The gene/protein map for NC_009901 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961683

Identifier: 157961683

GI number: 157961683

Start: 2263272

End: 2263901

Strand: Direct

Name: 157961683

Synonym: Spea_1859

Alternate gene names: NA

Gene position: 2263272-2263901 (Clockwise)

Preceding gene: 157961680

Following gene: 157961684

Centisome position: 43.74

GC content: 52.54

Gene sequence:

>630_bases
ATGGCGAAACAAATGGCGTACAATGAGGAGACACAGAAGGCGGTTCGACGGGTTTGGGATGAGTTCAAGAGTGAGACAGG
GACGAGCCAAGCAAAAGCGGCCAAAGCCCTCGGCATTAACCAGTCGGCGTTAAGTCAGTACCTAAGAGGGGAGATCCCCC
TTAATACAGACTTCTTGGCTAAGTTTGCAAAACTAACAAAGTCCGACTTAGACTCCTTGGGAATAACTCCCGCCACCGTA
GGGGCGATGCCGCTAGAACTAAGGTACACGCTGTCAGGGCGTAGGCTACGTGACACCAGTGCGCTGGTACCCTCGCCGAC
CTCATTTGAGGGCTGTTTCGGGATAGTAGTCGATTACGATGACTTCGCCCTACCAAGAGACAGCATTATGATTGTCGATG
AGACAACAACAATCAAAGAATATGACTCGGTTATCCTAGTCTCACGTGATGACCGAATGATCAACGGCACCATCAGGTAC
ACCCCAGATGGATGGGAGGTTCTTGAGCCTCACGCAAGAGGGGCGCGGCGCTTCGTTGTGAGAGGAGACGACACTATTTA
CAGATTAGGGGGCGCGTTCCTACCCGAAAGGCATGGGCGGACTTTCGAGCAAAAACCTGCACGGGGTTAG

Upstream 100 bases:

>100_bases
AAGCAAAATATTACTGACCTGTACATGAGTACATATAGCTGCGCATTAATTTGACACATAAACAGTGTCCCTGTTACAGT
GAGTAATAGAGTTAATAATC

Downstream 100 bases:

>100_bases
TACTCCGTTTTTTGGGTTAGCGTTTAAGTGGTAATCCTGCTAGTGGTGCTAGTCCTTATACTATCATCTCTGTTGCCTAT
CAAAACGAAATATGAATAAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAKQMAYNEETQKAVRRVWDEFKSETGTSQAKAAKALGINQSALSQYLRGEIPLNTDFLAKFAKLTKSDLDSLGITPATV
GAMPLELRYTLSGRRLRDTSALVPSPTSFEGCFGIVVDYDDFALPRDSIMIVDETTTIKEYDSVILVSRDDRMINGTIRY
TPDGWEVLEPHARGARRFVVRGDDTIYRLGGAFLPERHGRTFEQKPARG

Sequences:

>Translated_209_residues
MAKQMAYNEETQKAVRRVWDEFKSETGTSQAKAAKALGINQSALSQYLRGEIPLNTDFLAKFAKLTKSDLDSLGITPATV
GAMPLELRYTLSGRRLRDTSALVPSPTSFEGCFGIVVDYDDFALPRDSIMIVDETTTIKEYDSVILVSRDDRMINGTIRY
TPDGWEVLEPHARGARRFVVRGDDTIYRLGGAFLPERHGRTFEQKPARG
>Mature_208_residues
AKQMAYNEETQKAVRRVWDEFKSETGTSQAKAAKALGINQSALSQYLRGEIPLNTDFLAKFAKLTKSDLDSLGITPATVG
AMPLELRYTLSGRRLRDTSALVPSPTSFEGCFGIVVDYDDFALPRDSIMIVDETTTIKEYDSVILVSRDDRMINGTIRYT
PDGWEVLEPHARGARRFVVRGDDTIYRLGGAFLPERHGRTFEQKPARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23371; Mature: 23240

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQMAYNEETQKAVRRVWDEFKSETGTSQAKAAKALGINQSALSQYLRGEIPLNTDFLA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
KFAKLTKSDLDSLGITPATVGAMPLELRYTLSGRRLRDTSALVPSPTSFEGCFGIVVDYD
HHHHHHHHHHHHCCCCCHHHCCCEEEEEEEECCCEECCCCCCCCCCCCCCCEEEEEEECC
DFALPRDSIMIVDETTTIKEYDSVILVSRDDRMINGTIRYTPDGWEVLEPHARGARRFVV
CCCCCCCCEEEEECCCCHHCCCCEEEEECCCEEEECEEEECCCCHHEECCCCCCCEEEEE
RGDDTIYRLGGAFLPERHGRTFEQKPARG
ECCCEEEECCCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
AKQMAYNEETQKAVRRVWDEFKSETGTSQAKAAKALGINQSALSQYLRGEIPLNTDFLA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
KFAKLTKSDLDSLGITPATVGAMPLELRYTLSGRRLRDTSALVPSPTSFEGCFGIVVDYD
HHHHHHHHHHHHCCCCCHHHCCCEEEEEEEECCCEECCCCCCCCCCCCCCCEEEEEEECC
DFALPRDSIMIVDETTTIKEYDSVILVSRDDRMINGTIRYTPDGWEVLEPHARGARRFVV
CCCCCCCCEEEEECCCCHHCCCCEEEEECCCEEEECEEEECCCCHHEECCCCCCCEEEEE
RGDDTIYRLGGAFLPERHGRTFEQKPARG
ECCCEEEECCCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA