Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962328
Identifier: 157962328
GI number: 157962328
Start: 3056014
End: 3056853
Strand: Direct
Name: 157962328
Synonym: Spea_2507
Alternate gene names: NA
Gene position: 3056014-3056853 (Clockwise)
Preceding gene: 157962326
Following gene: 157962329
Centisome position: 59.06
GC content: 42.26
Gene sequence:
>840_bases ATGACATTAGAAACAATCGATTATCGAGCCACGGATGCCGCTGAGAAATTTGTAGCTTCACTGCGTGAAACAGGCTTTGG CGTATTAACTAACCATCCTATTGACCAGAAATTGGTTGAGACCATTTATCAAGAGTGGCACGCGTTTTTTAATACCGAAG AAAAACGTGCATTCCTGTTTAAGCCTGAAACACAAGATGGCTTCTTCCCTGCTGAAATCTCAGAAACAGCAAAAGGGCAT AGCGTTAAAGACATCAAAGAATACTTTCACGTTTATCCTTGGGGACGTATTCCAGAATCTTTAAAAGACAATATTTTAAA GTATTACAATAATGCTAACTCATTAGCCTCTGAGTTATTGCAATGGGTTGAAGAGCATTCTCCAGCTGAAGTAAAACAGA AGTTTTCAATCGAACTACCAAAAATGATTCAAGATAGTCAGCGCACTTTGCTTCGTGTACTGCATTATCCACCAATGTCC GGCGATGAAGAGTTAGGCGCGATTCGAGCCGCAGCTCATGAAGATATCAACCTATTAACCGTACTTCCCGCTGCAAACGA GCCCGGACTTCAAGTACAGTTACAGGACGGAAACTGGATAGATGTCCCTAGCGACTTTGGCAATTTGATCATCAATATTG GTGATATGTTGCAAGAGGCCTCTGGCGGTTACTTTCCATCGACGAGTCACCGTGTCATTAACCCTAAAGGCATGGACAAG ACAAAGTCTCGCCTGTCGTTACCACTTTTCTTACACCCAAACCCTGAAGTCAAATTGTCAGATAAATACACTGCCGACAG CTACCTGATGGAACGATTAAGAGAATTAGGGGTAATTTAG
Upstream 100 bases:
>100_bases TTGTATAAACAATCAGAAGCGTGATCTAGCTCACTCACGTTTGATTCAGCAGTTTCAGCTCGTTAAACTTACCGCGGGTT TCATAATAAGAAGAATCAAG
Downstream 100 bases:
>100_bases CCTCATTCACACTCAATAAGAGCTCAATAAGCGCCTTAGGGCGCTTTTTGTTTGTTAAACTTAAGCAGAACAAGGTAAAA TCCCCTTAATTTAGTAATTT
Product: 2OG-Fe(II) oxygenase
Products: isopenicillin N; H2O
Alternate protein names: Oxidoreductase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Isopenicillin N Synthase; Iron/Ascorbate Family Oxidoreductase; 2OG-Fe(II) Oxygenase Superfamily Protein; Flavonol Synthase/Dioxygenase; Iron/Ascorbate Oxidoreductase Family Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2og-Fe(Ii) Oxygenase; Oxidoreductase Iron/Ascorbate Family Protein; Iron/Ascorbate Oxidoreductase; 1-Aminocyclopropane-1-Carboxylate Oxidase; Oxygenase; Isopenicillin N Synthase And Related Dioxygenases; Oxidoreductase 2og-Fe(Ii) Oxygenase Family; Iron/Ascorbate-Dependent Oxidoreductase Family Protein; Isopenicillin N Synthetase; Iron/Ascorbate-Dependent Oxidoreductase; Oxidoreductase Iron/Ascorbate Family; 2OG-Fe(II) Oxygenase Family Protein; Fe-Containing Oxidoreductase; Isopenicillin-N Synthase; 2-Oxobutyrate Oxidase; Flavonol Synthase/Flavanone 3-Hydroxylase; 2-Oxoglutarate And Fe(Ii)-Dependent Oxygenase; Dioxygenase; Oxygenase/Oxidoreductase
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTLETIDYRATDAAEKFVASLRETGFGVLTNHPIDQKLVETIYQEWHAFFNTEEKRAFLFKPETQDGFFPAEISETAKGH SVKDIKEYFHVYPWGRIPESLKDNILKYYNNANSLASELLQWVEEHSPAEVKQKFSIELPKMIQDSQRTLLRVLHYPPMS GDEELGAIRAAAHEDINLLTVLPAANEPGLQVQLQDGNWIDVPSDFGNLIINIGDMLQEASGGYFPSTSHRVINPKGMDK TKSRLSLPLFLHPNPEVKLSDKYTADSYLMERLRELGVI
Sequences:
>Translated_279_residues MTLETIDYRATDAAEKFVASLRETGFGVLTNHPIDQKLVETIYQEWHAFFNTEEKRAFLFKPETQDGFFPAEISETAKGH SVKDIKEYFHVYPWGRIPESLKDNILKYYNNANSLASELLQWVEEHSPAEVKQKFSIELPKMIQDSQRTLLRVLHYPPMS GDEELGAIRAAAHEDINLLTVLPAANEPGLQVQLQDGNWIDVPSDFGNLIINIGDMLQEASGGYFPSTSHRVINPKGMDK TKSRLSLPLFLHPNPEVKLSDKYTADSYLMERLRELGVI >Mature_278_residues TLETIDYRATDAAEKFVASLRETGFGVLTNHPIDQKLVETIYQEWHAFFNTEEKRAFLFKPETQDGFFPAEISETAKGHS VKDIKEYFHVYPWGRIPESLKDNILKYYNNANSLASELLQWVEEHSPAEVKQKFSIELPKMIQDSQRTLLRVLHYPPMSG DEELGAIRAAAHEDINLLTVLPAANEPGLQVQLQDGNWIDVPSDFGNLIINIGDMLQEASGGYFPSTSHRVINPKGMDKT KSRLSLPLFLHPNPEVKLSDKYTADSYLMERLRELGVI
Specific function: Unknown
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI85816264, Length=264, Percent_Identity=25, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28572124, Length=265, Percent_Identity=24.9056603773585, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.21.3.1
Molecular weight: Translated: 31735; Mature: 31604
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETIDYRATDAAEKFVASLRETGFGVLTNHPIDQKLVETIYQEWHAFFNTEEKRAFLF CCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEE KPETQDGFFPAEISETAKGHSVKDIKEYFHVYPWGRIPESLKDNILKYYNNANSLASELL CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH QWVEEHSPAEVKQKFSIELPKMIQDSQRTLLRVLHYPPMSGDEELGAIRAAAHEDINLLT HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE VLPAANEPGLQVQLQDGNWIDVPSDFGNLIINIGDMLQEASGGYFPSTSHRVINPKGMDK EEECCCCCCCEEEECCCCEEECCHHHHHHEEHHHHHHHHHCCCCCCCCCCEEECCCCCCH TKSRLSLPLFLHPNPEVKLSDKYTADSYLMERLRELGVI HHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TLETIDYRATDAAEKFVASLRETGFGVLTNHPIDQKLVETIYQEWHAFFNTEEKRAFLF CCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEE KPETQDGFFPAEISETAKGHSVKDIKEYFHVYPWGRIPESLKDNILKYYNNANSLASELL CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH QWVEEHSPAEVKQKFSIELPKMIQDSQRTLLRVLHYPPMSGDEELGAIRAAAHEDINLLT HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE VLPAANEPGLQVQLQDGNWIDVPSDFGNLIINIGDMLQEASGGYFPSTSHRVINPKGMDK EEECCCCCCCEEEECCCCEEECCHHHHHHEEHHHHHHHHHCCCCCCCCCCEEECCCCCCH TKSRLSLPLFLHPNPEVKLSDKYTADSYLMERLRELGVI HHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine; O2
Specific reaction: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O2 = isopenicillin N + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA