| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961616
Identifier: 157961616
GI number: 157961616
Start: 2189051
End: 2189359
Strand: Direct
Name: 157961616
Synonym: Spea_1792
Alternate gene names: NA
Gene position: 2189051-2189359 (Clockwise)
Preceding gene: 157961615
Following gene: 157961617
Centisome position: 42.3
GC content: 41.42
Gene sequence:
>309_bases ATGTCTATGGTCAGTGCAAAAGAGTTTTCCGATTGGTTAAGGCTGAGATTTGGCAGTCTTAAAGAGGGCGTTTCCCTTAC GCGTAGTGACATTAACCAGTTAACTGGTCGGCAAAATTTCTCATCTGACTTTGTGAATGATATTCACTTTGAGCTAATGC GCCACGGTTTAGCGTTCGTCACAGATACCTCTAGAGAAGAGTTTTACTTGGTGCCGATCAACAAGCAGTCTTGGCGTGAG CAGTTAGAGCAGCAATTCGAAAAAGAAATTTTCTGCAATATTATCCCACTTAATATCTCCAGTAAGTAA
Upstream 100 bases:
>100_bases ACTTTTGGTGATAAAAACGCAATATTTGGTCAAAAAAATGGCGGACTTAAGCCAATCTGTTATACCTAATTTATCTATTG GGAGCTTGCAGGTAACATTT
Downstream 100 bases:
>100_bases GGGCTCGTGGAGCCCCTATCCATTTCGCATTTCCGCGAAATGGATGGCTAATCGAAAAAATCGGCTACCCGAAAGACTTT GCTTTGGCATTGATTTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSMVSAKEFSDWLRLRFGSLKEGVSLTRSDINQLTGRQNFSSDFVNDIHFELMRHGLAFVTDTSREEFYLVPINKQSWRE QLEQQFEKEIFCNIIPLNISSK
Sequences:
>Translated_102_residues MSMVSAKEFSDWLRLRFGSLKEGVSLTRSDINQLTGRQNFSSDFVNDIHFELMRHGLAFVTDTSREEFYLVPINKQSWRE QLEQQFEKEIFCNIIPLNISSK >Mature_101_residues SMVSAKEFSDWLRLRFGSLKEGVSLTRSDINQLTGRQNFSSDFVNDIHFELMRHGLAFVTDTSREEFYLVPINKQSWREQ LEQQFEKEIFCNIIPLNISSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12008; Mature: 11877
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMVSAKEFSDWLRLRFGSLKEGVSLTRSDINQLTGRQNFSSDFVNDIHFELMRHGLAFV CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEE TDTSREEFYLVPINKQSWREQLEQQFEKEIFCNIIPLNISSK ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure SMVSAKEFSDWLRLRFGSLKEGVSLTRSDINQLTGRQNFSSDFVNDIHFELMRHGLAFV CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEE TDTSREEFYLVPINKQSWREQLEQQFEKEIFCNIIPLNISSK ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA