Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yitL [H]
Identifier: 157962302
GI number: 157962302
Start: 3027546
End: 3028379
Strand: Direct
Name: yitL [H]
Synonym: Spea_2481
Alternate gene names: 157962302
Gene position: 3027546-3028379 (Clockwise)
Preceding gene: 157962293
Following gene: 157962303
Centisome position: 58.51
GC content: 40.53
Gene sequence:
>834_bases ATGATCCAGATAGGCAAAACCTGTAAGTTAGAAGTCGTCAAACAAGTTGATTTTGGTGTCTATTTAGACGCTAAAGAGAT GGGCCAGGTACTTCTTCCTCGCAAAGCTGTACCAAAGGATTGCCATGTTGGAGATATGGTCAATGTGTTTCTCTATTTAG ACTCAGAAGATATGATCATTGCAACGACTAAGCGTCCTTATGCACAAGTCGGTCAATTTGCTTATCTAGAAGCAAAAGAA AATGGCCCATATGGCGCCTTTTTGGATTGGGGCTTAGAAAAAGACCTGTTATTACCTTTTGGTGAGCAACACAGAGAAAT CGAGGTGGGTAAGTCCTACTTGGTTTACATCTATACCAGCCATGTCGACGACCGTATCGTTGCATCTGCTAAAGTCGATA AATTCCTCGACTTATCTGAACCTAAATTCCGCAATGATGAAGAAGTTAATCTAATCATTGGTGGCTCAACCGATCTTGGT TATAAAGCCATCATAAACAATACCCACTGGGGCGTATTGTACAAAAATGAAGTTTATACGCGTTTAAGTTTTGGCCAAAA GCTGAAAGGCTTTATTAAGCGTATGAGAAGCGACGGTAAAATCGATCTGATTTTACAAAAAGGCGCGAAAGAGGAGCTTG ATAAGCACTCTGTCACTATCATGATTAAACTAAATCAAGCTGGCGGTTTCCTACCACTCAATGATAAGACCGATGCTGAT GTGATCTATTCACAACTGTCTATGAGTAAGAAAGCCTTTAAAAAGAGTATCGGTGGCCTTTATAAGAGTAAGCAGATCAC TATTTCACCAGATGGGATCCGTCTAGCAGACTAA
Upstream 100 bases:
>100_bases CTTTAGGGCATTAGTTTCAACAGGCTAAAGCATATTGGAACGTTTTCCACTATAATCCCAGCTGAATTTAATCGTTACTG TTTTTAAAGTAGAGAACATC
Downstream 100 bases:
>100_bases TCTATAGGCAGAAGTTGCTTACAAACCCAGCAACTGAAGAGTTTAGATAGTTAAGCGCACTAAACCACCTTTGCATTAAA GCATGGCTCTGTTATAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMIIATTKRPYAQVGQFAYLEAKE NGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTSHVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLG YKAIINNTHWGVLYKNEVYTRLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD
Sequences:
>Translated_277_residues MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMIIATTKRPYAQVGQFAYLEAKE NGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTSHVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLG YKAIINNTHWGVLYKNEVYTRLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD >Mature_277_residues MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMIIATTKRPYAQVGQFAYLEAKE NGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTSHVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLG YKAIINNTHWGVLYKNEVYTRLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31211; Mature: 31211
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMII CCCCCCCCEEEEEEECCCEEEECHHHHCHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEE ATTKRPYAQVGQFAYLEAKENGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTS EECCCCHHHHCCEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCEEECCCEEEEEEEEC HVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLGYKAIINNTHWGVLYKNEVYT CCCCCEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCEEE RLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD EHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCEEEEEEEECCCCCEEECCCCCCHH VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECC >Mature Secondary Structure MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMII CCCCCCCCEEEEEEECCCEEEECHHHHCHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEE ATTKRPYAQVGQFAYLEAKENGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTS EECCCCHHHHCCEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCEEECCCEEEEEEEEC HVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLGYKAIINNTHWGVLYKNEVYT CCCCCEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCEEE RLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD EHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCEEEEEEEECCCCCEEECCCCCCHH VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]