATATCCGCAACACCAGCCCTGAATGAAGTAAAGGCACGGCCCCAGAGGAGACGTGCCTTTTCTATTTTTGTGTAAGCTCA TCCAGCTATATGAGTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMTDFLIIAAVIMVAAFFWQLRQMAEISRVFTNKECQKQKVQLLAIAQESAKPSLGGSSGLTWKVKYLFEFSTDGINQYR GNLWMHGKKIQKIQWPIFPEPEWSEAPEAKGSLGGGCGGRSRGGCNSGRCK
Sequences:
>Translated_131_residues MMTDFLIIAAVIMVAAFFWQLRQMAEISRVFTNKECQKQKVQLLAIAQESAKPSLGGSSGLTWKVKYLFEFSTDGINQYR GNLWMHGKKIQKIQWPIFPEPEWSEAPEAKGSLGGGCGGRSRGGCNSGRCK >Mature_131_residues MMTDFLIIAAVIMVAAFFWQLRQMAEISRVFTNKECQKQKVQLLAIAQESAKPSLGGSSGLTWKVKYLFEFSTDGINQYR GNLWMHGKKIQKIQWPIFPEPEWSEAPEAKGSLGGGCGGRSRGGCNSGRCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14591; Mature: 14591
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTDFLIIAAVIMVAAFFWQLRQMAEISRVFTNKECQKQKVQLLAIAQESAKPSLGGSSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC LTWKVKYLFEFSTDGINQYRGNLWMHGKKIQKIQWPIFPEPEWSEAPEAKGSLGGGCGGR CEEEEEEEEEECCCCHHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC SRGGCNSGRCK CCCCCCCCCCC >Mature Secondary Structure MMTDFLIIAAVIMVAAFFWQLRQMAEISRVFTNKECQKQKVQLLAIAQESAKPSLGGSSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC LTWKVKYLFEFSTDGINQYRGNLWMHGKKIQKIQWPIFPEPEWSEAPEAKGSLGGGCGGR CEEEEEEEEEECCCCHHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC SRGGCNSGRCK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA