Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961568
Identifier: 157961568
GI number: 157961568
Start: 2121344
End: 2122039
Strand: Direct
Name: 157961568
Synonym: Spea_1744
Alternate gene names: NA
Gene position: 2121344-2122039 (Clockwise)
Preceding gene: 157961567
Following gene: 157961571
Centisome position: 41.0
GC content: 46.7
Gene sequence:
>696_bases ATGGACTTCATAGAGATATACCCAAATGCAATCCCTGATGAATTTTGTGATGAGTTGATTAGCCGCTTTGAACGTCACTC TGGCGTCAGTGCAGGCTGTACCGGCAGTGGCGTCGATGAGTCGAAAAAGCGCAGCTTAGATTTGATGTTAGACTCCCATG AAGATCTCACTGGGCTTAAGAACAGACTGCTGGGTTATACGTTATCCCATGCGACTCAATATTTTGATAAGTATGCGATG GCGTTGATGGGCGCGGTAGCGGTTAATGTGGCTGATGAACAGGGTCAATCTGTAACGCTAACACCTGAGAACTATGAGCG CTATGGCAAGGGGCGAGCCGAAGCCATCGTTAAATACCTTTACCGTAGTGGTAGTATCAATATCCAAAAGTACCTACAAG CCAAGGGCGGTTATCCTCACTGGCATTCGGAGCAATTTCCTCAGGCCGGTCATAGCGAAGCGTTGCACCGAGTTGTTTTA TATATGTTTTATCTTAACGATGTGGAAGAGGGCGGTGAGACGGAGTTCTACTATCAAAACAAATTGATCAAACCCAAAAA GGGCACCATGGTGATAGCGCCAGCGAGTTTTACTCACTCCCATCGGGGCAATGTACCAACAAGTGGCAACAAGTATATTG CCACCTCTTGGATCATGTTTAATCGCGCCGAGCAGTTATATGGGGCTGCTAAATAA
Upstream 100 bases:
>100_bases ACAAGCTGTTAGCGCTACATTGCTATTTCTCCTCAAGTTATATAGTTTACAATTCGTTAACCAATCTGTTTTCAAATGCC GCTAACCAGAGAGCCTTAAA
Downstream 100 bases:
>100_bases TATTAAGGCAATTGAAGCAGGGAGAACACGCATTCAGTGCCGATGTTATCCCCGTGTGTTAAGTGAATGCTGAGACTCGA GTCCGATTTAAATCGGAATG
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: Prolyl 4-Hydroxylase Alpha Subunit; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; Dioxygenase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MDFIEIYPNAIPDEFCDELISRFERHSGVSAGCTGSGVDESKKRSLDLMLDSHEDLTGLKNRLLGYTLSHATQYFDKYAM ALMGAVAVNVADEQGQSVTLTPENYERYGKGRAEAIVKYLYRSGSINIQKYLQAKGGYPHWHSEQFPQAGHSEALHRVVL YMFYLNDVEEGGETEFYYQNKLIKPKKGTMVIAPASFTHSHRGNVPTSGNKYIATSWIMFNRAEQLYGAAK
Sequences:
>Translated_231_residues MDFIEIYPNAIPDEFCDELISRFERHSGVSAGCTGSGVDESKKRSLDLMLDSHEDLTGLKNRLLGYTLSHATQYFDKYAM ALMGAVAVNVADEQGQSVTLTPENYERYGKGRAEAIVKYLYRSGSINIQKYLQAKGGYPHWHSEQFPQAGHSEALHRVVL YMFYLNDVEEGGETEFYYQNKLIKPKKGTMVIAPASFTHSHRGNVPTSGNKYIATSWIMFNRAEQLYGAAK >Mature_231_residues MDFIEIYPNAIPDEFCDELISRFERHSGVSAGCTGSGVDESKKRSLDLMLDSHEDLTGLKNRLLGYTLSHATQYFDKYAM ALMGAVAVNVADEQGQSVTLTPENYERYGKGRAEAIVKYLYRSGSINIQKYLQAKGGYPHWHSEQFPQAGHSEALHRVVL YMFYLNDVEEGGETEFYYQNKLIKPKKGTMVIAPASFTHSHRGNVPTSGNKYIATSWIMFNRAEQLYGAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26014; Mature: 26014
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFIEIYPNAIPDEFCDELISRFERHSGVSAGCTGSGVDESKKRSLDLMLDSHEDLTGLK CCHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHEECCCCHHHHHH NRLLGYTLSHATQYFDKYAMALMGAVAVNVADEQGQSVTLTPENYERYGKGRAEAIVKYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHCCCHHHHHHHHH YRSGSINIQKYLQAKGGYPHWHSEQFPQAGHSEALHRVVLYMFYLNDVEEGGETEFYYQN HHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC KLIKPKKGTMVIAPASFTHSHRGNVPTSGNKYIATSWIMFNRAEQLYGAAK CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCC >Mature Secondary Structure MDFIEIYPNAIPDEFCDELISRFERHSGVSAGCTGSGVDESKKRSLDLMLDSHEDLTGLK CCHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHEECCCCHHHHHH NRLLGYTLSHATQYFDKYAMALMGAVAVNVADEQGQSVTLTPENYERYGKGRAEAIVKYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHCCCHHHHHHHHH YRSGSINIQKYLQAKGGYPHWHSEQFPQAGHSEALHRVVLYMFYLNDVEEGGETEFYYQN HHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC KLIKPKKGTMVIAPASFTHSHRGNVPTSGNKYIATSWIMFNRAEQLYGAAK CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA