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The map label for this gene is ydhJ [C]

Identifier: 157961662

GI number: 157961662

Start: 2235809

End: 2236900

Strand: Direct

Name: ydhJ [C]

Synonym: Spea_1838

Alternate gene names: 157961662

Gene position: 2235809-2236900 (Clockwise)

Preceding gene: 157961661

Following gene: 157961663

Centisome position: 43.21

GC content: 44.96

Gene sequence:

>1092_bases
ATGCCGCTTAATGTTATAAACACCCCAAAGGTTAAATTTAAGCGGGGCAATAAGTACTTCAATTTCGCGCTTGGCTTTTC
CATCGTCTTATTGACCAGTTCAAGTGTCGTAACAGAGGCCGTCGCCAGCACTGAGTCTCAGAGCGTTGCTGCTTTGGCAA
ATCATGGTTATGCACCAAATGAAGGTGAACTCATGCCTTTACTGCTCACAGGCCAAGTCGCTTCAGTAGTTTCCCAAGCT
TTTATTGTACCTAAGGCTGGCGATACCTGGCTTTACCAAATTCAATGGATGGCACCTGAAGGTAGTCTGGTAAAACCTGG
TGAAGTGGTGCTTATCTTCGATAAAAGTGAAATTGACAGTCGTATCGAGCAGTTGGAAGGAAGTTTATTAAGGGTGAAAG
CCCAGGAGCAAAGCCAATCTATTGAGCTAAATGCACAGTTATTACAAGCAGAGTTTGAGTTGAAACAAGCTAAATTAGAG
CTTGAGAAGGCCGTACTCGATGCCTCTGTTCCCGCCGATTTCATTGCCGCTAAAGATTATGCCGATTTTCAGTTTAATAA
ATTGAAAGCCGAGTCTGAATTGTCAAAGAAGCATCAAGCATTAGCCGAAATTCAAGATAAGCGTAAGGCGTCATTGTCAC
AGCTCTCAATCGATAAACAGCGTGCAGAGCTAGAGCTTGCTCAGGCGCTATTAGGGCTTGAGCAACTAGAAATTCGCGCC
GATATTGCCGGGCCAGTACTTTATTCAAGAGATCCATGGACAGATAAGAAATATGCCGTAGGAGACAATGCCAGAATAGG
CAGGCAAGTGGTGACGATCCCTGCGTTAAACAATCTCGAAATTATCGCTTGGGTAAATGAGGTGGATGTAGATCGTATTA
AACTGGGAGAACCTGTACGCCTAAGGCTTGATTCTCAAACTCAAGTTACGCTCAGTGGTAATGTTGCCGACGTTAGCCGT
CAGGCTAAGAAGCAGCCTGCATGGGGGAACAGCAACTGGTTTAGAGTATCGATAAAATTTAAGGTCGACAAGCGAGTGGA
GATTATTCCAGGTATGAGCGTGTTAGTTGAAGCAGGAGTGACCCCCTCATGA

Upstream 100 bases:

>100_bases
ATCATCTTAGTGACTCATGAAGAAGAGGTTGCCGCTTATGCCCAGCGTATTATTCGTATGCGCGATGGTGACATCGTCGA
GATAGAAGAAAGAGGTGAAA

Downstream 100 bases:

>100_bases
AGTTGACCCTAATTAGTGGATTCGTGTTTGGCGCACTATTAACCGGTTGCTCAGACACGGTTACCACCCAAGTCGAGTCA
GGTATTCTAGAACAGCAGAT

Product: multidrug resistance efflux pump-like protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MPLNVINTPKVKFKRGNKYFNFALGFSIVLLTSSSVVTEAVASTESQSVAALANHGYAPNEGELMPLLLTGQVASVVSQA
FIVPKAGDTWLYQIQWMAPEGSLVKPGEVVLIFDKSEIDSRIEQLEGSLLRVKAQEQSQSIELNAQLLQAEFELKQAKLE
LEKAVLDASVPADFIAAKDYADFQFNKLKAESELSKKHQALAEIQDKRKASLSQLSIDKQRAELELAQALLGLEQLEIRA
DIAGPVLYSRDPWTDKKYAVGDNARIGRQVVTIPALNNLEIIAWVNEVDVDRIKLGEPVRLRLDSQTQVTLSGNVADVSR
QAKKQPAWGNSNWFRVSIKFKVDKRVEIIPGMSVLVEAGVTPS

Sequences:

>Translated_363_residues
MPLNVINTPKVKFKRGNKYFNFALGFSIVLLTSSSVVTEAVASTESQSVAALANHGYAPNEGELMPLLLTGQVASVVSQA
FIVPKAGDTWLYQIQWMAPEGSLVKPGEVVLIFDKSEIDSRIEQLEGSLLRVKAQEQSQSIELNAQLLQAEFELKQAKLE
LEKAVLDASVPADFIAAKDYADFQFNKLKAESELSKKHQALAEIQDKRKASLSQLSIDKQRAELELAQALLGLEQLEIRA
DIAGPVLYSRDPWTDKKYAVGDNARIGRQVVTIPALNNLEIIAWVNEVDVDRIKLGEPVRLRLDSQTQVTLSGNVADVSR
QAKKQPAWGNSNWFRVSIKFKVDKRVEIIPGMSVLVEAGVTPS
>Mature_362_residues
PLNVINTPKVKFKRGNKYFNFALGFSIVLLTSSSVVTEAVASTESQSVAALANHGYAPNEGELMPLLLTGQVASVVSQAF
IVPKAGDTWLYQIQWMAPEGSLVKPGEVVLIFDKSEIDSRIEQLEGSLLRVKAQEQSQSIELNAQLLQAEFELKQAKLEL
EKAVLDASVPADFIAAKDYADFQFNKLKAESELSKKHQALAEIQDKRKASLSQLSIDKQRAELELAQALLGLEQLEIRAD
IAGPVLYSRDPWTDKKYAVGDNARIGRQVVTIPALNNLEIIAWVNEVDVDRIKLGEPVRLRLDSQTQVTLSGNVADVSRQ
AKKQPAWGNSNWFRVSIKFKVDKRVEIIPGMSVLVEAGVTPS

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40036; Mature: 39905

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNVINTPKVKFKRGNKYFNFALGFSIVLLTSSSVVTEAVASTESQSVAALANHGYAPN
CCCCCCCCCCEEEECCCEEEEEEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCC
EGELMPLLLTGQVASVVSQAFIVPKAGDTWLYQIQWMAPEGSLVKPGEVVLIFDKSEIDS
CCCEEEEEECCHHHHHHHHHEEEECCCCCEEEEEEEECCCCCEECCCCEEEEEECHHHHH
RIEQLEGSLLRVKAQEQSQSIELNAQLLQAEFELKQAKLELEKAVLDASVPADFIAAKDY
HHHHHCCCEEEEEEHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
ADFQFNKLKAESELSKKHQALAEIQDKRKASLSQLSIDKQRAELELAQALLGLEQLEIRA
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEE
DIAGPVLYSRDPWTDKKYAVGDNARIGRQVVTIPALNNLEIIAWVNEVDVDRIKLGEPVR
CCCCCEEECCCCCCCCCEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEE
LRLDSQTQVTLSGNVADVSRQAKKQPAWGNSNWFRVSIKFKVDKRVEIIPGMSVLVEAGV
EEECCCEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCEEEECCCCHHEEECCC
TPS
CCC
>Mature Secondary Structure 
PLNVINTPKVKFKRGNKYFNFALGFSIVLLTSSSVVTEAVASTESQSVAALANHGYAPN
CCCCCCCCCEEEECCCEEEEEEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCC
EGELMPLLLTGQVASVVSQAFIVPKAGDTWLYQIQWMAPEGSLVKPGEVVLIFDKSEIDS
CCCEEEEEECCHHHHHHHHHEEEECCCCCEEEEEEEECCCCCEECCCCEEEEEECHHHHH
RIEQLEGSLLRVKAQEQSQSIELNAQLLQAEFELKQAKLELEKAVLDASVPADFIAAKDY
HHHHHCCCEEEEEEHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
ADFQFNKLKAESELSKKHQALAEIQDKRKASLSQLSIDKQRAELELAQALLGLEQLEIRA
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEE
DIAGPVLYSRDPWTDKKYAVGDNARIGRQVVTIPALNNLEIIAWVNEVDVDRIKLGEPVR
CCCCCEEECCCCCCCCCEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEE
LRLDSQTQVTLSGNVADVSRQAKKQPAWGNSNWFRVSIKFKVDKRVEIIPGMSVLVEAGV
EEECCCEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCEEEECCCCHHEEECCC
TPS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA