| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960851
Identifier: 157960851
GI number: 157960851
Start: 1247057
End: 1247857
Strand: Direct
Name: 157960851
Synonym: Spea_1023
Alternate gene names: NA
Gene position: 1247057-1247857 (Clockwise)
Preceding gene: 157960850
Following gene: 157960852
Centisome position: 24.1
GC content: 47.69
Gene sequence:
>801_bases GTGGAAAGCTGGCTATATATATTGTGTATCTGCCTAGTTTTAGGTGCAGGGATCGGTTTTATGGCCGGGCTGCTAGGGAT CGGAGGCGGTCTGATTGCGGTTCCTGCATTGCTGCATATCCTCCCACAAATAGGCATTGCGTCAGAAAGCTTACCCCATG TTGCGATAGCGACCTCTTTAGCCGCAATTATTCTAACTTCGCTCTCCTCTGCTCGTGCACACCATAAGCGGCAAAACATT CCTTGGCCCTTATTTAAATCCATGCTGCCCGGCTTTGTGTTAGGGGCAATGTGTTCAGGTTTTATTTCTGAAATGATCCC AGCTAAATCATTGCAGCAAATTTTTGCAATCTTCGTTATCTTGATGGCCGTGCAGATGGCATTCCCGTTTAAAGCTGAAT CTAACCGAGCCATGCCTGGCCCGATAAGCTTATTTTTCGCCGCAACAGGTATTGCGATTATTGCTGCGCTGATGGGGATT GGCGGTGGAGTACTCTTAGTGCCATTTTTAACTTGGTGCGGGCTGCAGATGCGTTATGCTGTCGGTTTTTCGGCGGCAAC AGGATTGTTGATAGCTTCGTTCGGCAGTATTGGTTATACGCTAGCAGGCTGGAATACGTCGAGCTTACCGGAATGGACGC TTGGGTACATCTATTTGCCAGCCTTAATTGGTATCGTTTCAACCTCTATGTTAATGGCTCCTGTTGGCGCTCGGGCCGCA ACTAACTTGCCAACGGCAAAATTGAAGCGTTTTTTTGCGGTTTTCCTTGCCCTTGTTGGCCTTAAACTTGTTTTAGCATA A
Upstream 100 bases:
>100_bases AGGGTCTGGCATCGGTATTAAGTTAAAAGAGCTAATACTCTATGAACTCCGACTTGATTGCTTTAAGCTTGATAAATCAT AACGACTAAAGGTAGTGCTT
Downstream 100 bases:
>100_bases TGTTCTACTGAGCTATTATTGGTAGCATTTCTTCGTTTGACGCTGGGAGTGAGCTCAGCAACTCTTTTTATAGGTAGATA ATCATGAAACAGTATTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MESWLYILCICLVLGAGIGFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSLAAIILTSLSSARAHHKRQNI PWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVILMAVQMAFPFKAESNRAMPGPISLFFAATGIAIIAALMGI GGGVLLVPFLTWCGLQMRYAVGFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGARAA TNLPTAKLKRFFAVFLALVGLKLVLA
Sequences:
>Translated_266_residues MESWLYILCICLVLGAGIGFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSLAAIILTSLSSARAHHKRQNI PWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVILMAVQMAFPFKAESNRAMPGPISLFFAATGIAIIAALMGI GGGVLLVPFLTWCGLQMRYAVGFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGARAA TNLPTAKLKRFFAVFLALVGLKLVLA >Mature_266_residues MESWLYILCICLVLGAGIGFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSLAAIILTSLSSARAHHKRQNI PWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVILMAVQMAFPFKAESNRAMPGPISLFFAATGIAIIAALMGI GGGVLLVPFLTWCGLQMRYAVGFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGARAA TNLPTAKLKRFFAVFLALVGLKLVLA
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27868; Mature: 27868
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESWLYILCICLVLGAGIGFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSL CCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AAIILTSLSSARAHHKRQNIPWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LMAVQMAFPFKAESNRAMPGPISLFFAATGIAIIAALMGIGGGVLLVPFLTWCGLQMRYA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHH VGFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGARAA HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TNLPTAKLKRFFAVFLALVGLKLVLA CCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESWLYILCICLVLGAGIGFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSL CCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AAIILTSLSSARAHHKRQNIPWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LMAVQMAFPFKAESNRAMPGPISLFFAATGIAIIAALMGIGGGVLLVPFLTWCGLQMRYA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHH VGFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGARAA HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TNLPTAKLKRFFAVFLALVGLKLVLA CCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]