| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962570
Identifier: 157962570
GI number: 157962570
Start: 3359535
End: 3360245
Strand: Direct
Name: 157962570
Synonym: Spea_2749
Alternate gene names: NA
Gene position: 3359535-3360245 (Clockwise)
Preceding gene: 157962567
Following gene: 157962572
Centisome position: 64.92
GC content: 49.23
Gene sequence:
>711_bases ATGAAACTTAATCATATCTCCTTAGCAGTCATTTTATCTTTCGCTGTCTCAGCCTGTGGAAGTGACAGTAGAAGCGATAG CCCGCCGCAGATCGATAACTTACCGTCTCGCAGCGCCCCCGTCCCTGAAAAGCCACCAATTTTGCCCGACGATGGCTTGC CGATAGAGGACCCATGCACTAGCAACTGTGGCAGTGATACGCCACCACGCGATGAGGATACGCCAATAGTGCCAATTCCA GATGTGCCACTAATAGCAAACGTGAATATAGTGAGCCATGAGATCCATAAGCAAGTCGGCACCGTTGAAATGCACCACGT TGTGACGGGGAAAGCTGAGGATCAGTCACGGCTAGTCCCCTACCCAAGCGTTCGATACTACGTGACTCACAGTGAAGATG TAACGGTTCTGGATCTGCAACCGACTATCGGCTGGGTAAACATCTACACCATCTGGAACCACCCACAAGGGGAACGCAAA TGCCGTTTAGATGTCTTCCCCGATAGCACGGTTAAATCCAGCTGTACCACAGATAACACCTGGTTTGGCAGTGTGGCTGC AGCAGTGAAGTATCACGATGGAGGCTTAACTTTGGATATGAACTTCTTCGATGGCAATCAAGGTGTCAATTACGCATGGC GTATTGCTGAGAACTCAAGCCAACAACCGCTGTATGAGCACAATACTTTCATGTACGTTGAACACAAGTAA
Upstream 100 bases:
>100_bases TAAACAGTGCTTATCTCTTAGATAAACTCTAGTCAATTTAGTTTATCTGACTACCAGTGTAAATTGGTGCTATGAATTTA ATCTGTAAAAGGTTCTCTCT
Downstream 100 bases:
>100_bases CACTTTAATTCAATGATGAGTGATGCTGTAAATAGCTAAAACTCGCTTTTGCGAGATTAGAAAAAGATCGTGATGTACTT TCACCAAGGTGAAAAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKLNHISLAVILSFAVSACGSDSRSDSPPQIDNLPSRSAPVPEKPPILPDDGLPIEDPCTSNCGSDTPPRDEDTPIVPIP DVPLIANVNIVSHEIHKQVGTVEMHHVVTGKAEDQSRLVPYPSVRYYVTHSEDVTVLDLQPTIGWVNIYTIWNHPQGERK CRLDVFPDSTVKSSCTTDNTWFGSVAAAVKYHDGGLTLDMNFFDGNQGVNYAWRIAENSSQQPLYEHNTFMYVEHK
Sequences:
>Translated_236_residues MKLNHISLAVILSFAVSACGSDSRSDSPPQIDNLPSRSAPVPEKPPILPDDGLPIEDPCTSNCGSDTPPRDEDTPIVPIP DVPLIANVNIVSHEIHKQVGTVEMHHVVTGKAEDQSRLVPYPSVRYYVTHSEDVTVLDLQPTIGWVNIYTIWNHPQGERK CRLDVFPDSTVKSSCTTDNTWFGSVAAAVKYHDGGLTLDMNFFDGNQGVNYAWRIAENSSQQPLYEHNTFMYVEHK >Mature_236_residues MKLNHISLAVILSFAVSACGSDSRSDSPPQIDNLPSRSAPVPEKPPILPDDGLPIEDPCTSNCGSDTPPRDEDTPIVPIP DVPLIANVNIVSHEIHKQVGTVEMHHVVTGKAEDQSRLVPYPSVRYYVTHSEDVTVLDLQPTIGWVNIYTIWNHPQGERK CRLDVFPDSTVKSSCTTDNTWFGSVAAAVKYHDGGLTLDMNFFDGNQGVNYAWRIAENSSQQPLYEHNTFMYVEHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26150; Mature: 26150
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNHISLAVILSFAVSACGSDSRSDSPPQIDNLPSRSAPVPEKPPILPDDGLPIEDPCT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNCGSDTPPRDEDTPIVPIPDVPLIANVNIVSHEIHKQVGTVEMHHVVTGKAEDQSRLVP CCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCC YPSVRYYVTHSEDVTVLDLQPTIGWVNIYTIWNHPQGERKCRLDVFPDSTVKSSCTTDNT CCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC WFGSVAAAVKYHDGGLTLDMNFFDGNQGVNYAWRIAENSSQQPLYEHNTFMYVEHK CCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEECCCEEEEEEC >Mature Secondary Structure MKLNHISLAVILSFAVSACGSDSRSDSPPQIDNLPSRSAPVPEKPPILPDDGLPIEDPCT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNCGSDTPPRDEDTPIVPIPDVPLIANVNIVSHEIHKQVGTVEMHHVVTGKAEDQSRLVP CCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCC YPSVRYYVTHSEDVTVLDLQPTIGWVNIYTIWNHPQGERKCRLDVFPDSTVKSSCTTDNT CCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC WFGSVAAAVKYHDGGLTLDMNFFDGNQGVNYAWRIAENSSQQPLYEHNTFMYVEHK CCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA