Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is tyrA [H]
Identifier: 157960882
GI number: 157960882
Start: 1276112
End: 1277266
Strand: Direct
Name: tyrA [H]
Synonym: Spea_1054
Alternate gene names: 157960882
Gene position: 1276112-1277266 (Clockwise)
Preceding gene: 157960881
Following gene: 157960883
Centisome position: 24.66
GC content: 46.06
Gene sequence:
>1155_bases ATGGAAGAAACACAGATGAATGAGAAGACTACCGCAGAGCTTGAAAATCTAAGAGGTTTGATTGACGGTGTCGATCAGCA GTTACTGCACCTGTTACGCAAACGATTAGACTTGGTGGCCCAAGTTGGCGCGGTGAAGCATGGTGCTGGTCTACCGATTT ATGCGCCGCAGCGTGAAGCCAATATGCTAGCAAAAAGACGCGAAGAAGCTAAGGCGATGAATGTGGCGCCACAGTTGATT GAAGATATCCTGCGTCGCCTTATGCGAGAGTCCTACCTTAATGAAAAAGATGTTGGCTTTAAGCAAATTAAAGCTGATCT TGGACATGTGGTGATTGTTGGTGGAGAGGGCAAACTTGGCGGCTTGTTTTCGCAAATGCTAACGTTATCGGGTTATGAGG TTAAATCTCTCGATAAAGATGATTGGGCCAATAGCCAGGCTATTTTCGATGGTGCAGGTCTTGTGATTGTAACTGTGCCT ATCAACATCACCTGTGATCTCATTGCAGACAAGCTGACGAACTTACCTGAAAATTGCATCTTGGCAGATCTCACATCCAT TAAAGGCGCGCCAGTTGACGCAATGCTCGCGGCGCATTCAGGCCCAGTGCTTGGGTTACATCCTATGTTTGGCCCTGATG TAGGTAGTTTAGCTAAACAAGTTGTGGTGGTGTGTCATGGGCGTAATCCTGAGGCTTATCAATGGTTGATTGAACAGATT GAAATCTGGGGTGCACGCATTGTTGAAGCCGAGCCGAGTAAACATGATAAAGCGATGCAGCTGGTACAGGCGATGCGACA TTTCTCTTCCTTTGTTTACGGGTTAAACCTTTATAAAGAAGAAGCGGATATCGAGTCTTTACTGCAGTTTAGCTCACCGA TTTACCGCTTAGAGCTGGCGATGGTGGGACGCTTGTTTGCCCAAAGCCCAGAGCTTTACGCCGATATTATTTTTGCTCAA GAAGAAAGCTTAGTAGCGATTGGTGATTACTTAGATAACTACTCTCAGGCGCTATCTATTTTAAAATCGGGTAATCGCGA TGCCTTTGTGGCTCAATTTGCAGAGGTATCTAGCTGGTTTGGTGATTTTGCGCCGCAATTCCAAAGAGAGAGTAGGGCGA TGCTGCAATCAGTCAACGATATGAAAACGGGCTAA
Upstream 100 bases:
>100_bases TCGACTGGAAAACCACAGAAGCGTTATTACGAACGGGAGCCGATGAGTTAGCCTCGGTATTACCGACAAGATTTGATATG CTAAAAGTTGCAAACGGCTG
Downstream 100 bases:
>100_bases TTGAAAGCCAATTTTAAGACTGTACCTAACAGCTGACTCTCATGAGTTAACTGATCTGACAAAAGGCGCTTAGGCGCCTT TTTTGTGTTTGGCCTATTTA
Product: bifunctional chorismate mutase/prephenate dehydrogenase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MEETQMNEKTTAELENLRGLIDGVDQQLLHLLRKRLDLVAQVGAVKHGAGLPIYAPQREANMLAKRREEAKAMNVAPQLI EDILRRLMRESYLNEKDVGFKQIKADLGHVVIVGGEGKLGGLFSQMLTLSGYEVKSLDKDDWANSQAIFDGAGLVIVTVP INITCDLIADKLTNLPENCILADLTSIKGAPVDAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCHGRNPEAYQWLIEQI EIWGARIVEAEPSKHDKAMQLVQAMRHFSSFVYGLNLYKEEADIESLLQFSSPIYRLELAMVGRLFAQSPELYADIIFAQ EESLVAIGDYLDNYSQALSILKSGNRDAFVAQFAEVSSWFGDFAPQFQRESRAMLQSVNDMKTG
Sequences:
>Translated_384_residues MEETQMNEKTTAELENLRGLIDGVDQQLLHLLRKRLDLVAQVGAVKHGAGLPIYAPQREANMLAKRREEAKAMNVAPQLI EDILRRLMRESYLNEKDVGFKQIKADLGHVVIVGGEGKLGGLFSQMLTLSGYEVKSLDKDDWANSQAIFDGAGLVIVTVP INITCDLIADKLTNLPENCILADLTSIKGAPVDAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCHGRNPEAYQWLIEQI EIWGARIVEAEPSKHDKAMQLVQAMRHFSSFVYGLNLYKEEADIESLLQFSSPIYRLELAMVGRLFAQSPELYADIIFAQ EESLVAIGDYLDNYSQALSILKSGNRDAFVAQFAEVSSWFGDFAPQFQRESRAMLQSVNDMKTG >Mature_384_residues MEETQMNEKTTAELENLRGLIDGVDQQLLHLLRKRLDLVAQVGAVKHGAGLPIYAPQREANMLAKRREEAKAMNVAPQLI EDILRRLMRESYLNEKDVGFKQIKADLGHVVIVGGEGKLGGLFSQMLTLSGYEVKSLDKDDWANSQAIFDGAGLVIVTVP INITCDLIADKLTNLPENCILADLTSIKGAPVDAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCHGRNPEAYQWLIEQI EIWGARIVEAEPSKHDKAMQLVQAMRHFSSFVYGLNLYKEEADIESLLQFSSPIYRLELAMVGRLFAQSPELYADIIFAQ EESLVAIGDYLDNYSQALSILKSGNRDAFVAQFAEVSSWFGDFAPQFQRESRAMLQSVNDMKTG
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=372, Percent_Identity=57.258064516129, Blast_Score=438, Evalue=1e-124,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 42491; Mature: 42491
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEETQMNEKTTAELENLRGLIDGVDQQLLHLLRKRLDLVAQVGAVKHGAGLPIYAPQREA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH NMLAKRREEAKAMNVAPQLIEDILRRLMRESYLNEKDVGFKQIKADLGHVVIVGGEGKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCCHH GLFSQMLTLSGYEVKSLDKDDWANSQAIFDGAGLVIVTVPINITCDLIADKLTNLPENCI HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCEEHHHHHHHHHCCCCHHH LADLTSIKGAPVDAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCHGRNPEAYQWLIEQI HHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHH EIWGARIVEAEPSKHDKAMQLVQAMRHFSSFVYGLNLYKEEADIESLLQFSSPIYRLELA HHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MVGRLFAQSPELYADIIFAQEESLVAIGDYLDNYSQALSILKSGNRDAFVAQFAEVSSWF HHHHHHHCCCHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GDFAPQFQRESRAMLQSVNDMKTG HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEETQMNEKTTAELENLRGLIDGVDQQLLHLLRKRLDLVAQVGAVKHGAGLPIYAPQREA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH NMLAKRREEAKAMNVAPQLIEDILRRLMRESYLNEKDVGFKQIKADLGHVVIVGGEGKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCCHH GLFSQMLTLSGYEVKSLDKDDWANSQAIFDGAGLVIVTVPINITCDLIADKLTNLPENCI HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCEEHHHHHHHHHCCCCHHH LADLTSIKGAPVDAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCHGRNPEAYQWLIEQI HHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHH EIWGARIVEAEPSKHDKAMQLVQAMRHFSSFVYGLNLYKEEADIESLLQFSSPIYRLELA HHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MVGRLFAQSPELYADIIFAQEESLVAIGDYLDNYSQALSILKSGNRDAFVAQFAEVSSWF HHHHHHHCCCHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GDFAPQFQRESRAMLQSVNDMKTG HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]