Click here to switch to the map view.

The map label for this gene is yegD [H]

Identifier: 157962344

GI number: 157962344

Start: 3074106

End: 3075473

Strand: Reverse

Name: yegD [H]

Synonym: Spea_2523

Alternate gene names: 157962344

Gene position: 3075473-3074106 (Counterclockwise)

Preceding gene: 157962345

Following gene: 157962343

Centisome position: 59.43

GC content: 48.98

Gene sequence:

>1368_bases
ATGTTTGTAGGTTTTGACTACGGTAGTGCAAACTGCGCTATTGGTGTGGTGGAAGGCGGTGATGTACGCTTGGTACCCTT
ATCTGGTGACTCTAACTATTTAAGTTCAACGCTGTATGCGATGGATAGAGAGTTAATTGCCGAGGCGGTATTAAATCAGT
TACCCCAAGAGCAAAAAGTGGAGTACGCCCGAGCGCGCGCCGCTCAGTTAAGTCGAGCGCACGCAGCGCGTCGCGATCTT
GATTTGCTGCCTAATGAGCAGGCGGTATTTGTGGGCGAGCAAGCTATTGAAGCCTATTTAGATATGCCTGACGAAGGGTT
TTATGTACGCTCGCCGAAATCTTTCCTTGGCGCTACAGGGCTAAGAGAGAGCCAAATCGCGCTATTTGAAGATATCGTCA
CCTTAATGATGATGCATATTAAGCAACAGGCTGAAAGCAACTTTTCACCGGCGCAGAAAATCACCCATGCGGTTATTGGC
CGCCCAGTAAACTTTCAGGGCATAGGTGGTGAGCAGAGCAATCAGCAGGCCGAGGCCATTTTATCACTTGCGGCTAGTCG
TGCTGGTTTTACCGAAGTCGATTTCTTATTTGAGCCTCTCGCGGCTGGTATGGACTATGAGGCCTCACTAGATGAAAACG
TTACTGTGCTGGTGGTGGATGTTGGCGGCGGTACCACAGACTGCTCTATGGTAAAAATGGGCCCAAATCATATCGATAAC
CGCGACCGTAGTGCCGATTTTTTAGGCCACAGTGGTCAGCGTATCGGTGGTAATGACTTAGATATCGCCTTGTCTATGGC
TTCATTTATGCCACATCTTGGTCTTGGTAGCTTGATGGTTAACCAATTGCCAGTGCCAAGCAAGCCGTTTTGGAACGCGG
TTGCAGTCAACGATATCAGTGCGCAGCGAGACTTTAGTGCCTTGGCCTCGAAGAAGTTAATCGAAGACTTAATCAAAGAT
GCCCAAAAGCCGGAGCTTGTTCAGCGTCTGCTTAAAGTTCAAAAAGAACAGCTAGGGTATAAATTGGTTCGTAGCGCCGA
GCAGAGTAAGATTGCCCTTTCTAGCGACGCATGTGTTGATACACCGCTGGAATATATTCACGCGGGATTACATGCTAGGG
TGAGCGAAGATGATTTCGAAAGTGCTATCACGATACCGCTATCAAAAGTCGAAGCCTTGATGCGAGAAGCCCTTGAGCAA
GCGGGTGTGATGCCAGACAGGATCTATGTGACGGGTGGTACGGCGAGAAGTCCGGCTATCTATAAACGCATTTCTGGTTT
GTTCCCTGAGATCCCAATCGTTGTCGGCGATCACTTCGGTAGTGTGACCGCAGGCTTAACTCGTTGGGCGCAAAGAGTGT
TTGCTTAA

Upstream 100 bases:

>100_bases
AGCAGCCTAAGGCTGCTTTTTTTATTTGTAAAAGGCACTTTTTACTCGCGTCTGACTGTGCTATTTTGCACGGCTTTTTT
ACGCTTTAAAGGATAAGGGA

Downstream 100 bases:

>100_bases
CGCTTTGTAATTTAAGTAATTGTGATTTAAATAATTTCGATTTAATAAATTTATCTTATTATTGGCTCAAACTCTTAAGG
AAATGGATATGACAAGCTTA

Product: putative chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MFVGFDYGSANCAIGVVEGGDVRLVPLSGDSNYLSSTLYAMDRELIAEAVLNQLPQEQKVEYARARAAQLSRAHAARRDL
DLLPNEQAVFVGEQAIEAYLDMPDEGFYVRSPKSFLGATGLRESQIALFEDIVTLMMMHIKQQAESNFSPAQKITHAVIG
RPVNFQGIGGEQSNQQAEAILSLAASRAGFTEVDFLFEPLAAGMDYEASLDENVTVLVVDVGGGTTDCSMVKMGPNHIDN
RDRSADFLGHSGQRIGGNDLDIALSMASFMPHLGLGSLMVNQLPVPSKPFWNAVAVNDISAQRDFSALASKKLIEDLIKD
AQKPELVQRLLKVQKEQLGYKLVRSAEQSKIALSSDACVDTPLEYIHAGLHARVSEDDFESAITIPLSKVEALMREALEQ
AGVMPDRIYVTGGTARSPAIYKRISGLFPEIPIVVGDHFGSVTAGLTRWAQRVFA

