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The map label for this gene is yfmJ [H]

Identifier: 157962443

GI number: 157962443

Start: 3191827

End: 3192825

Strand: Direct

Name: yfmJ [H]

Synonym: Spea_2622

Alternate gene names: 157962443

Gene position: 3191827-3192825 (Clockwise)

Preceding gene: 157962435

Following gene: 157962445

Centisome position: 61.68

GC content: 48.25

Gene sequence:

>999_bases
ATGAATATCCAAGAAATTCAATTGAAGTCTCGTCCAGAAGGCATGCCTACCGCCGACAACTTTGTTCTGGCAAAAGGGTC
AATCTCCCCAATAAAACAAGGCGAGTTCTTGGTCAAAAATTTATGGATGTCTGTGGACCCTTATATGCGCGGCCGTATGA
TTGACAGAAAAAGTTACATTGCTCCTTTCCAGATAGGTAAAGTATTAGAAGGCGGCGCTATTGGTGAAGTCATTGAGTCT
CTCAACCCGGCCTTTTCTATCGGCAGTAAGGTCAGCAGTATGCTTGGCTGGCGTAGTCACTTTGTTAGTGACGGAGCCGA
GATCACTATTTTGCCAAATACTCCGATTTCTGAGTCGCATTTCCTTGGGGTTCTCGGTATGCCTGGTATGACCGCTTGGA
CAGGACTCAATCGTATTGCACAATTAACAGCCGGTGAAACCTTGTTTGTCTCTGCTGCATCTGGTGCTGTTGGCAGCGTA
GTGGCACAGATAGGAAAACTCATGGGTGCGCGCGTTGTAGCCTCCGTCGGCTCAGATGAAAAAGCTCAATACCTGACCTC
GCTGGGTGTCGACGCCGTAATTAACTACAAAACTTGTGGCGATTTAGACGCCGCACTGGGTCACGCCGCCCCTGAAGGGA
TTGACGTCTACTTTGAAAATGTCGGTGGAGAGCATCTGAGCGCCGCACTAAATCATATGAAAGATCACGGCCGAATTGCC
GTGTGCGGCATGATAGCTCAGTATAATGACACAGCCCCTACGCCGGGACCGAGTAACCTTGCCCAGATCATTATTAAAAA
GTTAAAGATTGAAGGCTTTATCGTATTTGAACATTGGGATCACTACCCCCAATTTGCGGCGCAGATGGGGCAATGGCTAG
CCGAAGGCAAGGTGCAAGCAGAGCAAACTATTTATGAAGGCTTAGAAAACGCACCCGATGCATTTATTGGGCTATTTGAG
GGGAAGAACCGCGGCAAGATGGTGGTTAAACTTGCTTGA

Upstream 100 bases:

>100_bases
TTGCGAGCAATTATTTTGCGCGCAAAGTAATTGCAAAATAAATTTTACCTGTCTATGATACTGACAATTACTTTGCGCAC
AAAACAATTTAAGGAATGAC

Downstream 100 bases:

>100_bases
AGCAAGCTAGAAAGTCCACTGGTAACTCATTACTTAGAATTTATCTAGATTAGCTTACGTGTGAAGTTTGACGTGAAAAG
CTTATCTGGAAAGCTATAGG

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNIQEIQLKSRPEGMPTADNFVLAKGSISPIKQGEFLVKNLWMSVDPYMRGRMIDRKSYIAPFQIGKVLEGGAIGEVIES
LNPAFSIGSKVSSMLGWRSHFVSDGAEITILPNTPISESHFLGVLGMPGMTAWTGLNRIAQLTAGETLFVSAASGAVGSV
VAQIGKLMGARVVASVGSDEKAQYLTSLGVDAVINYKTCGDLDAALGHAAPEGIDVYFENVGGEHLSAALNHMKDHGRIA
VCGMIAQYNDTAPTPGPSNLAQIIIKKLKIEGFIVFEHWDHYPQFAAQMGQWLAEGKVQAEQTIYEGLENAPDAFIGLFE
GKNRGKMVVKLA

Sequences:

>Translated_332_residues
MNIQEIQLKSRPEGMPTADNFVLAKGSISPIKQGEFLVKNLWMSVDPYMRGRMIDRKSYIAPFQIGKVLEGGAIGEVIES
LNPAFSIGSKVSSMLGWRSHFVSDGAEITILPNTPISESHFLGVLGMPGMTAWTGLNRIAQLTAGETLFVSAASGAVGSV
VAQIGKLMGARVVASVGSDEKAQYLTSLGVDAVINYKTCGDLDAALGHAAPEGIDVYFENVGGEHLSAALNHMKDHGRIA
VCGMIAQYNDTAPTPGPSNLAQIIIKKLKIEGFIVFEHWDHYPQFAAQMGQWLAEGKVQAEQTIYEGLENAPDAFIGLFE
GKNRGKMVVKLA
>Mature_332_residues
MNIQEIQLKSRPEGMPTADNFVLAKGSISPIKQGEFLVKNLWMSVDPYMRGRMIDRKSYIAPFQIGKVLEGGAIGEVIES
LNPAFSIGSKVSSMLGWRSHFVSDGAEITILPNTPISESHFLGVLGMPGMTAWTGLNRIAQLTAGETLFVSAASGAVGSV
VAQIGKLMGARVVASVGSDEKAQYLTSLGVDAVINYKTCGDLDAALGHAAPEGIDVYFENVGGEHLSAALNHMKDHGRIA
VCGMIAQYNDTAPTPGPSNLAQIIIKKLKIEGFIVFEHWDHYPQFAAQMGQWLAEGKVQAEQTIYEGLENAPDAFIGLFE
GKNRGKMVVKLA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=329, Percent_Identity=42.8571428571429, Blast_Score=248, Evalue=4e-66,
Organism=Homo sapiens, GI226059133, Length=329, Percent_Identity=42.8571428571429, Blast_Score=248, Evalue=4e-66,
Organism=Homo sapiens, GI226246682, Length=347, Percent_Identity=37.7521613832853, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI226246680, Length=347, Percent_Identity=37.7521613832853, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI22748929, Length=347, Percent_Identity=37.7521613832853, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI226056130, Length=301, Percent_Identity=41.5282392026578, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI28557745, Length=321, Percent_Identity=29.2834890965732, Blast_Score=118, Evalue=6e-27,
Organism=Escherichia coli, GI226510941, Length=331, Percent_Identity=42.5981873111783, Blast_Score=271, Evalue=3e-74,
Organism=Caenorhabditis elegans, GI133901712, Length=336, Percent_Identity=33.6309523809524, Blast_Score=181, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI133901710, Length=336, Percent_Identity=33.6309523809524, Blast_Score=181, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6323504, Length=330, Percent_Identity=28.4848484848485, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35622; Mature: 35622

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQEIQLKSRPEGMPTADNFVLAKGSISPIKQGEFLVKNLWMSVDPYMRGRMIDRKSYI
CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCEEECCHHCC
APFQIGKVLEGGAIGEVIESLNPAFSIGSKVSSMLGWRSHFVSDGAEITILPNTPISESH
CHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
FLGVLGMPGMTAWTGLNRIAQLTAGETLFVSAASGAVGSVVAQIGKLMGARVVASVGSDE
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCH
KAQYLTSLGVDAVINYKTCGDLDAALGHAAPEGIDVYFENVGGEHLSAALNHMKDHGRIA
HHHHHHHCCHHHEEECCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEE
VCGMIAQYNDTAPTPGPSNLAQIIIKKLKIEGFIVFEHWDHYPQFAAQMGQWLAEGKVQA
EEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCHHH
EQTIYEGLENAPDAFIGLFEGKNRGKMVVKLA
HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEC
>Mature Secondary Structure
MNIQEIQLKSRPEGMPTADNFVLAKGSISPIKQGEFLVKNLWMSVDPYMRGRMIDRKSYI
CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCEEECCHHCC
APFQIGKVLEGGAIGEVIESLNPAFSIGSKVSSMLGWRSHFVSDGAEITILPNTPISESH
CHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
FLGVLGMPGMTAWTGLNRIAQLTAGETLFVSAASGAVGSVVAQIGKLMGARVVASVGSDE
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCH
KAQYLTSLGVDAVINYKTCGDLDAALGHAAPEGIDVYFENVGGEHLSAALNHMKDHGRIA
HHHHHHHCCHHHEEECCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEE
VCGMIAQYNDTAPTPGPSNLAQIIIKKLKIEGFIVFEHWDHYPQFAAQMGQWLAEGKVQA
EEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCHHH
EQTIYEGLENAPDAFIGLFEGKNRGKMVVKLA
HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]