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The map label for this gene is 157961617

Identifier: 157961617

GI number: 157961617

Start: 2189752

End: 2190672

Strand: Direct

Name: 157961617

Synonym: Spea_1793

Alternate gene names: NA

Gene position: 2189752-2190672 (Clockwise)

Preceding gene: 157961616

Following gene: 157961619

Centisome position: 42.32

GC content: 42.02

Gene sequence:

>921_bases
ATGTCGACGATTTCGATTATTTTTCCGTTACTTTTTATGGCGAGTCTAGGTTATCTATTAACCGCTAAAGGCCCATTTAC
AAAAGAGCATATTGCTGGGATCAGTCTTTTTACATTTTATATCTGTATTCCCGCCTTTTTGTTTATCAATATGTATCAGG
CAGACTTGGAAAGCAGCTTTGATATATTCAGTCTAAGTAGTTTTTACCTACCCGTTATCGCGACTTTTGGCTTAAGCGCA
GGGCTATATTACTGTTTCAGCCCTAAGGGAGCTCCTAGGAAAGCAAAGAGTGCCGTTTATGCGTTAGGTTGTAGCTACTC
AAATACAATATTGGTTGGATTGCCGATTATCGTAGGGGCACTAGGGGAGCAGATGATGGGGAAGGTGTTTGCAGTGATCA
CCTTTCATAGTGCCTTACTGTTTTCATTAACTTTTATTTTGAGTGCTAAGCAGAGTCATGCTGGAGCTTGGAAATTTAGT
AAAGGGATCATACTAAACCCGATTGTATTGAGTATCTCTGCTGGCCTCATCTTAAACCTACTGCAGGTGCCTATAGAGAA
CAATCTAGTCAATGGCTTGAGCTTACTCAGCGAGCCCGCTCTCGCTTGTGCACTCTTTGTCCTAGGCGCAAATCTATCAT
TCTATAAGATTGCAAAAGATTGGCATTTGGCATTGATTGCATCGGTGATTAAATTACTGGTTTTGCCATTGTGTGTATAT
GGCATTGGTCGCTTTGTGTTTTCTATTGAGGGAGATTCGTTAGCGCTGCTGGTGTTGCTCAGTGCTTCGCCTTTAGGAGT
CAATGCGTATCTAGTTGCTATGCAGCTACAAGCTCAACAGGCTGTTATAGCCAGTACCGTAGTCATGTCTACGGTACTGT
CAGTGTTTACAATGAGTTTGTGGCTTAGCCTGTTAGTTTGA

Upstream 100 bases:

>100_bases
AAAGCCCATTGTTAACAAACATTTTTCAACTCTGTTATCATGCGCTCGTTGTAATGAACGCGTTTGATTTCTTTTTGCCA
AAGAGCAGGTACTTGACTTA

Downstream 100 bases:

>100_bases
TTAACCTTGCTTATGAGTTCGTGAAAGCTCTGCTGGACTGAGAATGTAGACATCCTCTGAATAGAAGTCTTCAGTCTGAG
CCATGCTCCACCAATGGTTC

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSTISIIFPLLFMASLGYLLTAKGPFTKEHIAGISLFTFYICIPAFLFINMYQADLESSFDIFSLSSFYLPVIATFGLSA
GLYYCFSPKGAPRKAKSAVYALGCSYSNTILVGLPIIVGALGEQMMGKVFAVITFHSALLFSLTFILSAKQSHAGAWKFS
KGIILNPIVLSISAGLILNLLQVPIENNLVNGLSLLSEPALACALFVLGANLSFYKIAKDWHLALIASVIKLLVLPLCVY
GIGRFVFSIEGDSLALLVLLSASPLGVNAYLVAMQLQAQQAVIASTVVMSTVLSVFTMSLWLSLLV

Sequences:

>Translated_306_residues
MSTISIIFPLLFMASLGYLLTAKGPFTKEHIAGISLFTFYICIPAFLFINMYQADLESSFDIFSLSSFYLPVIATFGLSA
GLYYCFSPKGAPRKAKSAVYALGCSYSNTILVGLPIIVGALGEQMMGKVFAVITFHSALLFSLTFILSAKQSHAGAWKFS
KGIILNPIVLSISAGLILNLLQVPIENNLVNGLSLLSEPALACALFVLGANLSFYKIAKDWHLALIASVIKLLVLPLCVY
GIGRFVFSIEGDSLALLVLLSASPLGVNAYLVAMQLQAQQAVIASTVVMSTVLSVFTMSLWLSLLV
>Mature_305_residues
STISIIFPLLFMASLGYLLTAKGPFTKEHIAGISLFTFYICIPAFLFINMYQADLESSFDIFSLSSFYLPVIATFGLSAG
LYYCFSPKGAPRKAKSAVYALGCSYSNTILVGLPIIVGALGEQMMGKVFAVITFHSALLFSLTFILSAKQSHAGAWKFSK
GIILNPIVLSISAGLILNLLQVPIENNLVNGLSLLSEPALACALFVLGANLSFYKIAKDWHLALIASVIKLLVLPLCVYG
IGRFVFSIEGDSLALLVLLSASPLGVNAYLVAMQLQAQQAVIASTVVMSTVLSVFTMSLWLSLLV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 32848; Mature: 32717

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTISIIFPLLFMASLGYLLTAKGPFTKEHIAGISLFTFYICIPAFLFINMYQADLESSF
CCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIFSLSSFYLPVIATFGLSAGLYYCFSPKGAPRKAKSAVYALGCSYSNTILVGLPIIVGA
CHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHEEEECCCCCEEEEHHHHHHHH
LGEQMMGKVFAVITFHSALLFSLTFILSAKQSHAGAWKFSKGIILNPIVLSISAGLILNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEECHHHHHHHHHHHHHH
LQVPIENNLVNGLSLLSEPALACALFVLGANLSFYKIAKDWHLALIASVIKLLVLPLCVY
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
GIGRFVFSIEGDSLALLVLLSASPLGVNAYLVAMQLQAQQAVIASTVVMSTVLSVFTMSL
HHHHHEEEECCCCEEEEEEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLSLLV
HHHHHC
>Mature Secondary Structure 
STISIIFPLLFMASLGYLLTAKGPFTKEHIAGISLFTFYICIPAFLFINMYQADLESSF
CHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIFSLSSFYLPVIATFGLSAGLYYCFSPKGAPRKAKSAVYALGCSYSNTILVGLPIIVGA
CHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHEEEECCCCCEEEEHHHHHHHH
LGEQMMGKVFAVITFHSALLFSLTFILSAKQSHAGAWKFSKGIILNPIVLSISAGLILNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEECHHHHHHHHHHHHHH
LQVPIENNLVNGLSLLSEPALACALFVLGANLSFYKIAKDWHLALIASVIKLLVLPLCVY
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
GIGRFVFSIEGDSLALLVLLSASPLGVNAYLVAMQLQAQQAVIASTVVMSTVLSVFTMSL
HHHHHEEEECCCCEEEEEEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLSLLV
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]