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The map label for this gene is ygeA [H]

Identifier: 157960769

GI number: 157960769

Start: 1148796

End: 1149488

Strand: Direct

Name: ygeA [H]

Synonym: Spea_0941

Alternate gene names: 157960769

Gene position: 1148796-1149488 (Clockwise)

Preceding gene: 157960768

Following gene: 157960771

Centisome position: 22.2

GC content: 45.74

Gene sequence:

>693_bases
ATGAAAACAATAGGTATGTTAGGCGGCATGAGCTGGGAGTCTACTGCAAGTTACTATAAGGCTGTCAATGAAGGAGTAAA
GGCAAGGCTCGGTGGTCTGCACTCTGCAAAAGTGTGTCTCTATAGTGTCGATTTTGAACAAATAGAAAGACTGCAGCATG
CTGGAAAGTGGCAAGAGACGGCGGAGATATTGTCTGATGCGGCTAAAAATGTTGCAGCTGGCGGCGCTGATTTTTTACTC
ATTTGTACGAATACAATGCATAAGGTGGCGGATGAGATCCAGGCTCAGCTCTCAATTCCTATTTTACATATAGCCGATGC
AACTGCAGCAAAGCTGGTGGCTAATGGGGTGACTAGAGTGGGCCTGTTGGGGACGCGATTCACCATGGAGCAAGATTTCT
ATAAAAGTCGGCTGATAAACCAATTCGGTATAGAAGTGATAGTTCCAAATGAAGCGGAGCGCAATCTTGTGCATCAGGTT
ATTTATGAGGAGTTATGCCAAGGGGTGGTTAACTCCACTTCAAAGCAGCAATATCTGGATATCGTTAATGCCTTACATGC
ACAAGGAGCCCAAGCGGTCATTCTGGGGTGTACCGAGATTGCATTATTGGTTGGGCAACAAGATACCCAAGTGCCTCTCT
ATGATACGACAGCGATCCACTGTGAATATGCGGTCGAGATGGCATTAAGTTAA

Upstream 100 bases:

>100_bases
TAGCCTTCAGGCAAGCAAAGCTGATAATAGATAGTTACTCTTGAGTTAAATACAGATTGAAAATTCCTAGAAATGACTAA
TAAATATAGGGCTGCAAAAA

Downstream 100 bases:

>100_bases
GAAGTTACCCAGAGATAATGCGATGACTTCGAAAGGTAAGAAGAGGCCATGAAAGACCTGAAGAATACGAAGAAAAGCTA
ACCTGATATTTTCTTTTCTT

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKTIGMLGGMSWESTASYYKAVNEGVKARLGGLHSAKVCLYSVDFEQIERLQHAGKWQETAEILSDAAKNVAAGGADFLL
ICTNTMHKVADEIQAQLSIPILHIADATAAKLVANGVTRVGLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQV
IYEELCQGVVNSTSKQQYLDIVNALHAQGAQAVILGCTEIALLVGQQDTQVPLYDTTAIHCEYAVEMALS

Sequences:

>Translated_230_residues
MKTIGMLGGMSWESTASYYKAVNEGVKARLGGLHSAKVCLYSVDFEQIERLQHAGKWQETAEILSDAAKNVAAGGADFLL
ICTNTMHKVADEIQAQLSIPILHIADATAAKLVANGVTRVGLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQV
IYEELCQGVVNSTSKQQYLDIVNALHAQGAQAVILGCTEIALLVGQQDTQVPLYDTTAIHCEYAVEMALS
>Mature_230_residues
MKTIGMLGGMSWESTASYYKAVNEGVKARLGGLHSAKVCLYSVDFEQIERLQHAGKWQETAEILSDAAKNVAAGGADFLL
ICTNTMHKVADEIQAQLSIPILHIADATAAKLVANGVTRVGLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQV
IYEELCQGVVNSTSKQQYLDIVNALHAQGAQAVILGCTEIALLVGQQDTQVPLYDTTAIHCEYAVEMALS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=53.4782608695652, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 25042; Mature: 25042

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGMLGGMSWESTASYYKAVNEGVKARLGGLHSAKVCLYSVDFEQIERLQHAGKWQET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHCCCHHHH
AEILSDAAKNVAAGGADFLLICTNTMHKVADEIQAQLSIPILHIADATAAKLVANGVTRV
HHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCHHHH
GLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQVIYEELCQGVVNSTSKQQYLD
HHHCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IVNALHAQGAQAVILGCTEIALLVGQQDTQVPLYDTTAIHCEYAVEMALS
HHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKTIGMLGGMSWESTASYYKAVNEGVKARLGGLHSAKVCLYSVDFEQIERLQHAGKWQET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHCCCHHHH
AEILSDAAKNVAAGGADFLLICTNTMHKVADEIQAQLSIPILHIADATAAKLVANGVTRV
HHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCHHHH
GLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQVIYEELCQGVVNSTSKQQYLD
HHHCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IVNALHAQGAQAVILGCTEIALLVGQQDTQVPLYDTTAIHCEYAVEMALS
HHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]