| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962560
Identifier: 157962560
GI number: 157962560
Start: 3347332
End: 3347583
Strand: Direct
Name: 157962560
Synonym: Spea_2739
Alternate gene names: NA
Gene position: 3347332-3347583 (Clockwise)
Preceding gene: 157962552
Following gene: 157962567
Centisome position: 64.69
GC content: 46.43
Gene sequence:
>252_bases ATGAAGCAATCACCTTGTGTAGCCAAATGTGGCCTAAATGATGAAGATTATTGTATGGGCTGCTATCGCCATATCGATGA GATAGTCGGTTGGGGAAGTGCCAGCGATGAGCGAAAAGCGCAGATCTGGCAAAATCTGGCCGAACGAAAAGCATTGATGC AAGGCGGAGAAAACAGTGCCATTTTAAGTCGTGCTAAATGGTTAGAGGCTGAGAAAAGGTTGAAGCCTGCAGAGTCAGAC GAAATCAGCTAG
Upstream 100 bases:
>100_bases CTCTACCCATTTGTCGTTTAAATGAGTTTCACTTGTAAGCTAATTCTAGCTAACTTAAAATCTGCCGCAAATTCGAACAA CAAATGTCATATCGAGCTTT
Downstream 100 bases:
>100_bases ATAGTAAAAGAGCCGCTATATGCGGCTCTTTTACTATCTAGCGGTATTACTTTTTCAGCATACTCTTTAAATCCGCGAAC GGATTATAAGTCGCTGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MKQSPCVAKCGLNDEDYCMGCYRHIDEIVGWGSASDERKAQIWQNLAERKALMQGGENSAILSRAKWLEAEKRLKPAESD EIS
Sequences:
>Translated_83_residues MKQSPCVAKCGLNDEDYCMGCYRHIDEIVGWGSASDERKAQIWQNLAERKALMQGGENSAILSRAKWLEAEKRLKPAESD EIS >Mature_83_residues MKQSPCVAKCGLNDEDYCMGCYRHIDEIVGWGSASDERKAQIWQNLAERKALMQGGENSAILSRAKWLEAEKRLKPAESD EIS
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9346; Mature: 9346
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSPCVAKCGLNDEDYCMGCYRHIDEIVGWGSASDERKAQIWQNLAERKALMQGGENSA CCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH ILSRAKWLEAEKRLKPAESDEIS HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKQSPCVAKCGLNDEDYCMGCYRHIDEIVGWGSASDERKAQIWQNLAERKALMQGGENSA CCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH ILSRAKWLEAEKRLKPAESDEIS HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA