Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is pykA [H]
Identifier: 157962158
GI number: 157962158
Start: 2846735
End: 2848171
Strand: Direct
Name: pykA [H]
Synonym: Spea_2337
Alternate gene names: 157962158
Gene position: 2846735-2848171 (Clockwise)
Preceding gene: 157962157
Following gene: 157962161
Centisome position: 55.01
GC content: 47.46
Gene sequence:
>1437_bases ATGTTCCGCAGAACCAAAATTGTAACAACTTTGGGTCCAGCCACAGACCGTGATGACAACTTACGCCGCATTATTGCTGC CGGTGCTAACGTTGTTCGCTTAAACTTCTCTCACGGTGCACCAGAAGATCATAAGAAACGCGCAGACGATACACGAGCGA TTGCAAAAGAGCTCGGCGTTCATGTTGCCGTTTTAGGCGATCTACAGGGCCCTAAAATCCGAATCTCAACTTTCAAAGAC AACAGAAAGGTTATGTTAGTGCTTGGTCAAGCCTATACCCTTGATGCCGATCTAGCGAAAGGTGAAGGTGATGAAAACCA AGTCGGTATCGATTATAAAGAGTTACCACAGGACGTTAGTCTTGGTGATATCTTAATGCTCGATGACGGCCGCGTTCAAC TACGCGTTGAAAGCGTCGAAGGTAACAAGGTTCATACCATAGTGACGGTTGCCGGTCCTTTATCAAACAATAAAGGTATC AACAAGCAAGGCGGTGGCCTTTCTGCGGCGGCTCTAACAGAAAAAGACAAGCAAGACATCATCACCGCAGCTGAGATTAA AGTTGATTATCTCGCCGTCTCTTTCCCAAGAAGTGGTGCAGATCTTAACTACGCTCGTGATTTAGCACGTCAAGCCGGTA GTAATGCGTTAATCGTCTCTAAAGTTGAGCGCGCAGAAGCCGTTGCAACTGACGAAGCGATGGACGATGTCATCATGGCG TCTGATGCCGTTATGGTTGCTCGTGGTGATCTCGGTGTTGAAATTGGTGATCCTGCTCTTGTTGCAGTTCAAAAGAGACT GATTAGCCGTTCACGTCAATTGAATAAGCCTGTTATTACAGCAACTCAAATGATGGAATCGATGATCTCTAGCCCAATGC CAACTCGTGCAGAAGTGATGGACGTAGCAAACGCGGTTCTAGATGGTACCGATGCGGTAATGCTAAGCGCCGAAACTGCT GCCGGTGACTTCCCAGAAGAAACCGTTAAAGCCATGGCTGAAGTCTGTTTAGGTGCGGAGTCTCATCCTAGTGTTCAAGT TTCTAAGCACAGATTGGATCAGCAGTTCACCACCATCGAAGAGACGATTGCATTATCGACTATGTATGCAGCAAACCACC TAGAAGGTATCAAGGCCATTATCGCCCTTACCGAATCTGGTGCAACGCCGCAGATGATGTCTCGCATCAGCTCTGCTCTG CCAATTTTTGCCTTGTCACGTCATGAGTCGACTTTGGCTAAGATGGCGCTTTACCGCGGTGTTCAGCCTGTGTATTTTGA TTCGACTGCACATGCTCCAGAAGCGGTAGCTCAAAAAGCACTAGAGACGCTTTCTCAAGCTGGTTACCTTGTAAAAGGCG ACATGGCGATGATGACTAAGGGTGATGCAATGGAAACCGTTGGTGGCACTAACACCAGCAAGGTTGTTGTTGTTTAA
Upstream 100 bases:
>100_bases AAAACTTGAGTTAGATCATTTTGTTCGTAAATTTACTACAAGTATGGGTGTTGTCTGTTAATATAGGGTCAGAATTATTT AAAACTTAACGGAGTATCTC
Downstream 100 bases:
>100_bases ACCATACTCCCCCTTAAATCATTAGGGATTTAGTCAATAAAAAAGGTACGCATTGCGTACCTTTTTTTATACTCAATAAA CGGGTTAAAGTTTATCGAAC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGAPEDHKKRADDTRAIAKELGVHVAVLGDLQGPKIRISTFKD NRKVMLVLGQAYTLDADLAKGEGDENQVGIDYKELPQDVSLGDILMLDDGRVQLRVESVEGNKVHTIVTVAGPLSNNKGI NKQGGGLSAAALTEKDKQDIITAAEIKVDYLAVSFPRSGADLNYARDLARQAGSNALIVSKVERAEAVATDEAMDDVIMA SDAVMVARGDLGVEIGDPALVAVQKRLISRSRQLNKPVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMAEVCLGAESHPSVQVSKHRLDQQFTTIEETIALSTMYAANHLEGIKAIIALTESGATPQMMSRISSAL PIFALSRHESTLAKMALYRGVQPVYFDSTAHAPEAVAQKALETLSQAGYLVKGDMAMMTKGDAMETVGGTNTSKVVVV
Sequences:
>Translated_478_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGAPEDHKKRADDTRAIAKELGVHVAVLGDLQGPKIRISTFKD NRKVMLVLGQAYTLDADLAKGEGDENQVGIDYKELPQDVSLGDILMLDDGRVQLRVESVEGNKVHTIVTVAGPLSNNKGI NKQGGGLSAAALTEKDKQDIITAAEIKVDYLAVSFPRSGADLNYARDLARQAGSNALIVSKVERAEAVATDEAMDDVIMA SDAVMVARGDLGVEIGDPALVAVQKRLISRSRQLNKPVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMAEVCLGAESHPSVQVSKHRLDQQFTTIEETIALSTMYAANHLEGIKAIIALTESGATPQMMSRISSAL PIFALSRHESTLAKMALYRGVQPVYFDSTAHAPEAVAQKALETLSQAGYLVKGDMAMMTKGDAMETVGGTNTSKVVVV >Mature_478_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGAPEDHKKRADDTRAIAKELGVHVAVLGDLQGPKIRISTFKD NRKVMLVLGQAYTLDADLAKGEGDENQVGIDYKELPQDVSLGDILMLDDGRVQLRVESVEGNKVHTIVTVAGPLSNNKGI NKQGGGLSAAALTEKDKQDIITAAEIKVDYLAVSFPRSGADLNYARDLARQAGSNALIVSKVERAEAVATDEAMDDVIMA SDAVMVARGDLGVEIGDPALVAVQKRLISRSRQLNKPVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMAEVCLGAESHPSVQVSKHRLDQQFTTIEETIALSTMYAANHLEGIKAIIALTESGATPQMMSRISSAL PIFALSRHESTLAKMALYRGVQPVYFDSTAHAPEAVAQKALETLSQAGYLVKGDMAMMTKGDAMETVGGTNTSKVVVV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=495, Percent_Identity=35.959595959596, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI33286420, Length=495, Percent_Identity=35.959595959596, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=35.959595959596, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=33.8709677419355, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI32967597, Length=496, Percent_Identity=33.8709677419355, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=35.2941176470588, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=35.2941176470588, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=33.1914893617021, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=33.1914893617021, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=32.7102803738318, Blast_Score=103, Evalue=5e-22, Organism=Escherichia coli, GI1788160, Length=477, Percent_Identity=71.2788259958071, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=480, Percent_Identity=37.5, Blast_Score=285, Evalue=5e-78, Organism=Caenorhabditis elegans, GI17544584, Length=487, Percent_Identity=36.1396303901437, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17506831, Length=493, Percent_Identity=34.8884381338742, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71984413, Length=493, Percent_Identity=34.8884381338742, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17506829, Length=493, Percent_Identity=34.8884381338742, Blast_Score=231, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71984406, Length=493, Percent_Identity=34.8884381338742, Blast_Score=231, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6319279, Length=474, Percent_Identity=36.0759493670886, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324923, Length=433, Percent_Identity=34.4110854503464, Blast_Score=220, Evalue=3e-58, Organism=Drosophila melanogaster, GI24648964, Length=501, Percent_Identity=33.9321357285429, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI28571814, Length=501, Percent_Identity=33.9321357285429, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24648966, Length=449, Percent_Identity=34.9665924276169, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24581235, Length=496, Percent_Identity=30.8467741935484, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24646914, Length=271, Percent_Identity=37.2693726937269, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51069; Mature: 51069
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGAPEDHKKRADDTRAIAKELGV CCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHCE HVAVLGDLQGPKIRISTFKDNRKVMLVLGQAYTLDADLAKGEGDENQVGIDYKELPQDVS EEEEEECCCCCEEEEEEECCCCEEEEEEECEEEECCHHHCCCCCCCCCCCCHHHCCCCCC LGDILMLDDGRVQLRVESVEGNKVHTIVTVAGPLSNNKGINKQGGGLSAAALTEKDKQDI CCCEEEEECCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEHHHCCCCHHHC ITAAEIKVDYLAVSFPRSGADLNYARDLARQAGSNALIVSKVERAEAVATDEAMDDVIMA EEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHC SDAVMVARGDLGVEIGDPALVAVQKRLISRSRQLNKPVITATQMMESMISSPMPTRAEVM CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHH DVANAVLDGTDAVMLSAETAAGDFPEETVKAMAEVCLGAESHPSVQVSKHRLDQQFTTIE HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHH ETIALSTMYAANHLEGIKAIIALTESGATPQMMSRISSALPIFALSRHESTLAKMALYRG HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHC VQPVYFDSTAHAPEAVAQKALETLSQAGYLVKGDMAMMTKGDAMETVGGTNTSKVVVV CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHCCCCCCCEEEEC >Mature Secondary Structure MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGAPEDHKKRADDTRAIAKELGV CCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHCE HVAVLGDLQGPKIRISTFKDNRKVMLVLGQAYTLDADLAKGEGDENQVGIDYKELPQDVS EEEEEECCCCCEEEEEEECCCCEEEEEEECEEEECCHHHCCCCCCCCCCCCHHHCCCCCC LGDILMLDDGRVQLRVESVEGNKVHTIVTVAGPLSNNKGINKQGGGLSAAALTEKDKQDI CCCEEEEECCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEHHHCCCCHHHC ITAAEIKVDYLAVSFPRSGADLNYARDLARQAGSNALIVSKVERAEAVATDEAMDDVIMA EEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHC SDAVMVARGDLGVEIGDPALVAVQKRLISRSRQLNKPVITATQMMESMISSPMPTRAEVM CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHH DVANAVLDGTDAVMLSAETAAGDFPEETVKAMAEVCLGAESHPSVQVSKHRLDQQFTTIE HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHH ETIALSTMYAANHLEGIKAIIALTESGATPQMMSRISSALPIFALSRHESTLAKMALYRG HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHC VQPVYFDSTAHAPEAVAQKALETLSQAGYLVKGDMAMMTKGDAMETVGGTNTSKVVVV CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]