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The map label for this gene is cdaR [H]

Identifier: 157962524

GI number: 157962524

Start: 3302028

End: 3303179

Strand: Direct

Name: cdaR [H]

Synonym: Spea_2703

Alternate gene names: 157962524

Gene position: 3302028-3303179 (Clockwise)

Preceding gene: 157962523

Following gene: 157962525

Centisome position: 63.81

GC content: 46.09

Gene sequence:

>1152_bases
GTGTATTTTCTAGATGGCTCCTTGGCACGACAAATCGTTAATCGCACCATGAAGATTATTGGTCATAATATCAATGTGAT
GAATAATCATGGCGTCATTTTAGGCTCGGGAGAGTCTCACCGGATCGGCGCCATACACGAAGGTGCACTGCTGGCTATCA
GTCAAAAACGCACCGTAGAGATTAGCACTCACAGCACTGGCACACTGCAAGGTGTTAAACCGGGAATTAACCTGCCACTA
CATTATAAAGGCAAGGTTATCGGCGTTATCGGCATCACTGGCGAGCCTGAAAAGCTTCGTAGTTATGGTGAGCTACTGAA
GATGACCGCTGAAATCATCGTTGAGCAGGCTAACACGCTTGAACAAGCTCAGTGGCAGTACCGCCAAAAGGAAGAGTTGA
TCATCGAGTTAATTAAGTCTGAGGGCGCTTTTACTTCCCACCAGCGTAATTGGGCTTCTCAGCTTAATATCGATCTCGAT
GCACCGCGCGTTGTGGCTATAATTCAAGTTCAGGCCGACGAGGAAGAAACCACGGCTAACTCTATGTTGAAGCAGGTTAT
GCATCTATTAGAAAATCCATCGCGGGGCAACTTAGTCGCCATGGCCTCGATGACGGAGTTAGTTATTTTAAAACCTGCCT
TTCTCGATGGAAAGACTTGGGATCCTAACCTTGAGAGTGAGCGTATCGATCAACTACTCATACGGCTTCCCAAAGAACTT
AATAGCCGCTTAAAAATCTCATTAGGCCATTTTTTTTCAAACCCAGAAGAGATCAACCGCTCCTACCAAACCGCACTAGA
AACCTTAGCTATCGGCCAGCAGCTCCACCCTGAGCAAAGTAAATACCTCTACGAGGATTACTCTCTACAGGTATTGCTGT
CGGCGTTAAAAGATAGCTGGCGCGGTAAAGAGCTACTCTGCCCTTACCAAGCCCTCCTTAGCGCCGATAAAAATGGCCAG
CTAGTGAAAACCCTGACTGCTTACCTGCAACACTTTGGTGACCTGCAGCAATGTGCTAATGTACTTTTTATTCATCGAAA
TACCTTGCGCTATCGACTCGATAAAATCCAACAGATCACTGGCGCCAATATCAATCAACTCGATGGGTTATTGCAGCTCT
ATATAGGCCAAGTGATGCTTAAGCAAACTTAA

Upstream 100 bases:

>100_bases
AATTAGCCGATAAAGTAATGACAGATGTCGACGCTTTGGGGCACTGTATCGCCACTCTAAGTAAAACAATCTGCAGATTT
AAACGTTAGTGAGGCTCAAC

Downstream 100 bases:

>100_bases
CAACGGGAACAAAATGACATTCGCCTCTACACGCAGAACAGGCTTTACCTTAATTGAAATGGTTGTGGTAATCATTGTGC
TTGGGATCATAGCTGTTATT

Product: transcriptional regulator CdaR

Products: NA

Alternate protein names: Sugar diacid regulator [H]

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MYFLDGSLARQIVNRTMKIIGHNINVMNNHGVILGSGESHRIGAIHEGALLAISQKRTVEISTHSTGTLQGVKPGINLPL
HYKGKVIGVIGITGEPEKLRSYGELLKMTAEIIVEQANTLEQAQWQYRQKEELIIELIKSEGAFTSHQRNWASQLNIDLD
APRVVAIIQVQADEEETTANSMLKQVMHLLENPSRGNLVAMASMTELVILKPAFLDGKTWDPNLESERIDQLLIRLPKEL
NSRLKISLGHFFSNPEEINRSYQTALETLAIGQQLHPEQSKYLYEDYSLQVLLSALKDSWRGKELLCPYQALLSADKNGQ
LVKTLTAYLQHFGDLQQCANVLFIHRNTLRYRLDKIQQITGANINQLDGLLQLYIGQVMLKQT

Sequences:

>Translated_383_residues
MYFLDGSLARQIVNRTMKIIGHNINVMNNHGVILGSGESHRIGAIHEGALLAISQKRTVEISTHSTGTLQGVKPGINLPL
HYKGKVIGVIGITGEPEKLRSYGELLKMTAEIIVEQANTLEQAQWQYRQKEELIIELIKSEGAFTSHQRNWASQLNIDLD
APRVVAIIQVQADEEETTANSMLKQVMHLLENPSRGNLVAMASMTELVILKPAFLDGKTWDPNLESERIDQLLIRLPKEL
NSRLKISLGHFFSNPEEINRSYQTALETLAIGQQLHPEQSKYLYEDYSLQVLLSALKDSWRGKELLCPYQALLSADKNGQ
LVKTLTAYLQHFGDLQQCANVLFIHRNTLRYRLDKIQQITGANINQLDGLLQLYIGQVMLKQT
>Mature_383_residues
MYFLDGSLARQIVNRTMKIIGHNINVMNNHGVILGSGESHRIGAIHEGALLAISQKRTVEISTHSTGTLQGVKPGINLPL
HYKGKVIGVIGITGEPEKLRSYGELLKMTAEIIVEQANTLEQAQWQYRQKEELIIELIKSEGAFTSHQRNWASQLNIDLD
APRVVAIIQVQADEEETTANSMLKQVMHLLENPSRGNLVAMASMTELVILKPAFLDGKTWDPNLESERIDQLLIRLPKEL
NSRLKISLGHFFSNPEEINRSYQTALETLAIGQQLHPEQSKYLYEDYSLQVLLSALKDSWRGKELLCPYQALLSADKNGQ
LVKTLTAYLQHFGDLQQCANVLFIHRNTLRYRLDKIQQITGANINQLDGLLQLYIGQVMLKQT

Specific function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization [H]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=376, Percent_Identity=44.1489361702128, Blast_Score=320, Evalue=7e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 43152; Mature: 43152

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFLDGSLARQIVNRTMKIIGHNINVMNNHGVILGSGESHRIGAIHEGALLAISQKRTVE
CEEECHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCEEEEECCEEEEEECCCEEE
ISTHSTGTLQGVKPGINLPLHYKGKVIGVIGITGEPEKLRSYGELLKMTAEIIVEQANTL
EECCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQAQWQYRQKEELIIELIKSEGAFTSHQRNWASQLNIDLDAPRVVAIIQVQADEEETTAN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHH
SMLKQVMHLLENPSRGNLVAMASMTELVILKPAFLDGKTWDPNLESERIDQLLIRLPKEL
HHHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHH
NSRLKISLGHFFSNPEEINRSYQTALETLAIGQQLHPEQSKYLYEDYSLQVLLSALKDSW
CCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
RGKELLCPYQALLSADKNGQLVKTLTAYLQHFGDLQQCANVLFIHRNTLRYRLDKIQQIT
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEECHHHHHHHHHHHHHC
GANINQLDGLLQLYIGQVMLKQT
CCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYFLDGSLARQIVNRTMKIIGHNINVMNNHGVILGSGESHRIGAIHEGALLAISQKRTVE
CEEECHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCEEEEECCEEEEEECCCEEE
ISTHSTGTLQGVKPGINLPLHYKGKVIGVIGITGEPEKLRSYGELLKMTAEIIVEQANTL
EECCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQAQWQYRQKEELIIELIKSEGAFTSHQRNWASQLNIDLDAPRVVAIIQVQADEEETTAN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHH
SMLKQVMHLLENPSRGNLVAMASMTELVILKPAFLDGKTWDPNLESERIDQLLIRLPKEL
HHHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHH
NSRLKISLGHFFSNPEEINRSYQTALETLAIGQQLHPEQSKYLYEDYSLQVLLSALKDSW
CCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
RGKELLCPYQALLSADKNGQLVKTLTAYLQHFGDLQQCANVLFIHRNTLRYRLDKIQQIT
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEECHHHHHHHHHHHHHC
GANINQLDGLLQLYIGQVMLKQT
CCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10762278 [H]