| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961659
Identifier: 157961659
GI number: 157961659
Start: 2233617
End: 2234021
Strand: Direct
Name: 157961659
Synonym: Spea_1835
Alternate gene names: NA
Gene position: 2233617-2234021 (Clockwise)
Preceding gene: 157961658
Following gene: 157961660
Centisome position: 43.17
GC content: 48.4
Gene sequence:
>405_bases ATGTTTGCAAAGATTAACTTAGCACTGATTGTACTGGGTGCCAGCACGCTCGCTTTTAATAGCCAAGCGGGGGAGGCGGA AGACGCCTTTGTTAGTGAGCTTGCCGATTGTGCAGCCTATTACCATATCGCGTCTGATGCGATTTCTGCGATGGATGCTC CCCAAATGGCGGCAGTGGTGGATAGGTTAACACTTTCGGGCGAACAGGCGTCGCAATTGGCGAAGCAATATCAAACTGAA GAGCAGGTCTCAGCCGCGATTATCGCAGCCGAAAAGAAGCACCAATCGACTATGCCTAACGGTAAAAGCTTAGGTCCATT GATGGGTAAATATAAAGAGACTTGTAAGAGTATTCTTGCCCAGCCAGAAAAGCGTCTCGATTATTGGACCATGGTCACCA TGTAA
Upstream 100 bases:
>100_bases TATTAATTAAAAGCTAAAGTAGAAATGTATGCTGGAAGCTAAATTCAGCATTAACTATTAGCAATTATCAAAGCAACTAA AAAGAAAAGGATAACCTTCA
Downstream 100 bases:
>100_bases TACTTTTGGGATGAACGCTTTCCTTGAGCTTCCCTCGAACTGACTTAAGCCAGTTAGTCTAAGTGCTTACTGCAAATGTG AATAGAGTCGCCAAACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFAKINLALIVLGASTLAFNSQAGEAEDAFVSELADCAAYYHIASDAISAMDAPQMAAVVDRLTLSGEQASQLAKQYQTE EQVSAAIIAAEKKHQSTMPNGKSLGPLMGKYKETCKSILAQPEKRLDYWTMVTM
Sequences:
>Translated_134_residues MFAKINLALIVLGASTLAFNSQAGEAEDAFVSELADCAAYYHIASDAISAMDAPQMAAVVDRLTLSGEQASQLAKQYQTE EQVSAAIIAAEKKHQSTMPNGKSLGPLMGKYKETCKSILAQPEKRLDYWTMVTM >Mature_134_residues MFAKINLALIVLGASTLAFNSQAGEAEDAFVSELADCAAYYHIASDAISAMDAPQMAAVVDRLTLSGEQASQLAKQYQTE EQVSAAIIAAEKKHQSTMPNGKSLGPLMGKYKETCKSILAQPEKRLDYWTMVTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14451; Mature: 14451
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAKINLALIVLGASTLAFNSQAGEAEDAFVSELADCAAYYHIASDAISAMDAPQMAAVV CCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH DRLTLSGEQASQLAKQYQTEEQVSAAIIAAEKKHQSTMPNGKSLGPLMGKYKETCKSILA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH QPEKRLDYWTMVTM CHHHHCCHHHEECC >Mature Secondary Structure MFAKINLALIVLGASTLAFNSQAGEAEDAFVSELADCAAYYHIASDAISAMDAPQMAAVV CCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH DRLTLSGEQASQLAKQYQTEEQVSAAIIAAEKKHQSTMPNGKSLGPLMGKYKETCKSILA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH QPEKRLDYWTMVTM CHHHHCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA