| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ptsP [H]
Identifier: 157960850
GI number: 157960850
Start: 1244748
End: 1246982
Strand: Direct
Name: ptsP [H]
Synonym: Spea_1022
Alternate gene names: 157960850
Gene position: 1244748-1246982 (Clockwise)
Preceding gene: 157960849
Following gene: 157960851
Centisome position: 24.06
GC content: 46.4
Gene sequence:
>2235_bases GTGCTCAAAACACTTAGAGATATCACACAAGCAGTAGCTTCAGCTCGCGACCTTCAAAACGCGTTAGAATTGCTGGTTAC GCAAACCAAACAAGCTATGATGACCGAATGTTGCTCTATCTACATTATAGAAGAGCAACACCTTGTTCTCTCAGCGACAG ATGGCCTAGATCCTTCAGCAGTTAATCGCGTCAAACTCCCCATTACTCAAGGCTTAGTTGGACTTGTTGCCCAGCGTGAA GAAGCCATTAACTTAGCCGATGCGGCTTCACATCCTAGATTTAAATTACTCCCTGAAGTCGCCGAAGAAGCCTATAGCGC CTTTCTTGCTGTGCCTATCGTTTATCAAAAATTGGTGATTGGCGTAATTGTTGTTCAGCAAGTTCAAGCGCGGCAATTTA GTGAAGGAGAAGAAGCATTTTTAATGACGCTCGCAGCGCAACTCGCCGTGGCTATCAAAGGACTGACACATAGGGAAAAG TCTGGCGACAGCCTACAGCAGCGTTATTACACAGGTACCCAAGCGTCAAAAGGAATCGCGATAGCTAAGGCGCTGGTGCT GGGCGGGCAGATCTCCTTTGATCTTGTAGAGCACAAAGCCCTGTCAATCGCAGCGGAGTTGCTGCGTCTTCAAGAGGCCA TGAATCGCTGTAAAGACTTATTGGTTGGATTATCGCAGCGCTTTGACAGAGAGAAAGATGAAGAAGCCGCATCTATATTT AATGCCTTGCTACTTTTACTTGAAAAACAAAGCCTAGGCGGCGAGTACATTAAAGATGTTAGATCCGGTTGGTGCGCTGA AACGGCAGTTTGTCGGGTATCAAAACGCTATATAGAACACTTTGAGTCGATGAGTGATCTGTATTTAAGGGAGCGGGCTA GTGATATAAGGGATCTGGGACAAAGAGTGCTTAGGCAGTTGATTGAGCCTAATAAGATTTTTTTAGAGCCTGAAACCCCA GTGATTTTAATTGCTCGTGAAGCAAGTACCACGCTGTTAGCTGAATTTCCAAGACAAAAACTTGCGGGCATAGTGACTGA ATTTGGCGGGGCTAACTCCCATGCCTCCATTCTCGCTCGTGCTATGGGAGTCCCTGCGATAATTGGTGTCGATGGCATCT TAAGCGCCAATGTTGAACAGTCACAGATCATCATTAACGCCAATCGTGGCCAGGTGATTATTGAGCCGACGGCGTTTGTA CTGTCTGAATATCAGAGCTTAATCGCTGCACAAGTCGAGCAGCAGCGCCAGTATGCTCAAGAGTTACCATTTAAAACGGT CACTTCAGATGGTAAGCGAATTTATCTCTATATTAATAGCGGCTTACTCTCCAGTGTAGACTCAGAAACTGGCTGCGACT CAGATGGCATCGGGCTCTACCGTACCGAGATTTTATTTATGCTCAAGCAGTGCTTCCCTGGCGAGATTGAGCAACTTGAG ATCTATAGAAAAGTTCTGAAAGCAGCAGGCGACAAGCCTGTAGTAATGCGCACACTTGATGTGGGTGGAGATAAACCCCT CGACTATTTCCCTATCGTGGAAGACAACCCGTTTCTAGGTTGGCGCGGTATTCGGTTGTCACTGGACCACCCTGAGTTAT TTCTCATTCAGCTTAGAGCCATGTTGCAAGCTGCGATAGGCTCACAGCAGTTACACATACTTCTACCTATGGTCAGTAAC CTTGAAGAGGTGGATTTAGCACTGATTTATTTGGAGCAAGCTTGTCAGGAGTTAACTGCTGAATTAGGTAAACAAATCAC TATGCCAAAAGTGGGCATCATGCTGGAAGTGCCCGTGCTCTTGTATCAGCTCGATGAAGTCTCTAAACGTGTGGATTTTG TCTCTGTGGGCTCGAATGATTTAACTCAATACTTGTTGGCGGTCGATCGTAACAATCCGAGCGTGAGCCCCTTGTTTGAT AGCTATCATCCTGGGGTACTGAGAGCGCTTAAGTTTGCTGTTGAGCGCTGTAACGAGCATAAGCTGCCAATTAGTGTTTG CGGAGAACTGGCAGGCGAACCTCTAGGCGCGATGTTGTTAATTGCCATGGGGTACGAGCAACTGAGTATGAACCAAGCTA GCTTGGCGCGTATTAATTACCTTTTAAGACGGGTTGCCCAAGCTGAGCTGAATCAGTTACTGCATGAGGTATTAAGGCTT AATAGTGGTGAAGAGGTGAGGAACCTAGTGAGCCAATATTGTGAGCAAAAGGGTCTGGCATCGGTATTAAGTTAA
Upstream 100 bases:
>100_bases CATGAAAGAGTTCGCGGTGACCACTTTACCTCTACAGGTTAAAGAGTCGAATAACAGAAGACGAGGTATGCGTAGAAGCT AAATAGGGAGGTTTGCGTTA
Downstream 100 bases:
>100_bases AAGAGCTAATACTCTATGAACTCCGACTTGATTGCTTTAAGCTTGATAAATCATAACGACTAAAGGTAGTGCTTGTGGAA AGCTGGCTATATATATTGTG
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MLKTLRDITQAVASARDLQNALELLVTQTKQAMMTECCSIYIIEEQHLVLSATDGLDPSAVNRVKLPITQGLVGLVAQRE EAINLADAASHPRFKLLPEVAEEAYSAFLAVPIVYQKLVIGVIVVQQVQARQFSEGEEAFLMTLAAQLAVAIKGLTHREK SGDSLQQRYYTGTQASKGIAIAKALVLGGQISFDLVEHKALSIAAELLRLQEAMNRCKDLLVGLSQRFDREKDEEAASIF NALLLLLEKQSLGGEYIKDVRSGWCAETAVCRVSKRYIEHFESMSDLYLRERASDIRDLGQRVLRQLIEPNKIFLEPETP VILIAREASTTLLAEFPRQKLAGIVTEFGGANSHASILARAMGVPAIIGVDGILSANVEQSQIIINANRGQVIIEPTAFV LSEYQSLIAAQVEQQRQYAQELPFKTVTSDGKRIYLYINSGLLSSVDSETGCDSDGIGLYRTEILFMLKQCFPGEIEQLE IYRKVLKAAGDKPVVMRTLDVGGDKPLDYFPIVEDNPFLGWRGIRLSLDHPELFLIQLRAMLQAAIGSQQLHILLPMVSN LEEVDLALIYLEQACQELTAELGKQITMPKVGIMLEVPVLLYQLDEVSKRVDFVSVGSNDLTQYLLAVDRNNPSVSPLFD SYHPGVLRALKFAVERCNEHKLPISVCGELAGEPLGAMLLIAMGYEQLSMNQASLARINYLLRRVAQAELNQLLHEVLRL NSGEEVRNLVSQYCEQKGLASVLS
Sequences:
>Translated_744_residues MLKTLRDITQAVASARDLQNALELLVTQTKQAMMTECCSIYIIEEQHLVLSATDGLDPSAVNRVKLPITQGLVGLVAQRE EAINLADAASHPRFKLLPEVAEEAYSAFLAVPIVYQKLVIGVIVVQQVQARQFSEGEEAFLMTLAAQLAVAIKGLTHREK SGDSLQQRYYTGTQASKGIAIAKALVLGGQISFDLVEHKALSIAAELLRLQEAMNRCKDLLVGLSQRFDREKDEEAASIF NALLLLLEKQSLGGEYIKDVRSGWCAETAVCRVSKRYIEHFESMSDLYLRERASDIRDLGQRVLRQLIEPNKIFLEPETP VILIAREASTTLLAEFPRQKLAGIVTEFGGANSHASILARAMGVPAIIGVDGILSANVEQSQIIINANRGQVIIEPTAFV LSEYQSLIAAQVEQQRQYAQELPFKTVTSDGKRIYLYINSGLLSSVDSETGCDSDGIGLYRTEILFMLKQCFPGEIEQLE IYRKVLKAAGDKPVVMRTLDVGGDKPLDYFPIVEDNPFLGWRGIRLSLDHPELFLIQLRAMLQAAIGSQQLHILLPMVSN LEEVDLALIYLEQACQELTAELGKQITMPKVGIMLEVPVLLYQLDEVSKRVDFVSVGSNDLTQYLLAVDRNNPSVSPLFD SYHPGVLRALKFAVERCNEHKLPISVCGELAGEPLGAMLLIAMGYEQLSMNQASLARINYLLRRVAQAELNQLLHEVLRL NSGEEVRNLVSQYCEQKGLASVLS >Mature_744_residues MLKTLRDITQAVASARDLQNALELLVTQTKQAMMTECCSIYIIEEQHLVLSATDGLDPSAVNRVKLPITQGLVGLVAQRE EAINLADAASHPRFKLLPEVAEEAYSAFLAVPIVYQKLVIGVIVVQQVQARQFSEGEEAFLMTLAAQLAVAIKGLTHREK SGDSLQQRYYTGTQASKGIAIAKALVLGGQISFDLVEHKALSIAAELLRLQEAMNRCKDLLVGLSQRFDREKDEEAASIF NALLLLLEKQSLGGEYIKDVRSGWCAETAVCRVSKRYIEHFESMSDLYLRERASDIRDLGQRVLRQLIEPNKIFLEPETP VILIAREASTTLLAEFPRQKLAGIVTEFGGANSHASILARAMGVPAIIGVDGILSANVEQSQIIINANRGQVIIEPTAFV LSEYQSLIAAQVEQQRQYAQELPFKTVTSDGKRIYLYINSGLLSSVDSETGCDSDGIGLYRTEILFMLKQCFPGEIEQLE IYRKVLKAAGDKPVVMRTLDVGGDKPLDYFPIVEDNPFLGWRGIRLSLDHPELFLIQLRAMLQAAIGSQQLHILLPMVSN LEEVDLALIYLEQACQELTAELGKQITMPKVGIMLEVPVLLYQLDEVSKRVDFVSVGSNDLTQYLLAVDRNNPSVSPLFD SYHPGVLRALKFAVERCNEHKLPISVCGELAGEPLGAMLLIAMGYEQLSMNQASLARINYLLRRVAQAELNQLLHEVLRL NSGEEVRNLVSQYCEQKGLASVLS
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=750, Percent_Identity=42.8, Blast_Score=568, Evalue=1e-163, Organism=Escherichia coli, GI1788756, Length=576, Percent_Identity=33.8541666666667, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI48994992, Length=511, Percent_Identity=34.4422700587084, Blast_Score=280, Evalue=3e-76, Organism=Escherichia coli, GI1788726, Length=524, Percent_Identity=33.7786259541985, Blast_Score=264, Evalue=1e-71, Organism=Escherichia coli, GI1787994, Length=404, Percent_Identity=24.2574257425743, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 82332; Mature: 82332
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLRDITQAVASARDLQNALELLVTQTKQAMMTECCSIYIIEEQHLVLSATDGLDPSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCHHH VNRVKLPITQGLVGLVAQREEAINLADAASHPRFKLLPEVAEEAYSAFLAVPIVYQKLVI CCEEECCHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIVVQQVQARQFSEGEEAFLMTLAAQLAVAIKGLTHREKSGDSLQQRYYTGTQASKGIA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHH IAKALVLGGQISFDLVEHKALSIAAELLRLQEAMNRCKDLLVGLSQRFDREKDEEAASIF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH NALLLLLEKQSLGGEYIKDVRSGWCAETAVCRVSKRYIEHFESMSDLYLRERASDIRDLG HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRVLRQLIEPNKIFLEPETPVILIAREASTTLLAEFPRQKLAGIVTEFGGANSHASILAR HHHHHHHCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AMGVPAIIGVDGILSANVEQSQIIINANRGQVIIEPTAFVLSEYQSLIAAQVEQQRQYAQ HHCCCEEECCCCHHCCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ELPFKTVTSDGKRIYLYINSGLLSSVDSETGCDSDGIGLYRTEILFMLKQCFPGEIEQLE HCCCEEECCCCCEEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH IYRKVLKAAGDKPVVMRTLDVGGDKPLDYFPIVEDNPFLGWRGIRLSLDHPELFLIQLRA HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH MLQAAIGSQQLHILLPMVSNLEEVDLALIYLEQACQELTAELGKQITMPKVGIMLEVPVL HHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHH LYQLDEVSKRVDFVSVGSNDLTQYLLAVDRNNPSVSPLFDSYHPGVLRALKFAVERCNEH HHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCC KLPISVCGELAGEPLGAMLLIAMGYEQLSMNQASLARINYLLRRVAQAELNQLLHEVLRL CCCHHHHHHHHCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NSGEEVRNLVSQYCEQKGLASVLS CCCHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MLKTLRDITQAVASARDLQNALELLVTQTKQAMMTECCSIYIIEEQHLVLSATDGLDPSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCHHH VNRVKLPITQGLVGLVAQREEAINLADAASHPRFKLLPEVAEEAYSAFLAVPIVYQKLVI CCEEECCHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIVVQQVQARQFSEGEEAFLMTLAAQLAVAIKGLTHREKSGDSLQQRYYTGTQASKGIA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHH IAKALVLGGQISFDLVEHKALSIAAELLRLQEAMNRCKDLLVGLSQRFDREKDEEAASIF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH NALLLLLEKQSLGGEYIKDVRSGWCAETAVCRVSKRYIEHFESMSDLYLRERASDIRDLG HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRVLRQLIEPNKIFLEPETPVILIAREASTTLLAEFPRQKLAGIVTEFGGANSHASILAR HHHHHHHCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AMGVPAIIGVDGILSANVEQSQIIINANRGQVIIEPTAFVLSEYQSLIAAQVEQQRQYAQ HHCCCEEECCCCHHCCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ELPFKTVTSDGKRIYLYINSGLLSSVDSETGCDSDGIGLYRTEILFMLKQCFPGEIEQLE HCCCEEECCCCCEEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH IYRKVLKAAGDKPVVMRTLDVGGDKPLDYFPIVEDNPFLGWRGIRLSLDHPELFLIQLRA HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH MLQAAIGSQQLHILLPMVSNLEEVDLALIYLEQACQELTAELGKQITMPKVGIMLEVPVL HHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHH LYQLDEVSKRVDFVSVGSNDLTQYLLAVDRNNPSVSPLFDSYHPGVLRALKFAVERCNEH HHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCC KLPISVCGELAGEPLGAMLLIAMGYEQLSMNQASLARINYLLRRVAQAELNQLLHEVLRL CCCHHHHHHHHCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NSGEEVRNLVSQYCEQKGLASVLS CCCHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]