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The map label for this gene is ybjY [C]

Identifier: 157961663

GI number: 157961663

Start: 2236897

End: 2238063

Strand: Direct

Name: ybjY [C]

Synonym: Spea_1839

Alternate gene names: 157961663

Gene position: 2236897-2238063 (Clockwise)

Preceding gene: 157961662

Following gene: 157961664

Centisome position: 43.23

GC content: 47.04

Gene sequence:

>1167_bases
ATGAAGTTGACCCTAATTAGTGGATTCGTGTTTGGCGCACTATTAACCGGTTGCTCAGACACGGTTACCACCCAAGTCGA
GTCAGGTATTCTAGAACAGCAGATTGAAGTAACAGGAGAGTTGGTTTCGGCTAATACCGTGAACCTAAAGCCGCCAGCTC
TGCGCCGCGTCTGGCAATATCAAGTGAAGATGTTGGCTCCAGAAGGCAGTGAGGTTAACAAGGGGGATAGAGTCGCGCAG
CTAGATACCTCTAACTTGAGCCAAAGGCTATCGGTCAAGGCGGCTGAATTAGAGACAACGATTCAGGATATCGAAACCTC
GAAGCTTAGAAATGCTAAGAAACTTGAGGAGCTCAAACTTGAGCTGGCCGAAGCTAAGATGAATCAAGAGAAGAGTCAGA
TGAAAGTCGACATTTCAGATGAAACCGTTTCGGCTATCGATGAACAGAAATACTTAAGAGATGCCGTTATCGCCAAAGAT
CGCGTCAAACTCATTAATCAAAAAATTGAGCTTGAGCTCAAAGGTGCCGAACAGCGAATGAAAATGCTGGCAGGCGACCA
ACAAAAGTTTGCCGCCGAAGTGTCCACTCTAGAGAAAGGGATTAAGTCGATGACACTTATTGCGCCCCGAGCTGGCATGG
TGGTTTACGGCAACGACCAGCAGGGCAACAAGGTGGCCGAAGGCCAAAATATCTTTGTTGGTGACTCTGTATTAAGTATT
CCGGATCTGCAACATATGCAGGTCAATATGACCATTCCTGAGGTAGAAGCTGGGCGGGTTAAGATTGGTCAAAAACTCAA
AATTCGTCTCGATGCTAACCCAGAGAAGAGCTTTAATGGTGAAATCACCGAACTTGGCGCCGTATTTAGGGTGAAGAATC
AAGATGTGCCCTTGGTGATTTTTGATGCTGTCGCTAGCATTAGCGAGCCTGATACCGAGCTGATGCGCCCAGGGATGACG
GCGAAAATTAGCATAGATATTGCCAATAACAGTCCTGAATTATTATTGGCTCTCGATGCCGTGCATTATGAGCGCGGTAA
GGCTTATGTCTTACTCCCGGGGATATTTAATGACACTAAGCAGTACGTCGGCCTTGGTTCTATGGGCAAGGAGCGTGTAG
CGATTACCTCCGGATTAAAAGAGGGTGAGGAGGTATTACTGCCATGA

Upstream 100 bases:

>100_bases
ACAGCAACTGGTTTAGAGTATCGATAAAATTTAAGGTCGACAAGCGAGTGGAGATTATTCCAGGTATGAGCGTGTTAGTT
GAAGCAGGAGTGACCCCCTC

Downstream 100 bases:

>100_bases
TAACAACACAGAGCAAAACTACTAGTGAATTAAAAAGCCGAACAGATTTCACGATAACGGAGCAAAAGCCTAACCTGGTG
CGCACTGTACTGTTAACCAG

Product: membrane-fusion protein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Multidrug Resistance Efflux Pump-Like Protein; RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; HlyD Family Secretion Protein; Periplasmic Component Of Efflux System; Membrane Fusion Protein; Membrane Permease Cation Efflux Pumps; PAS/PAC Sensor Protein; Biotin/Lipoyl Attachment Domain-Containing Protein; Efflux Transporter Rnd Family Mfp Subunit; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKLTLISGFVFGALLTGCSDTVTTQVESGILEQQIEVTGELVSANTVNLKPPALRRVWQYQVKMLAPEGSEVNKGDRVAQ
LDTSNLSQRLSVKAAELETTIQDIETSKLRNAKKLEELKLELAEAKMNQEKSQMKVDISDETVSAIDEQKYLRDAVIAKD
RVKLINQKIELELKGAEQRMKMLAGDQQKFAAEVSTLEKGIKSMTLIAPRAGMVVYGNDQQGNKVAEGQNIFVGDSVLSI
PDLQHMQVNMTIPEVEAGRVKIGQKLKIRLDANPEKSFNGEITELGAVFRVKNQDVPLVIFDAVASISEPDTELMRPGMT
AKISIDIANNSPELLLALDAVHYERGKAYVLLPGIFNDTKQYVGLGSMGKERVAITSGLKEGEEVLLP

Sequences:

>Translated_388_residues
MKLTLISGFVFGALLTGCSDTVTTQVESGILEQQIEVTGELVSANTVNLKPPALRRVWQYQVKMLAPEGSEVNKGDRVAQ
LDTSNLSQRLSVKAAELETTIQDIETSKLRNAKKLEELKLELAEAKMNQEKSQMKVDISDETVSAIDEQKYLRDAVIAKD
RVKLINQKIELELKGAEQRMKMLAGDQQKFAAEVSTLEKGIKSMTLIAPRAGMVVYGNDQQGNKVAEGQNIFVGDSVLSI
PDLQHMQVNMTIPEVEAGRVKIGQKLKIRLDANPEKSFNGEITELGAVFRVKNQDVPLVIFDAVASISEPDTELMRPGMT
AKISIDIANNSPELLLALDAVHYERGKAYVLLPGIFNDTKQYVGLGSMGKERVAITSGLKEGEEVLLP
>Mature_388_residues
MKLTLISGFVFGALLTGCSDTVTTQVESGILEQQIEVTGELVSANTVNLKPPALRRVWQYQVKMLAPEGSEVNKGDRVAQ
LDTSNLSQRLSVKAAELETTIQDIETSKLRNAKKLEELKLELAEAKMNQEKSQMKVDISDETVSAIDEQKYLRDAVIAKD
RVKLINQKIELELKGAEQRMKMLAGDQQKFAAEVSTLEKGIKSMTLIAPRAGMVVYGNDQQGNKVAEGQNIFVGDSVLSI
PDLQHMQVNMTIPEVEAGRVKIGQKLKIRLDANPEKSFNGEITELGAVFRVKNQDVPLVIFDAVASISEPDTELMRPGMT
AKISIDIANNSPELLLALDAVHYERGKAYVLLPGIFNDTKQYVGLGSMGKERVAITSGLKEGEEVLLP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42580; Mature: 42580

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLISGFVFGALLTGCSDTVTTQVESGILEQQIEVTGELVSANTVNLKPPALRRVWQY
CEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCEECCCCHHHHHHHHH
QVKMLAPEGSEVNKGDRVAQLDTSNLSQRLSVKAAELETTIQDIETSKLRNAKKLEELKL
HHEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ELAEAKMNQEKSQMKVDISDETVSAIDEQKYLRDAVIAKDRVKLINQKIELELKGAEQRM
HHHHHHHCCCHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHH
KMLAGDQQKFAAEVSTLEKGIKSMTLIAPRAGMVVYGNDQQGNKVAEGQNIFVGDSVLSI
HHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCEECCCCEEEECCCEECC
PDLQHMQVNMTIPEVEAGRVKIGQKLKIRLDANPEKSFNGEITELGAVFRVKNQDVPLVI
CCCCEEEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHCCEEEEECCCCCCEEE
FDAVASISEPDTELMRPGMTAKISIDIANNSPELLLALDAVHYERGKAYVLLPGIFNDTK
EEHHHHCCCCCHHHHCCCCEEEEEEEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCHH
QYVGLGSMGKERVAITSGLKEGEEVLLP
HHHCCCCCCCCCEEEHHCCCCCCCCCCC
>Mature Secondary Structure
MKLTLISGFVFGALLTGCSDTVTTQVESGILEQQIEVTGELVSANTVNLKPPALRRVWQY
CEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCEECCCCHHHHHHHHH
QVKMLAPEGSEVNKGDRVAQLDTSNLSQRLSVKAAELETTIQDIETSKLRNAKKLEELKL
HHEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ELAEAKMNQEKSQMKVDISDETVSAIDEQKYLRDAVIAKDRVKLINQKIELELKGAEQRM
HHHHHHHCCCHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHH
KMLAGDQQKFAAEVSTLEKGIKSMTLIAPRAGMVVYGNDQQGNKVAEGQNIFVGDSVLSI
HHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCEECCCCEEEECCCEECC
PDLQHMQVNMTIPEVEAGRVKIGQKLKIRLDANPEKSFNGEITELGAVFRVKNQDVPLVI
CCCCEEEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHCCEEEEECCCCCCEEE
FDAVASISEPDTELMRPGMTAKISIDIANNSPELLLALDAVHYERGKAYVLLPGIFNDTK
EEHHHHCCCCCHHHHCCCCEEEEEEEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCHH
QYVGLGSMGKERVAITSGLKEGEEVLLP
HHHCCCCCCCCCEEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA