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The map label for this gene is narT [H]

Identifier: 157961637

GI number: 157961637

Start: 2215078

End: 2216544

Strand: Direct

Name: narT [H]

Synonym: Spea_1813

Alternate gene names: 157961637

Gene position: 2215078-2216544 (Clockwise)

Preceding gene: 157961636

Following gene: 157961638

Centisome position: 42.81

GC content: 45.94

Gene sequence:

>1467_bases
ATGAGTTCTCAAGCATTCAATCTTTTCTCCTTTAGCGGAAAAATGAAAGTCATGCACTTAAGCTGGATGGCATTTTTTAT
CACCTTTATGGTCTGGTTTAATGCCGCTCCCTTGATGAGTGTGATAGCGGCTAGCTTAGGCTTAACCCACTCACAAATTA
AAACCTTGTTGATTCTCAATGTGGCATTGACGATCCCAGCAAGGGTGATAATAGGAATGCTAACTGACCGCTATGGGCCA
AGAAAAGTCTATTCTCTGCTGCTGGGCTTGTGTGCGATCCCCTGCTTTATGTTTGCCCTTGGAACCAGCTTTGAACAGCT
TGCCTTAGCACGGTTTTTATTGGGGTTTATTGGTGCAGGTTTTGTGGTTGGGATCCGTATGGTGAGTGAATGGTTTCCAG
CAAAAGAGCTCGGGGTTGCAGAGGGGGTTTACGCTGGTTGGGGGAATTTTGGCTCCGCAGCGGCGGCATTTACCTTACCA
GCGGTGGCGTTGGCATTTGGTGGTGATGATGGCTGGCGCTATGCCGTCGGGTTAACGGGGGCTATTAGCCTTGTGTTTGC
GTTTATCTATTATGCCAATGTTACAGACACGCCAAAGGGAGCTACCTATTTTAAGCCTAAAAAAGCTGGCGCACTGGAAG
TCACCAGCAAAAAAGACTTGCTGTTGCTGGTGGTGATGAAACTACCTATGTATGCAACTTTGGCTTTACTGGCCTGGAAA
CTTTCTCCCTCCGGTGTAGCTCTGTTATCTGACAATACAGAAAAGGGGATTTACTTATTATTGACAGTGATTTTAGCTGC
GGATCTATTGCAGACTTTTAATGTCAACAAAGCGGTTTTTAACGGCAGTATCCCTGAGTTTGAACGCTATGAATTTAAGC
AAGTCGCGGTGTTAAATGTGCTTTATTTTACAACCTTCGGTTCTGAACTCGCAGTGGTGTCTATGCTACCGCTCTATTTC
GCAGAAACATTCGAATTAGGTATGACACAGGCTGGCATGGTGGCGTCGTCTTACGCTTTTATGAACTTAATGTCTCGACC
AGGAGGCGGTTGGTTAAGTGATCGTTTTGGCCGTAAATCAACGCTATTAATCCTGACTGCCGGGCTGGCATTAGGTTATT
TGGGAGTGGCACAAATAGACAGCAGTTGGGCATTACCGTTGGCGATAATTATGGTGATGCTGTGTTCATTCTTCGTTCAA
AGTGGAGAAGGCGCAGTCTTTGCGGCAGTGCCGTTAATTAAGCGCCGCTTAACGGGCCAGATAGCGGGAATGACTGGTGC
TTATGGTAATGTTGGTGCGGTGTTTTTCTTAACCGTGTACTCGATGGTGGCGACTCAAACATTCTTTTATGTTATTGCGG
CTAGTGCACTATTTGGTTTTTTGACCCTGTTTTTATTGACTGAGCCAAAGGGACACATCGCCGAGGTTAATGAGGACGGA
GAAGTCACATTAATTAGTGTGAGCTGA

Upstream 100 bases:

>100_bases
TTAAAAAAAGAGCAAGGTAGGGTCCTCGCAAAATTGCCTTTTCAAGCTGCATGCGCGTCAGGCAGTGCTCTGTCCACCCC
AGTAAAAGGAGCAAGGTAAC

Downstream 100 bases:

>100_bases
GCTTATGTCGACAATCCAGCCCTTTGATGAACAGCAAATTGCCAGTGTTGGCACTTCTGTGCTGGCACTATGTGTCGGTC
AACACACTGATAAAGGACGA

Product: nitrite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MSSQAFNLFSFSGKMKVMHLSWMAFFITFMVWFNAAPLMSVIAASLGLTHSQIKTLLILNVALTIPARVIIGMLTDRYGP
RKVYSLLLGLCAIPCFMFALGTSFEQLALARFLLGFIGAGFVVGIRMVSEWFPAKELGVAEGVYAGWGNFGSAAAAFTLP
AVALAFGGDDGWRYAVGLTGAISLVFAFIYYANVTDTPKGATYFKPKKAGALEVTSKKDLLLLVVMKLPMYATLALLAWK
LSPSGVALLSDNTEKGIYLLLTVILAADLLQTFNVNKAVFNGSIPEFERYEFKQVAVLNVLYFTTFGSELAVVSMLPLYF
AETFELGMTQAGMVASSYAFMNLMSRPGGGWLSDRFGRKSTLLILTAGLALGYLGVAQIDSSWALPLAIIMVMLCSFFVQ
SGEGAVFAAVPLIKRRLTGQIAGMTGAYGNVGAVFFLTVYSMVATQTFFYVIAASALFGFLTLFLLTEPKGHIAEVNEDG
EVTLISVS

Sequences:

>Translated_488_residues
MSSQAFNLFSFSGKMKVMHLSWMAFFITFMVWFNAAPLMSVIAASLGLTHSQIKTLLILNVALTIPARVIIGMLTDRYGP
RKVYSLLLGLCAIPCFMFALGTSFEQLALARFLLGFIGAGFVVGIRMVSEWFPAKELGVAEGVYAGWGNFGSAAAAFTLP
AVALAFGGDDGWRYAVGLTGAISLVFAFIYYANVTDTPKGATYFKPKKAGALEVTSKKDLLLLVVMKLPMYATLALLAWK
LSPSGVALLSDNTEKGIYLLLTVILAADLLQTFNVNKAVFNGSIPEFERYEFKQVAVLNVLYFTTFGSELAVVSMLPLYF
AETFELGMTQAGMVASSYAFMNLMSRPGGGWLSDRFGRKSTLLILTAGLALGYLGVAQIDSSWALPLAIIMVMLCSFFVQ
SGEGAVFAAVPLIKRRLTGQIAGMTGAYGNVGAVFFLTVYSMVATQTFFYVIAASALFGFLTLFLLTEPKGHIAEVNEDG
EVTLISVS
>Mature_487_residues
SSQAFNLFSFSGKMKVMHLSWMAFFITFMVWFNAAPLMSVIAASLGLTHSQIKTLLILNVALTIPARVIIGMLTDRYGPR
KVYSLLLGLCAIPCFMFALGTSFEQLALARFLLGFIGAGFVVGIRMVSEWFPAKELGVAEGVYAGWGNFGSAAAAFTLPA
VALAFGGDDGWRYAVGLTGAISLVFAFIYYANVTDTPKGATYFKPKKAGALEVTSKKDLLLLVVMKLPMYATLALLAWKL
SPSGVALLSDNTEKGIYLLLTVILAADLLQTFNVNKAVFNGSIPEFERYEFKQVAVLNVLYFTTFGSELAVVSMLPLYFA
ETFELGMTQAGMVASSYAFMNLMSRPGGGWLSDRFGRKSTLLILTAGLALGYLGVAQIDSSWALPLAIIMVMLCSFFVQS
GEGAVFAAVPLIKRRLTGQIAGMTGAYGNVGAVFFLTVYSMVATQTFFYVIAASALFGFLTLFLLTEPKGHIAEVNEDGE
VTLISVS

Specific function: Probably required for nitrate uptake under anoxic conditions. Also possibly involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]

COG id: COG2223

COG function: function code P; Nitrate/nitrite transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 52631; Mature: 52500

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQAFNLFSFSGKMKVMHLSWMAFFITFMVWFNAAPLMSVIAASLGLTHSQIKTLLILN
CCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
VALTIPARVIIGMLTDRYGPRKVYSLLLGLCAIPCFMFALGTSFEQLALARFLLGFIGAG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FVVGIRMVSEWFPAKELGVAEGVYAGWGNFGSAAAAFTLPAVALAFGGDDGWRYAVGLTG
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEHHH
AISLVFAFIYYANVTDTPKGATYFKPKKAGALEVTSKKDLLLLVVMKLPMYATLALLAWK
HHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHC
LSPSGVALLSDNTEKGIYLLLTVILAADLLQTFNVNKAVFNGSIPEFERYEFKQVAVLNV
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHH
LYFTTFGSELAVVSMLPLYFAETFELGMTQAGMVASSYAFMNLMSRPGGGWLSDRFGRKS
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
TLLILTAGLALGYLGVAQIDSSWALPLAIIMVMLCSFFVQSGEGAVFAAVPLIKRRLTGQ
EEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
IAGMTGAYGNVGAVFFLTVYSMVATQTFFYVIAASALFGFLTLFLLTEPKGHIAEVNEDG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
EVTLISVS
CEEEEEEC
>Mature Secondary Structure 
SSQAFNLFSFSGKMKVMHLSWMAFFITFMVWFNAAPLMSVIAASLGLTHSQIKTLLILN
CCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
VALTIPARVIIGMLTDRYGPRKVYSLLLGLCAIPCFMFALGTSFEQLALARFLLGFIGAG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FVVGIRMVSEWFPAKELGVAEGVYAGWGNFGSAAAAFTLPAVALAFGGDDGWRYAVGLTG
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEHHH
AISLVFAFIYYANVTDTPKGATYFKPKKAGALEVTSKKDLLLLVVMKLPMYATLALLAWK
HHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHC
LSPSGVALLSDNTEKGIYLLLTVILAADLLQTFNVNKAVFNGSIPEFERYEFKQVAVLNV
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHH
LYFTTFGSELAVVSMLPLYFAETFELGMTQAGMVASSYAFMNLMSRPGGGWLSDRFGRKS
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
TLLILTAGLALGYLGVAQIDSSWALPLAIIMVMLCSFFVQSGEGAVFAAVPLIKRRLTGQ
EEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
IAGMTGAYGNVGAVFFLTVYSMVATQTFFYVIAASALFGFLTLFLLTEPKGHIAEVNEDG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
EVTLISVS
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9082911; 12426351 [H]