Sequences:

>Translated_455_residues
MFVGFDYGSANCAIGVVEGGDVRLVPLSGDSNYLSSTLYAMDRELIAEAVLNQLPQEQKVEYARARAAQLSRAHAARRDL
DLLPNEQAVFVGEQAIEAYLDMPDEGFYVRSPKSFLGATGLRESQIALFEDIVTLMMMHIKQQAESNFSPAQKITHAVIG
RPVNFQGIGGEQSNQQAEAILSLAASRAGFTEVDFLFEPLAAGMDYEASLDENVTVLVVDVGGGTTDCSMVKMGPNHIDN
RDRSADFLGHSGQRIGGNDLDIALSMASFMPHLGLGSLMVNQLPVPSKPFWNAVAVNDISAQRDFSALASKKLIEDLIKD
AQKPELVQRLLKVQKEQLGYKLVRSAEQSKIALSSDACVDTPLEYIHAGLHARVSEDDFESAITIPLSKVEALMREALEQ
AGVMPDRIYVTGGTARSPAIYKRISGLFPEIPIVVGDHFGSVTAGLTRWAQRVFA
>Mature_455_residues
MFVGFDYGSANCAIGVVEGGDVRLVPLSGDSNYLSSTLYAMDRELIAEAVLNQLPQEQKVEYARARAAQLSRAHAARRDL
DLLPNEQAVFVGEQAIEAYLDMPDEGFYVRSPKSFLGATGLRESQIALFEDIVTLMMMHIKQQAESNFSPAQKITHAVIG
RPVNFQGIGGEQSNQQAEAILSLAASRAGFTEVDFLFEPLAAGMDYEASLDENVTVLVVDVGGGTTDCSMVKMGPNHIDN
RDRSADFLGHSGQRIGGNDLDIALSMASFMPHLGLGSLMVNQLPVPSKPFWNAVAVNDISAQRDFSALASKKLIEDLIKD
AQKPELVQRLLKVQKEQLGYKLVRSAEQSKIALSSDACVDTPLEYIHAGLHARVSEDDFESAITIPLSKVEALMREALEQ
AGVMPDRIYVTGGTARSPAIYKRISGLFPEIPIVVGDHFGSVTAGLTRWAQRVFA

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=456, Percent_Identity=48.9035087719298, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 49434; Mature: 49434

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVGFDYGSANCAIGVVEGGDVRLVPLSGDSNYLSSTLYAMDRELIAEAVLNQLPQEQKV
CEEEECCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EYARARAAQLSRAHAARRDLDLLPNEQAVFVGEQAIEAYLDMPDEGFYVRSPKSFLGATG
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEECCHHHHCCCC
LRESQIALFEDIVTLMMMHIKQQAESNFSPAQKITHAVIGRPVNFQGIGGEQSNQQAEAI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LSLAASRAGFTEVDFLFEPLAAGMDYEASLDENVTVLVVDVGGGTTDCSMVKMGPNHIDN
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCC
RDRSADFLGHSGQRIGGNDLDIALSMASFMPHLGLGSLMVNQLPVPSKPFWNAVAVNDIS
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEECCCH
AQRDFSALASKKLIEDLIKDAQKPELVQRLLKVQKEQLGYKLVRSAEQSKIALSSDACVD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCEEECCCCCCC
TPLEYIHAGLHARVSEDDFESAITIPLSKVEALMREALEQAGVMPDRIYVTGGTARSPAI
CCHHHHHHHHHCCCCCHHHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
YKRISGLFPEIPIVVGDHFGSVTAGLTRWAQRVFA
HHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFVGFDYGSANCAIGVVEGGDVRLVPLSGDSNYLSSTLYAMDRELIAEAVLNQLPQEQKV
CEEEECCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EYARARAAQLSRAHAARRDLDLLPNEQAVFVGEQAIEAYLDMPDEGFYVRSPKSFLGATG
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEECCHHHHCCCC
LRESQIALFEDIVTLMMMHIKQQAESNFSPAQKITHAVIGRPVNFQGIGGEQSNQQAEAI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LSLAASRAGFTEVDFLFEPLAAGMDYEASLDENVTVLVVDVGGGTTDCSMVKMGPNHIDN
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCC
RDRSADFLGHSGQRIGGNDLDIALSMASFMPHLGLGSLMVNQLPVPSKPFWNAVAVNDIS
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEECCCH
AQRDFSALASKKLIEDLIKDAQKPELVQRLLKVQKEQLGYKLVRSAEQSKIALSSDACVD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCEEECCCCCCC
TPLEYIHAGLHARVSEDDFESAITIPLSKVEALMREALEQAGVMPDRIYVTGGTARSPAI
CCHHHHHHHHHCCCCCHHHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
YKRISGLFPEIPIVVGDHFGSVTAGLTRWAQRVFA
HHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]