| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962635
Identifier: 157962635
GI number: 157962635
Start: 3436164
End: 3436676
Strand: Direct
Name: 157962635
Synonym: Spea_2815
Alternate gene names: NA
Gene position: 3436164-3436676 (Clockwise)
Preceding gene: 157962633
Following gene: 157962641
Centisome position: 66.4
GC content: 49.9
Gene sequence:
>513_bases ATGACTCTTAGACGCTCATTAGGCCAACAGTGGAGTAAGTCGATTCTTGCTCACAGACTAGCTTTAACCCTACACAGTAG TGACAAGGTACAGCAGCTATTTGGCGGTGCTACCTCTCTTACCACTGTGACCAACACAATTTCTGCATTGGTATTTGCTG AGGGCGACCCAGTTTGGCTTCCACCTATGGACAGCAGTGAGCAGACGCCACTCGGGCAAGAGTTTGCCCTGCACTGTTTA TTTGCCGCCAGTCGTTTACTGTTTGTCAAAGAGATTGAGCAAGGCGAACTCAATCAAGCGGAGCATCTGGTGCTAACGAT TGGTTACCAGTGGAGTCAGTCGCTTATTAAGTCCGAAGATGAGCATCCGCTCGCCAACAGTGAATCAACAAGCAGCGAAC TCGGCGCCGATGCGTTGCAACTGTGTCTACTGCTGCAAACCATCAATACTCAGCTCGAAAAAGTGCGCAGTGACAAGCGC CAATCGAGCCGCAATATGGGTAGTCATGGTTAG
Upstream 100 bases:
>100_bases CTAGACCACACCAATATGCAATGCCGCGCACATAGCGCGATAGGCTTTGATGCTAAAATCACTGATTAGTGACTTTCATC CCTAGATTTAAGTAAACAAC
Downstream 100 bases:
>100_bases CTTTTACTAGATTTTATAAATAAAAAGCCCGCAAACTTTCATTTGCGGGCTTTTTGTCGTGCTTTATTTGGCGCAATTAG CGAAACAGTCGCTTATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTLRRSLGQQWSKSILAHRLALTLHSSDKVQQLFGGATSLTTVTNTISALVFAEGDPVWLPPMDSSEQTPLGQEFALHCL FAASRLLFVKEIEQGELNQAEHLVLTIGYQWSQSLIKSEDEHPLANSESTSSELGADALQLCLLLQTINTQLEKVRSDKR QSSRNMGSHG
Sequences:
>Translated_170_residues MTLRRSLGQQWSKSILAHRLALTLHSSDKVQQLFGGATSLTTVTNTISALVFAEGDPVWLPPMDSSEQTPLGQEFALHCL FAASRLLFVKEIEQGELNQAEHLVLTIGYQWSQSLIKSEDEHPLANSESTSSELGADALQLCLLLQTINTQLEKVRSDKR QSSRNMGSHG >Mature_169_residues TLRRSLGQQWSKSILAHRLALTLHSSDKVQQLFGGATSLTTVTNTISALVFAEGDPVWLPPMDSSEQTPLGQEFALHCLF AASRLLFVKEIEQGELNQAEHLVLTIGYQWSQSLIKSEDEHPLANSESTSSELGADALQLCLLLQTINTQLEKVRSDKRQ SSRNMGSHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18744; Mature: 18613
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRRSLGQQWSKSILAHRLALTLHSSDKVQQLFGGATSLTTVTNTISALVFAEGDPVWL CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEC PPMDSSEQTPLGQEFALHCLFAASRLLFVKEIEQGELNQAEHLVLTIGYQWSQSLIKSED CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCC EHPLANSESTSSELGADALQLCLLLQTINTQLEKVRSDKRQSSRNMGSHG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLRRSLGQQWSKSILAHRLALTLHSSDKVQQLFGGATSLTTVTNTISALVFAEGDPVWL CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEC PPMDSSEQTPLGQEFALHCLFAASRLLFVKEIEQGELNQAEHLVLTIGYQWSQSLIKSED CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCC EHPLANSESTSSELGADALQLCLLLQTINTQLEKVRSDKRQSSRNMGSHG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA