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The map label for this gene is ycaR [C]

Identifier: 157961596

GI number: 157961596

Start: 2155015

End: 2155188

Strand: Direct

Name: ycaR [C]

Synonym: Spea_1772

Alternate gene names: 157961596

Gene position: 2155015-2155188 (Clockwise)

Preceding gene: 157961595

Following gene: 157961597

Centisome position: 41.65

GC content: 40.8

Gene sequence:

>174_bases
ATGGCATTTGATAAAAAATTACTCGAAATCGTTGCGTGTCCAGTGTGTAAAGGCAAACTTGAATTCAACAAAGAAGCCCA
ACAGCTGATCTGTAAAGCCGATAAGCTGGCTTATCCAATCAATGACGGTATTCCGGTATTGCTAGAGAATAAAGCAGAGC
CATTGGCCGAATAA

Upstream 100 bases:

>100_bases
GGTGGTCTCTCGCGGTAGATGCGAAGCTATCTCCCTCATTTGATAAACAACTACTGGCCAAAATTGATAGGTTGGTAGCA
GATAAGTAAAGGCATTCGAA

Downstream 100 bases:

>100_bases
GTTTTGAGACCTAATAAAAAAGCGCCTTTTGGCGCTTTTTTATATTTCATATCAATAGACATGAATTATCGCGTCACCGT
TTTCCAGTTTTTAAGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAFDKKLLEIVACPVCKGKLEFNKEAQQLICKADKLAYPINDGIPVLLENKAEPLAE

Sequences:

>Translated_57_residues
MAFDKKLLEIVACPVCKGKLEFNKEAQQLICKADKLAYPINDGIPVLLENKAEPLAE
>Mature_56_residues
AFDKKLLEIVACPVCKGKLEFNKEAQQLICKADKLAYPINDGIPVLLENKAEPLAE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=54, Percent_Identity=62.962962962963, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1772_SHEPA (A8H3F8)

Other databases:

- EMBL:   CP000851
- RefSeq:   YP_001501630.1
- ProteinModelPortal:   A8H3F8
- SMR:   A8H3F8
- STRING:   A8H3F8
- GeneID:   5662167
- GenomeReviews:   CP000851_GR
- KEGG:   spl:Spea_1772
- NMPDR:   fig|398579.3.peg.1526
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK982101
- BioCyc:   SPEA398579:SPEA_1772-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6316; Mature: 6184

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDKKLLEIVACPVCKGKLEFNKEAQQLICKADKLAYPINDGIPVLLENKAEPLAE
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
AFDKKLLEIVACPVCKGKLEFNKEAQQLICKADKLAYPINDGIPVLLENKAEPLAE
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA