| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962644
Identifier: 157962644
GI number: 157962644
Start: 3447229
End: 3447912
Strand: Direct
Name: 157962644
Synonym: Spea_2824
Alternate gene names: NA
Gene position: 3447229-3447912 (Clockwise)
Preceding gene: 157962643
Following gene: 157962647
Centisome position: 66.62
GC content: 42.84
Gene sequence:
>684_bases ATGACTAATATCTTCGCGCCAAAAACCACCAGAACGCAAAAAGTGCTGGGGTATTTTTTTATGTTGCTACTGGCGCTCAT GATGATTGCCGTATTTAGCAACACTTTGGTTAACGACGAGATTTATGAACCACTCAGTCTATTTGCCGCAGTGCTGTCTG TAGTTTTGCTTGTTGCTATGTTTTGGGGGTTAAAGCAGAAGAATTCATGGCTGAGAGTCAATCTTGATAATCAGCCTCGT AGCCCTGTAAAGGTGATCTTATCTGTCACTATCGGCATTCCCATTCTATTGCACTTTTCATTAGCTAAAGGGTTACCTGT ACTACTGCATATCCTGCTCGCCGATAAAGCCATCATGATTGCCACCATAGACGATAAACGCTTTGGCTATTACAGCCGCA CCTGCGATGGTGGTCTATACCTTGGAGGTTATAGTTTCTGGGGCAACGACTACATCTGCGGCATTAAAAAAGAGGATTGG GATAGTTATCAATCGGGAGACAAACTCGCGCTATATGGTGATAAATCAATACTGGGGTTCACCTACCAAAAATACACCCT GCTCACCGATGAATTATTGCAACAGATGATTGCACAATCAGCCGCCTTAAAAGCAGAAGCTATCACAGGCAAAAAACCTA TGAGCCTTGAACAGGCACGAAAATTTATTTCTCAAGGTCAATAA
Upstream 100 bases:
>100_bases GCTATTTGGATCCTTTACCTGTTATCACAAAACCTACCCTACATATTATCTTAAATCATAAAGTTAACGTTTATCGTCAC CGAAAACGCTAAGGAACGGC
Downstream 100 bases:
>100_bases AAACAATCAACCCAACATGAGTGGTTGGGCTGACTCTAAACACACTTAGAAGCAGCCTTAAAGCTCCTTTTATAAAGTCT AATAGCTCTTAAGATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTNIFAPKTTRTQKVLGYFFMLLLALMMIAVFSNTLVNDEIYEPLSLFAAVLSVVLLVAMFWGLKQKNSWLRVNLDNQPR SPVKVILSVTIGIPILLHFSLAKGLPVLLHILLADKAIMIATIDDKRFGYYSRTCDGGLYLGGYSFWGNDYICGIKKEDW DSYQSGDKLALYGDKSILGFTYQKYTLLTDELLQQMIAQSAALKAEAITGKKPMSLEQARKFISQGQ
Sequences:
>Translated_227_residues MTNIFAPKTTRTQKVLGYFFMLLLALMMIAVFSNTLVNDEIYEPLSLFAAVLSVVLLVAMFWGLKQKNSWLRVNLDNQPR SPVKVILSVTIGIPILLHFSLAKGLPVLLHILLADKAIMIATIDDKRFGYYSRTCDGGLYLGGYSFWGNDYICGIKKEDW DSYQSGDKLALYGDKSILGFTYQKYTLLTDELLQQMIAQSAALKAEAITGKKPMSLEQARKFISQGQ >Mature_226_residues TNIFAPKTTRTQKVLGYFFMLLLALMMIAVFSNTLVNDEIYEPLSLFAAVLSVVLLVAMFWGLKQKNSWLRVNLDNQPRS PVKVILSVTIGIPILLHFSLAKGLPVLLHILLADKAIMIATIDDKRFGYYSRTCDGGLYLGGYSFWGNDYICGIKKEDWD SYQSGDKLALYGDKSILGFTYQKYTLLTDELLQQMIAQSAALKAEAITGKKPMSLEQARKFISQGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25468; Mature: 25337
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIFAPKTTRTQKVLGYFFMLLLALMMIAVFSNTLVNDEIYEPLSLFAAVLSVVLLVAM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FWGLKQKNSWLRVNLDNQPRSPVKVILSVTIGIPILLHFSLAKGLPVLLHILLADKAIMI HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEE ATIDDKRFGYYSRTCDGGLYLGGYSFWGNDYICGIKKEDWDSYQSGDKLALYGDKSILGF EEECCCCCCCCCCCCCCCEEECCEEECCCCEEECCCCCCCCHHCCCCEEEEEECCCEEEE TYQKYTLLTDELLQQMIAQSAALKAEAITGKKPMSLEQARKFISQGQ EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TNIFAPKTTRTQKVLGYFFMLLLALMMIAVFSNTLVNDEIYEPLSLFAAVLSVVLLVAM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FWGLKQKNSWLRVNLDNQPRSPVKVILSVTIGIPILLHFSLAKGLPVLLHILLADKAIMI HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEE ATIDDKRFGYYSRTCDGGLYLGGYSFWGNDYICGIKKEDWDSYQSGDKLALYGDKSILGF EEECCCCCCCCCCCCCCCEEECCEEECCCCEEECCCCCCCCHHCCCCEEEEEECCCEEEE TYQKYTLLTDELLQQMIAQSAALKAEAITGKKPMSLEQARKFISQGQ EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA