| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mdtL [H]
Identifier: 157962589
GI number: 157962589
Start: 3381662
End: 3382861
Strand: Direct
Name: mdtL [H]
Synonym: Spea_2768
Alternate gene names: 157962589
Gene position: 3381662-3382861 (Clockwise)
Preceding gene: 157962588
Following gene: 157962594
Centisome position: 65.35
GC content: 45.58
Gene sequence:
>1200_bases GTGAGCAGAGTGATGAATTTTAAAGCCATCTTACTGGCCTGTTTAATTATCAGTGTCGGGCAATTGAGTATGGGATTAGT ATTCCCATCACTGCCTTGGATAGCCAAAGATTTTTCGGTTTCCCATGAACAGGTTCAGATATTGGTCAGTATTTATTTAC TAGGATTTGGTCCTTCACAGTTTTTCTACGGCCCTATTTCTGATGCGCTTGGACGCAAAAAAGTGTTGTTAATTGGCCTG ATGATCGCCATGCTAGGTCTACTTATGATCATTTTTCTCAGCCATTCATTTACCGGTATGGTGCTAGGGCGCTTCCTTCA AGGATTAGGTACCGGATGTTGTGCTGTACTGGCTCGAGCCTCCACACGAGATAACTTCAGTGGTGCAGAACTGCCAGTTG CAATGTCCTACATAGCAATGGTCGCCTCGATAACACCTCTGTTCGCTCCAGTGCTTGGTGGCTTCATCAACTTCCACTTT GGTTGGACTATGGTGTTCATCTCTTTACTGGGTTACCTCACTCTCGTTTGGGCTGTTGCGGCATTACGATTCCAGGAAAC TATCGACCATCCCTCTCCCCTTCCGTCTCCGAAGAAGGTGTTACTTCAGTATCGTGAGCTACTGAGTTCTCGTTACTTCA TGAGCTTTGCCAGCATAGGTTGGCTAAATTTCAGTTTGATGATCACTACGATTTCGGTGATGCCATTTATCATGCAAAAC CAAATTGGTATGACGTCTGATAAGTACGCGATGTGGGCGATAATCCCTGCATTAGGCATGTTAATCGGCGCCAGTATCTG TAATCGGATCCGTCCCTTAATCGGTAGTAAGAAACTCCTGCTATATACGCCAGTGTTGCACCTAGCCGCAGCGGTGTGGT TGTTCTTCTGCCCAGTCGAGCCTTTATACTTAATGTTGGGACAACTACTGATGATTCTAGGTAACAGTATCGCCTTACCT TGTGTTCAAGCCATGGTGATGCAGCCATACAAGAAACAAGCGGGAGCGGCGGCAGCGATGTCTGGAGGCGGACAGATGGT GGTTTCCTCAATAGTCAGTATGGTACTGATAAATTTAGGATTAAGCCAAGCCTGGCAGCTTTCTTTGATCATTGTCGTCT TTGCAATAATCACGCTCATTAATGTTATGCGTGGTTTTGCCACCCAAGAAGCCATGCAATCAATCACGACTAAACAATAA
Upstream 100 bases:
>100_bases AACGTGTCAAAGCCAAATTAGGTACATTTGACGATGAAGGCAGCTTGAGACGCAGAGGAAAAGCCGCCTCAACCTCGAAT GATACTGAGTGAGCAGGATT
Downstream 100 bases:
>100_bases TACTAAAGAGACCACCCAAGCTGAGGATGTGATGGCAAGAGTTGTCAATAAAGTGAGCCCCGTAAAGCCTGACTCAATGT AATGGTAGAAAAAAGAGAAA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSRVMNFKAILLACLIISVGQLSMGLVFPSLPWIAKDFSVSHEQVQILVSIYLLGFGPSQFFYGPISDALGRKKVLLIGL MIAMLGLLMIIFLSHSFTGMVLGRFLQGLGTGCCAVLARASTRDNFSGAELPVAMSYIAMVASITPLFAPVLGGFINFHF GWTMVFISLLGYLTLVWAVAALRFQETIDHPSPLPSPKKVLLQYRELLSSRYFMSFASIGWLNFSLMITTISVMPFIMQN QIGMTSDKYAMWAIIPALGMLIGASICNRIRPLIGSKKLLLYTPVLHLAAAVWLFFCPVEPLYLMLGQLLMILGNSIALP CVQAMVMQPYKKQAGAAAAMSGGGQMVVSSIVSMVLINLGLSQAWQLSLIIVVFAIITLINVMRGFATQEAMQSITTKQ
Sequences:
>Translated_399_residues MSRVMNFKAILLACLIISVGQLSMGLVFPSLPWIAKDFSVSHEQVQILVSIYLLGFGPSQFFYGPISDALGRKKVLLIGL MIAMLGLLMIIFLSHSFTGMVLGRFLQGLGTGCCAVLARASTRDNFSGAELPVAMSYIAMVASITPLFAPVLGGFINFHF GWTMVFISLLGYLTLVWAVAALRFQETIDHPSPLPSPKKVLLQYRELLSSRYFMSFASIGWLNFSLMITTISVMPFIMQN QIGMTSDKYAMWAIIPALGMLIGASICNRIRPLIGSKKLLLYTPVLHLAAAVWLFFCPVEPLYLMLGQLLMILGNSIALP CVQAMVMQPYKKQAGAAAAMSGGGQMVVSSIVSMVLINLGLSQAWQLSLIIVVFAIITLINVMRGFATQEAMQSITTKQ >Mature_398_residues SRVMNFKAILLACLIISVGQLSMGLVFPSLPWIAKDFSVSHEQVQILVSIYLLGFGPSQFFYGPISDALGRKKVLLIGLM IAMLGLLMIIFLSHSFTGMVLGRFLQGLGTGCCAVLARASTRDNFSGAELPVAMSYIAMVASITPLFAPVLGGFINFHFG WTMVFISLLGYLTLVWAVAALRFQETIDHPSPLPSPKKVLLQYRELLSSRYFMSFASIGWLNFSLMITTISVMPFIMQNQ IGMTSDKYAMWAIIPALGMLIGASICNRIRPLIGSKKLLLYTPVLHLAAAVWLFFCPVEPLYLMLGQLLMILGNSIALPC VQAMVMQPYKKQAGAAAAMSGGGQMVVSSIVSMVLINLGLSQAWQLSLIIVVFAIITLINVMRGFATQEAMQSITTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtL (TC 2.A.1.2.22) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790146, Length=374, Percent_Identity=28.0748663101604, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI87082312, Length=365, Percent_Identity=26.027397260274, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788509, Length=354, Percent_Identity=23.1638418079096, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI48994889, Length=342, Percent_Identity=25.7309941520468, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790794, Length=246, Percent_Identity=26.4227642276423, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43560; Mature: 43429
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVMNFKAILLACLIISVGQLSMGLVFPSLPWIAKDFSVSHEQVQILVSIYLLGFGPSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCC FFYGPISDALGRKKVLLIGLMIAMLGLLMIIFLSHSFTGMVLGRFLQGLGTGCCAVLARA CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHH STRDNFSGAELPVAMSYIAMVASITPLFAPVLGGFINFHFGWTMVFISLLGYLTLVWAVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRFQETIDHPSPLPSPKKVLLQYRELLSSRYFMSFASIGWLNFSLMITTISVMPFIMQN HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QIGMTSDKYAMWAIIPALGMLIGASICNRIRPLIGSKKLLLYTPVLHLAAAVWLFFCPVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC PLYLMLGQLLMILGNSIALPCVQAMVMQPYKKQAGAAAAMSGGGQMVVSSIVSMVLINLG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHC LSQAWQLSLIIVVFAIITLINVMRGFATQEAMQSITTKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRVMNFKAILLACLIISVGQLSMGLVFPSLPWIAKDFSVSHEQVQILVSIYLLGFGPSQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCC FFYGPISDALGRKKVLLIGLMIAMLGLLMIIFLSHSFTGMVLGRFLQGLGTGCCAVLARA CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHH STRDNFSGAELPVAMSYIAMVASITPLFAPVLGGFINFHFGWTMVFISLLGYLTLVWAVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRFQETIDHPSPLPSPKKVLLQYRELLSSRYFMSFASIGWLNFSLMITTISVMPFIMQN HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QIGMTSDKYAMWAIIPALGMLIGASICNRIRPLIGSKKLLLYTPVLHLAAAVWLFFCPVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC PLYLMLGQLLMILGNSIALPCVQAMVMQPYKKQAGAAAAMSGGGQMVVSSIVSMVLINLG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHC LSQAWQLSLIIVVFAIITLINVMRGFATQEAMQSITTKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]