| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962547
Identifier: 157962547
GI number: 157962547
Start: 3331944
End: 3332681
Strand: Direct
Name: 157962547
Synonym: Spea_2726
Alternate gene names: NA
Gene position: 3331944-3332681 (Clockwise)
Preceding gene: 157962546
Following gene: 157962549
Centisome position: 64.39
GC content: 42.01
Gene sequence:
>738_bases ATGAATAATAACGACAATACTACTGAGACTCAGGGAAAACTAGCAAGAATTATTGCCCTTGTGTCTTTGGTTGCTATCGC CTTAGGTGGTTTTAATGACACTACCGATGCACTGAAGAAAATCTATGATTTCTCATTATCCAAATTTACTGATATCCCTT CGCAAAGTAAGCTGGACAAGATTTATATCCGGGCGTCATCTGACATCCTCGAAGAAAATTTTGGTGCCCCCGTGTATATC AAACACACTTACAAAGGGGATGTGATCAAATACTATCGAGATGACCGATTCGTCCTGTCAGCCATTAGTAAAGATGGCGC TATCTCAGCCTATCTAGTGTTTCCAAAAGCAGGTTTCAGTGCTGACACTAAGGCTTCTGCCGGAGGTAGCGATCTACTGA CAACCTCTTTTAGTCACCAAGAATCGGTAAATGATGTTCGCGCAACACTTTCGAAAACAATAACTTACTATATAGAAGAA AACACCAATGGCGACTTCAGTAACCTATACTCATCAGTCAGTGGTTATAGCGAGTTCAATAACACATTGGACGCAGGAAA AAGAGCGACTTTAGCCAAATTGGTCGATGATATGCTATTAGGTGAAAATATCGCACCGTCGGCCATAGCAGTGAGGGAAC AATTTACGCCCAACTTTTATGGCTATAGCACCTTGGGGCTAGGCGCTTTGGAGGAAGCTATTTTAACCCAATCAGAATTC CGCCTCATCAATCCATAA
Upstream 100 bases:
>100_bases TCGATCTTTTCGGTCAGAATACTATCGATCAGATAGAAGAAGCCGTTGAAGATAGTAAAGACGATATATTAGACAAGCTA AAAGATATTAACGAGTAAAA
Downstream 100 bases:
>100_bases CCCTGTTAAACCAAACTGTAAATTGGGTCTCATGACAGGTAAAGGTCCAATTTACAGTTTTCCCTCAGTTATATGCTCGA ATGATCTCAGTTTAGCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNNNDNTTETQGKLARIIALVSLVAIALGGFNDTTDALKKIYDFSLSKFTDIPSQSKLDKIYIRASSDILEENFGAPVYI KHTYKGDVIKYYRDDRFVLSAISKDGAISAYLVFPKAGFSADTKASAGGSDLLTTSFSHQESVNDVRATLSKTITYYIEE NTNGDFSNLYSSVSGYSEFNNTLDAGKRATLAKLVDDMLLGENIAPSAIAVREQFTPNFYGYSTLGLGALEEAILTQSEF RLINP
Sequences:
>Translated_245_residues MNNNDNTTETQGKLARIIALVSLVAIALGGFNDTTDALKKIYDFSLSKFTDIPSQSKLDKIYIRASSDILEENFGAPVYI KHTYKGDVIKYYRDDRFVLSAISKDGAISAYLVFPKAGFSADTKASAGGSDLLTTSFSHQESVNDVRATLSKTITYYIEE NTNGDFSNLYSSVSGYSEFNNTLDAGKRATLAKLVDDMLLGENIAPSAIAVREQFTPNFYGYSTLGLGALEEAILTQSEF RLINP >Mature_245_residues MNNNDNTTETQGKLARIIALVSLVAIALGGFNDTTDALKKIYDFSLSKFTDIPSQSKLDKIYIRASSDILEENFGAPVYI KHTYKGDVIKYYRDDRFVLSAISKDGAISAYLVFPKAGFSADTKASAGGSDLLTTSFSHQESVNDVRATLSKTITYYIEE NTNGDFSNLYSSVSGYSEFNNTLDAGKRATLAKLVDDMLLGENIAPSAIAVREQFTPNFYGYSTLGLGALEEAILTQSEF RLINP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26806; Mature: 26806
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNDNTTETQGKLARIIALVSLVAIALGGFNDTTDALKKIYDFSLSKFTDIPSQSKLDK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE IYIRASSDILEENFGAPVYIKHTYKGDVIKYYRDDRFVLSAISKDGAISAYLVFPKAGFS EEEEECHHHHHHCCCCCEEEEECCCCCEEEEECCCHHEEEHHCCCCCEEEEEEECCCCCC ADTKASAGGSDLLTTSFSHQESVNDVRATLSKTITYYIEENTNGDFSNLYSSVSGYSEFN CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH NTLDAGKRATLAKLVDDMLLGENIAPSAIAVREQFTPNFYGYSTLGLGALEEAILTQSEF HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCE RLINP EECCC >Mature Secondary Structure MNNNDNTTETQGKLARIIALVSLVAIALGGFNDTTDALKKIYDFSLSKFTDIPSQSKLDK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE IYIRASSDILEENFGAPVYIKHTYKGDVIKYYRDDRFVLSAISKDGAISAYLVFPKAGFS EEEEECHHHHHHCCCCCEEEEECCCCCEEEEECCCHHEEEHHCCCCCEEEEEEECCCCCC ADTKASAGGSDLLTTSFSHQESVNDVRATLSKTITYYIEENTNGDFSNLYSSVSGYSEFN CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH NTLDAGKRATLAKLVDDMLLGENIAPSAIAVREQFTPNFYGYSTLGLGALEEAILTQSEF HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCE RLINP EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA