| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962573
Identifier: 157962573
GI number: 157962573
Start: 3363498
End: 3364316
Strand: Direct
Name: 157962573
Synonym: Spea_2752
Alternate gene names: NA
Gene position: 3363498-3364316 (Clockwise)
Preceding gene: 157962572
Following gene: 157962576
Centisome position: 65.0
GC content: 45.54
Gene sequence:
>819_bases ATGCTTGGAACCTTAAGAAAAATGCGCAGCCACTTAGATGAGAATAATGTGGTTCAATACCAACTGCCTGTTGGCGAAGA GTTACTGGATCTTAATCCGCTAATTGGTAGTCAATTAACCCTTACCCATACTGGAAAAATACTCTGCTGTAACTGCGGCA AGAAAACCAAGAAGAGCTACTCACAGGGCCACTGCTACGTTTGTATGCAAAAATTGGCAAGCTGCGACATGTGTATTATG AAGCCAGAAACTTGCCATTACGCTGCGGGCACCTGCCGTGAGCCGTCTTGGGGAGAGGCTAATTGCTTCGTGCCACATTA TGTCTACCTATCGAATACATCTGGCGTAAAGGTGGGTATTACGCGCCATACACAACTGCCGACACGCTGGATAGATCAGG GCGCGACTCAGGGCCTACCTATTTTTAAGGTAGAAACACGTTTAGTTTCAGGCTTGGTCGAAACAGCCCTGGCTAAAATG ATCGCAGACAAGACGAATTGGCGCACTATGCTTAAAGGTAACGCCGATGAACTGGATCTTAAGCAGCAGGCTGAAACATT AATTCCGCATATTGCTGAACGCCTACAGGAGATCACCGCCGAACATGGCGAGTTTGCAGTATCTCAGCTTGATGAGCCGA TTCAAGCCATCAACTACCCTGTGAGTGAGTTTCCGACCAAGATAAGCTCACATAACTTTGATAAAAACCCAGAAGTATCA GGCATTTTAAAAGGCATAAAAGGCCAATACTTGATCTTCGATACAGGGGTGATTAACGTGCGAAAATTTGGCTCTTACGA AGTAAGCGTTAACTACTAA
Upstream 100 bases:
>100_bases CCTCTAGCCATATGCAATTCATAGCAATCGAAAAAACCATTCCTAAGCAGCTTTAACAATCTGTTAGACTAAGGCAAATT CTGATAGAAATAGAAATGTC
Downstream 100 bases:
>100_bases ACGATTTAATGATCTTAATGTATTAATTAAAAATGCCCTGCGGTTGCAGGGCATTTTTATTTGAACACTCTCGGCGACTT TAAGTGTCGATTTGAAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLGTLRKMRSHLDENNVVQYQLPVGEELLDLNPLIGSQLTLTHTGKILCCNCGKKTKKSYSQGHCYVCMQKLASCDMCIM KPETCHYAAGTCREPSWGEANCFVPHYVYLSNTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVETRLVSGLVETALAKM IADKTNWRTMLKGNADELDLKQQAETLIPHIAERLQEITAEHGEFAVSQLDEPIQAINYPVSEFPTKISSHNFDKNPEVS GILKGIKGQYLIFDTGVINVRKFGSYEVSVNY
Sequences:
>Translated_272_residues MLGTLRKMRSHLDENNVVQYQLPVGEELLDLNPLIGSQLTLTHTGKILCCNCGKKTKKSYSQGHCYVCMQKLASCDMCIM KPETCHYAAGTCREPSWGEANCFVPHYVYLSNTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVETRLVSGLVETALAKM IADKTNWRTMLKGNADELDLKQQAETLIPHIAERLQEITAEHGEFAVSQLDEPIQAINYPVSEFPTKISSHNFDKNPEVS GILKGIKGQYLIFDTGVINVRKFGSYEVSVNY >Mature_272_residues MLGTLRKMRSHLDENNVVQYQLPVGEELLDLNPLIGSQLTLTHTGKILCCNCGKKTKKSYSQGHCYVCMQKLASCDMCIM KPETCHYAAGTCREPSWGEANCFVPHYVYLSNTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVETRLVSGLVETALAKM IADKTNWRTMLKGNADELDLKQQAETLIPHIAERLQEITAEHGEFAVSQLDEPIQAINYPVSEFPTKISSHNFDKNPEVS GILKGIKGQYLIFDTGVINVRKFGSYEVSVNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30383; Mature: 30383
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGTLRKMRSHLDENNVVQYQLPVGEELLDLNPLIGSQLTLTHTGKILCCNCGKKTKKSY CCCHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCEEEEEECCEEEEECCCCHHHHHC SQGHCYVCMQKLASCDMCIMKPETCHYAAGTCREPSWGEANCFVPHYVYLSNTSGVKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVETRLVSGLVETALAKMIADKTNWRTMLKGNADELDL EECCCCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH KQQAETLIPHIAERLQEITAEHGEFAVSQLDEPIQAINYPVSEFPTKISSHNFDKNPEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCCCCHH GILKGIKGQYLIFDTGVINVRKFGSYEVSVNY HHHHCCCCCEEEEECCEEEEEECCCEEEEECC >Mature Secondary Structure MLGTLRKMRSHLDENNVVQYQLPVGEELLDLNPLIGSQLTLTHTGKILCCNCGKKTKKSY CCCHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCEEEEEECCEEEEECCCCHHHHHC SQGHCYVCMQKLASCDMCIMKPETCHYAAGTCREPSWGEANCFVPHYVYLSNTSGVKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVETRLVSGLVETALAKMIADKTNWRTMLKGNADELDL EECCCCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH KQQAETLIPHIAERLQEITAEHGEFAVSQLDEPIQAINYPVSEFPTKISSHNFDKNPEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCCCCHH GILKGIKGQYLIFDTGVINVRKFGSYEVSVNY HHHHCCCCCEEEEECCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA