Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yceA [C]
Identifier: 157962345
GI number: 157962345
Start: 3075633
End: 3076616
Strand: Reverse
Name: yceA [C]
Synonym: Spea_2524
Alternate gene names: 157962345
Gene position: 3076616-3075633 (Counterclockwise)
Preceding gene: 157962347
Following gene: 157962344
Centisome position: 59.46
GC content: 44.72
Gene sequence:
>984_bases ATGTCAAAAGTCGTTGTCTGCGCCATGTATAAGTTTGTGACTTTAGCCGAATTTGAAAAATTACAAAGTCCGTTACAAAA GGTAATGGAAACCTCGGGTGTAAAAGGCTCACTACTATTAGCGCAAGAGGGCATTAACGGTACCGTCGCGGGCTCACAAT CTGCTATCGATAACTTATTGGCTTGGTTGGCCACTCAGCCTGGACTCGATAACATTGTTTATAAACTTTCGTTTGATGAT GTGATGCCTTTTTACCGCACCAAGGTCAAGCTGAAGAAAGAAATTGTCACCATGGGAGTCGAAGGCATCGATCCTAAAAA GGTGGTTGGTACCTATGTAAAACCAAAAGATTGGAATCAACTGATTTCCGATCCAGAAGTACTGCTTGTTGATACCCGTA ACGACTATGAAGTGCAAATTGGTACCTTCAAAGATGCGCTAGACCCAAAGACAAAGACATTTCGGGAGTTTCCTGACTAC GTAAAGCAAAACCTAGATCCTGCGAAACATAAGAAAGTCGCTATGTTTTGCACCGGTGGCATTCGCTGTGAAAAATCAAC CGCTTATTTAAAAGAGCAGGGCTTTGATGAGGTTTTTCACCTTGAAGGCGGGATCTTAAAGTATCTAGAAGAGGTCAAGC TTGAAGAAAGTTTATGGCAGGGTGAGTGTTTTGTATTTGATAACCGTGTCGCCGTCGACCATAACTTGGAAAAGGGCCAG TACGCTCAGTGTAATGCTTGCCGTATGCCGATCACCGCTGATGAAATGGCGCTGGATAGCTTTGTACAAGGGGTTAGTTG CCTCCATTGTATCGATAATATCAGCGAGAAACAGCGTCAACGCTTTATAGAGCGTGAGCGTCAAGTACAGCTGTCTAAGC TGCGTGGGGAAGCACATATCGGTAGTGATGTGAGCCAAGTGATACAGACACGCCGAGCCAAGAAAGACCGGCTTAAAAAG GCGCAGCACGACAAGAGTGCATAA
Upstream 100 bases:
>100_bases GCATTTTGTATGCTTGGGCAGGTTTTGCCTGCCAGCGTTAAGTTTATCAGCATTAATCGCACTGAAGATTGAGCTTCAGC TAGCCGAAAAAGGGAAGAAT
Downstream 100 bases:
>100_bases GATTTTGGATTAGCCAACCCAGACGATGGCTTAACTAGCCGACGATTAACATCATTAAAAGCAGCCTAAGGCTGCTTTTT TTATTTGTAAAAGGCACTTT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSKVVVCAMYKFVTLAEFEKLQSPLQKVMETSGVKGSLLLAQEGINGTVAGSQSAIDNLLAWLATQPGLDNIVYKLSFDD VMPFYRTKVKLKKEIVTMGVEGIDPKKVVGTYVKPKDWNQLISDPEVLLVDTRNDYEVQIGTFKDALDPKTKTFREFPDY VKQNLDPAKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVFHLEGGILKYLEEVKLEESLWQGECFVFDNRVAVDHNLEKGQ YAQCNACRMPITADEMALDSFVQGVSCLHCIDNISEKQRQRFIERERQVQLSKLRGEAHIGSDVSQVIQTRRAKKDRLKK AQHDKSA
Sequences:
>Translated_327_residues MSKVVVCAMYKFVTLAEFEKLQSPLQKVMETSGVKGSLLLAQEGINGTVAGSQSAIDNLLAWLATQPGLDNIVYKLSFDD VMPFYRTKVKLKKEIVTMGVEGIDPKKVVGTYVKPKDWNQLISDPEVLLVDTRNDYEVQIGTFKDALDPKTKTFREFPDY VKQNLDPAKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVFHLEGGILKYLEEVKLEESLWQGECFVFDNRVAVDHNLEKGQ YAQCNACRMPITADEMALDSFVQGVSCLHCIDNISEKQRQRFIERERQVQLSKLRGEAHIGSDVSQVIQTRRAKKDRLKK AQHDKSA >Mature_326_residues SKVVVCAMYKFVTLAEFEKLQSPLQKVMETSGVKGSLLLAQEGINGTVAGSQSAIDNLLAWLATQPGLDNIVYKLSFDDV MPFYRTKVKLKKEIVTMGVEGIDPKKVVGTYVKPKDWNQLISDPEVLLVDTRNDYEVQIGTFKDALDPKTKTFREFPDYV KQNLDPAKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVFHLEGGILKYLEEVKLEESLWQGECFVFDNRVAVDHNLEKGQY AQCNACRMPITADEMALDSFVQGVSCLHCIDNISEKQRQRFIERERQVQLSKLRGEAHIGSDVSQVIQTRRAKKDRLKKA QHDKSA
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=234, Percent_Identity=38.034188034188, Blast_Score=136, Evalue=2e-32, Organism=Escherichia coli, GI1787294, Length=251, Percent_Identity=33.0677290836653, Blast_Score=145, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2524_SHEPA (A8H5K7)
Other databases:
- EMBL: CP000851 - RefSeq: YP_001502379.1 - ProteinModelPortal: A8H5K7 - SMR: A8H5K7 - STRING: A8H5K7 - GeneID: 5662917 - GenomeReviews: CP000851_GR - KEGG: spl:Spea_2524 - NMPDR: fig|398579.3.peg.2180 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: QVYHLKG - ProtClustDB: CLSK2401674 - BioCyc: SPEA398579:SPEA_2524-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 37038; Mature: 36907
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 177-177
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVVVCAMYKFVTLAEFEKLQSPLQKVMETSGVKGSLLLAQEGINGTVAGSQSAIDNLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH AWLATQPGLDNIVYKLSFDDVMPFYRTKVKLKKEIVTMGVEGIDPKKVVGTYVKPKDWNQ HHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHH LISDPEVLLVDTRNDYEVQIGTFKDALDPKTKTFREFPDYVKQNLDPAKHKKVAMFCTGG HHCCCCEEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHHHHHCCCHHHHCEEEEEECCC IRCEKSTAYLKEQGFDEVFHLEGGILKYLEEVKLEESLWQGECFVFDNRVAVDHNLEKGQ EEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCC YAQCNACRMPITADEMALDSFVQGVSCLHCIDNISEKQRQRFIERERQVQLSKLRGEAHI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC GSDVSQVIQTRRAKKDRLKKAQHDKSA CHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKVVVCAMYKFVTLAEFEKLQSPLQKVMETSGVKGSLLLAQEGINGTVAGSQSAIDNLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH AWLATQPGLDNIVYKLSFDDVMPFYRTKVKLKKEIVTMGVEGIDPKKVVGTYVKPKDWNQ HHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHH LISDPEVLLVDTRNDYEVQIGTFKDALDPKTKTFREFPDYVKQNLDPAKHKKVAMFCTGG HHCCCCEEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHHHHHCCCHHHHCEEEEEECCC IRCEKSTAYLKEQGFDEVFHLEGGILKYLEEVKLEESLWQGECFVFDNRVAVDHNLEKGQ EEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCC YAQCNACRMPITADEMALDSFVQGVSCLHCIDNISEKQRQRFIERERQVQLSKLRGEAHI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC GSDVSQVIQTRRAKKDRLKKAQHDKSA CHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA