| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962567
Identifier: 157962567
GI number: 157962567
Start: 3356864
End: 3357364
Strand: Direct
Name: 157962567
Synonym: Spea_2746
Alternate gene names: NA
Gene position: 3356864-3357364 (Clockwise)
Preceding gene: 157962560
Following gene: 157962570
Centisome position: 64.87
GC content: 42.51
Gene sequence:
>501_bases ATGTTAAGATATCTAATTACCCTGCAAGCAAAGGATAGAGAAGGCTTAGTAGAACAAATAGCCCACGCAGTGAGTCGCCA TGGGGGAAATTGGCTAGACTCTGAACTGCGCCATATTGATGGAATTTTTGCCGCGATATTACTGTTAGAGGTCCCCGCCG CTCACTGGGATGAACTTATTGAAAGTTTAGAGCTACTAGAGGGAATATCATTAACCTACGCCAAATCCACTAAACCTCAA GCTAAAAACAAACATGTTAGTTACTCATTAGTGGCATACGACAGACCCGGTCTAGTACATGAAATATCGAATAAAATTAG TGCACTTGGGATTAATATCGAACATATGAGCACCCGCTACGAAAGTGCCAGTCACACTGGTATTGCACTGTTTAGAGCCG ATTTTAATGTCAGCATGAAAGACAGTCTCGATGAAGAAAGATTGACTCAGGCTCTTCACAGCATCGGGGATGATGTGGTG TTAGATAACCTGTCAGCTTAA
Upstream 100 bases:
>100_bases ATCAAATTTTTACGGTAATAACTGGGACAAAACAGGTCTATCTATTTAAGATCTAGCAAGAATATACGCATTGGCATGAT AAATAATGGAGTAATATCAA
Downstream 100 bases:
>100_bases TTAGCATCGAGCCTGATTTATTGTTAAATCAGGCTCTCATATTGAGAGCTACCTCATCGGGAAAATAACGGCAGCTAATG AATGGTATTAGCTATCGAAT
Product: amino acid-binding ACT domain-containing protein
Products: NA
Alternate protein names: ACT Domain Protein; Glycine Cleavage System Regulatory Protein; ACT Domain-Containing Regulatory Protein; Glycine Cleavage System Transcriptional Repressor; Phosphoserine Phosphatase
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MLRYLITLQAKDREGLVEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPAAHWDELIESLELLEGISLTYAKSTKPQ AKNKHVSYSLVAYDRPGLVHEISNKISALGINIEHMSTRYESASHTGIALFRADFNVSMKDSLDEERLTQALHSIGDDVV LDNLSA
Sequences:
>Translated_166_residues MLRYLITLQAKDREGLVEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPAAHWDELIESLELLEGISLTYAKSTKPQ AKNKHVSYSLVAYDRPGLVHEISNKISALGINIEHMSTRYESASHTGIALFRADFNVSMKDSLDEERLTQALHSIGDDVV LDNLSA >Mature_166_residues MLRYLITLQAKDREGLVEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPAAHWDELIESLELLEGISLTYAKSTKPQ AKNKHVSYSLVAYDRPGLVHEISNKISALGINIEHMSTRYESASHTGIALFRADFNVSMKDSLDEERLTQALHSIGDDVV LDNLSA
Specific function: Unknown
COG id: COG2716
COG function: function code E; Glycine cleavage system regulatory protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18472; Mature: 18472
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYLITLQAKDREGLVEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPAAHWDELI CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ESLELLEGISLTYAKSTKPQAKNKHVSYSLVAYDRPGLVHEISNKISALGINIEHMSTRY HHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHH ESASHTGIALFRADFNVSMKDSLDEERLTQALHSIGDDVVLDNLSA CCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCHHCCCCC >Mature Secondary Structure MLRYLITLQAKDREGLVEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPAAHWDELI CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ESLELLEGISLTYAKSTKPQAKNKHVSYSLVAYDRPGLVHEISNKISALGINIEHMSTRY HHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHH ESASHTGIALFRADFNVSMKDSLDEERLTQALHSIGDDVVLDNLSA CCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA