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The map label for this gene is cmoB [H]

Identifier: 157962190

GI number: 157962190

Start: 2889242

End: 2890234

Strand: Direct

Name: cmoB [H]

Synonym: Spea_2369

Alternate gene names: 157962190

Gene position: 2889242-2890234 (Clockwise)

Preceding gene: 157962189

Following gene: 157962191

Centisome position: 55.84

GC content: 45.12

Gene sequence:

>993_bases
GTGATTAGCTTTAGCTCGTTTTACAAACAAATTTCAGACTCCAGCCTACAACACTGGTTAGAGACGCTTCCATCCATTCT
TGGTCAGTGGCAACGTGATCACAAACATGGCTCCCTACCAAAGTGGGAGAAAGTGCTCAATAAACTGCATTACCCTGACG
CCGACATCATAGATTTCAAAACCAGTGTAAAAATTGGTTCTGGTGAACAATTAAGTGATGGCGAAAGAGAGAAGCTTGAG
AATCTTTTAGGGATTTTTAAACCTTGGCGTAAAGGCCCCTACTCACTACACGGCGTAGAAATTGATACCGAATGGCGATC
AGACTGGAAGTGGGAGCGTGTCGTGCCACATATCTCCCCCCTAGCCAATCGCACCGTGTTAGATGTTGGTTGTGGTAGTG
GTTATCATATGTGGCGTATGTTAGGCGAAGGTGCTAAGCACGTAGTCGGTATCGATCCATCACCTCTGTTTATGTGCCAG
TTCGAAGCCGTTAAACGTTTAGCCGGTAATGAACATCCCGTTCATTTCCTACCGCTTGGCATCGAAGAGTTACCACCGCT
AGATGCCTTCGACACCGTTTTTTCGATGGGGGTTTTATATCACCGCCGCTCGCCTATTGATCACATTTATCAGTTAAGAG
ATCAGCTCCGCACTGGTGGTGAACTAGTACTAGAAACACTGGTGATTGATGGCGATGAAAATACCGTACTCGTGCCAAAA
GACAGATATGGCAAGATGAATAACGTGTGGTTTTTGCCCTCTGTTGATGCGCTGATGCTTTGGCTAAAGAAGTGTGATTT
CACCGACATACGTTGTGTCGATGTTGATGTGACCTCACTTGCAGAGCAAAGAAGCACTCAATGGATGCCAAATGAGTCAT
TAGTAGACTATTTAGACCCTAATGATGTTAGCCTTACGGTTGAAGGTTATCCAGCGCCTAAAAGGGCGACAATCATTGCC
ACCAAGAATCAACCTAATAAAGATTTGATCTAG

Upstream 100 bases:

>100_bases
ATACGCTCGTCGAGCACGAAAATAGGATCAGAGCACAAGGGTTTAGCCAGTTCAGCGTTTGGTTCCAATGTTTTAATTTT
GCATCAATGGTGGCAATTAA

Downstream 100 bases:

>100_bases
CCAAAATAGTAATGGGAAGCACTATGTTCAAGCAGATAATTTGTATCGCCGCGATTTCAGCCCTGATATCGGGTTGCGCA
ACGACGAAAGAAAACAACGC

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MISFSSFYKQISDSSLQHWLETLPSILGQWQRDHKHGSLPKWEKVLNKLHYPDADIIDFKTSVKIGSGEQLSDGEREKLE
NLLGIFKPWRKGPYSLHGVEIDTEWRSDWKWERVVPHISPLANRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQ
FEAVKRLAGNEHPVHFLPLGIEELPPLDAFDTVFSMGVLYHRRSPIDHIYQLRDQLRTGGELVLETLVIDGDENTVLVPK
DRYGKMNNVWFLPSVDALMLWLKKCDFTDIRCVDVDVTSLAEQRSTQWMPNESLVDYLDPNDVSLTVEGYPAPKRATIIA
TKNQPNKDLI

Sequences:

>Translated_330_residues
MISFSSFYKQISDSSLQHWLETLPSILGQWQRDHKHGSLPKWEKVLNKLHYPDADIIDFKTSVKIGSGEQLSDGEREKLE
NLLGIFKPWRKGPYSLHGVEIDTEWRSDWKWERVVPHISPLANRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQ
FEAVKRLAGNEHPVHFLPLGIEELPPLDAFDTVFSMGVLYHRRSPIDHIYQLRDQLRTGGELVLETLVIDGDENTVLVPK
DRYGKMNNVWFLPSVDALMLWLKKCDFTDIRCVDVDVTSLAEQRSTQWMPNESLVDYLDPNDVSLTVEGYPAPKRATIIA
TKNQPNKDLI
>Mature_330_residues
MISFSSFYKQISDSSLQHWLETLPSILGQWQRDHKHGSLPKWEKVLNKLHYPDADIIDFKTSVKIGSGEQLSDGEREKLE
NLLGIFKPWRKGPYSLHGVEIDTEWRSDWKWERVVPHISPLANRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQ
FEAVKRLAGNEHPVHFLPLGIEELPPLDAFDTVFSMGVLYHRRSPIDHIYQLRDQLRTGGELVLETLVIDGDENTVLVPK
DRYGKMNNVWFLPSVDALMLWLKKCDFTDIRCVDVDVTSLAEQRSTQWMPNESLVDYLDPNDVSLTVEGYPAPKRATIIA
TKNQPNKDLI

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=61.4906832298137, Blast_Score=417, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 37761; Mature: 37761

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFSSFYKQISDSSLQHWLETLPSILGQWQRDHKHGSLPKWEKVLNKLHYPDADIIDFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEE
TSVKIGSGEQLSDGEREKLENLLGIFKPWRKGPYSLHGVEIDTEWRSDWKWERVVPHISP
EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHCCCHHH
LANRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQFEAVKRLAGNEHPVHFLPLG
HCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEECC
IEELPPLDAFDTVFSMGVLYHRRSPIDHIYQLRDQLRTGGELVLETLVIDGDENTVLVPK
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHEEEEEEEEECCCCEEEEEC
DRYGKMNNVWFLPSVDALMLWLKKCDFTDIRCVDVDVTSLAEQRSTQWMPNESLVDYLDP
HHCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCHHHCCCC
NDVSLTVEGYPAPKRATIIATKNQPNKDLI
CCEEEEEECCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MISFSSFYKQISDSSLQHWLETLPSILGQWQRDHKHGSLPKWEKVLNKLHYPDADIIDFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEE
TSVKIGSGEQLSDGEREKLENLLGIFKPWRKGPYSLHGVEIDTEWRSDWKWERVVPHISP
EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHCCCHHH
LANRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQFEAVKRLAGNEHPVHFLPLG
HCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEECC
IEELPPLDAFDTVFSMGVLYHRRSPIDHIYQLRDQLRTGGELVLETLVIDGDENTVLVPK
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHEEEEEEEEECCCCEEEEEC
DRYGKMNNVWFLPSVDALMLWLKKCDFTDIRCVDVDVTSLAEQRSTQWMPNESLVDYLDP
HHCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCHHHCCCC
NDVSLTVEGYPAPKRATIIATKNQPNKDLI
CCEEEEEECCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA