| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961656
Identifier: 157961656
GI number: 157961656
Start: 2231316
End: 2231909
Strand: Direct
Name: 157961656
Synonym: Spea_1832
Alternate gene names: NA
Gene position: 2231316-2231909 (Clockwise)
Preceding gene: 157961655
Following gene: 157961657
Centisome position: 43.12
GC content: 44.44
Gene sequence:
>594_bases ATGCAATTTGTTAATTTATATCAAAAGTTTTTAAGCACGTTAAAGTATGGTGAAGGACTTGCGCCACTTGCGCTACGTCT GTATTTAGCCCCTGTATTGATGCAAGCCGGATATAATAAACTTTCCCACTTTAGTGACTCCGCAGCTTGGTTTGGTAACC CAGACTGGGGACTTGGACTACCGTTTCCAGAGGTGATGGTTGCACTTGCCGCTGGTACAGAGTTTTTTGGTGGTGCCTTG CTGGTGGTAGGTTTGGCGACTCGACTCGTCTCAATTCCTTTAGCCTTCACCATGTTAGTCGCAGCTTTTAGTGTACATAT TGAAAATGGCTGGCTGGCGATTGCTGACTCAAGCTCTTGGCTGGCAAATGAGAATGTTCTCGCCTCGGCCGAGAAGTTGC AGCAGGCTAAACAAATTCTACAAGACAATGGTAACTACGAATGGTTAACCAGCTCAGGTAACTTGGTGATCTTAAATAAT GGTATTGAGTTTGCCATTACGTATTTGTTTATGCTTTTAGCTCTAGTGTTTATGGGGGGAGGACGTTACACCAGCCTTGA TTACTATATCGCTAGGCGCAATGATATTGCCTAG
Upstream 100 bases:
>100_bases CTCACTGAAAGATAGTTACCCTTTAGAGGGTCTGTATAAACAAGTGCTCTTAAGCATCGCCTTTTAGCTACTTAAGTGAT TAATTTGAAGAGGGAATCAA
Downstream 100 bases:
>100_bases GTGTCACACTAGCGGCTTATGATACTAACGAGATCCCACTGAGTAAGTGGGATTTTTTGTATTATCGGCTCTGGGTTTGC TATTTTTGGTAAATTTAACC
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Subfamily; DoxD-Like Family Protein; DoxX Protein
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MQFVNLYQKFLSTLKYGEGLAPLALRLYLAPVLMQAGYNKLSHFSDSAAWFGNPDWGLGLPFPEVMVALAAGTEFFGGAL LVVGLATRLVSIPLAFTMLVAAFSVHIENGWLAIADSSSWLANENVLASAEKLQQAKQILQDNGNYEWLTSSGNLVILNN GIEFAITYLFMLLALVFMGGGRYTSLDYYIARRNDIA
Sequences:
>Translated_197_residues MQFVNLYQKFLSTLKYGEGLAPLALRLYLAPVLMQAGYNKLSHFSDSAAWFGNPDWGLGLPFPEVMVALAAGTEFFGGAL LVVGLATRLVSIPLAFTMLVAAFSVHIENGWLAIADSSSWLANENVLASAEKLQQAKQILQDNGNYEWLTSSGNLVILNN GIEFAITYLFMLLALVFMGGGRYTSLDYYIARRNDIA >Mature_197_residues MQFVNLYQKFLSTLKYGEGLAPLALRLYLAPVLMQAGYNKLSHFSDSAAWFGNPDWGLGLPFPEVMVALAAGTEFFGGAL LVVGLATRLVSIPLAFTMLVAAFSVHIENGWLAIADSSSWLANENVLASAEKLQQAKQILQDNGNYEWLTSSGNLVILNN GIEFAITYLFMLLALVFMGGGRYTSLDYYIARRNDIA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21584; Mature: 21584
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVNLYQKFLSTLKYGEGLAPLALRLYLAPVLMQAGYNKLSHFSDSAAWFGNPDWGLGL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC PFPEVMVALAAGTEFFGGALLVVGLATRLVSIPLAFTMLVAAFSVHIENGWLAIADSSSW CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCC LANENVLASAEKLQQAKQILQDNGNYEWLTSSGNLVILNNGIEFAITYLFMLLALVFMGG CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCC GRYTSLDYYIARRNDIA CCEEEHEEEEECCCCCC >Mature Secondary Structure MQFVNLYQKFLSTLKYGEGLAPLALRLYLAPVLMQAGYNKLSHFSDSAAWFGNPDWGLGL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC PFPEVMVALAAGTEFFGGALLVVGLATRLVSIPLAFTMLVAAFSVHIENGWLAIADSSSW CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCC LANENVLASAEKLQQAKQILQDNGNYEWLTSSGNLVILNNGIEFAITYLFMLLALVFMGG CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCC GRYTSLDYYIARRNDIA CCEEEHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA