| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ygjG [C]
Identifier: 157960764
GI number: 157960764
Start: 1142961
End: 1144301
Strand: Reverse
Name: ygjG [C]
Synonym: Spea_0936
Alternate gene names: 157960764
Gene position: 1144301-1142961 (Counterclockwise)
Preceding gene: 157960770
Following gene: 157960763
Centisome position: 22.11
GC content: 49.74
Gene sequence:
>1341_bases ATGGCAGATCCACAGATGCACAATCAAAGCGATGCGCAATCATTAGAACATTACTGGATGCCGTTTACGGCAAATAGGCA GTTTAAGTCGAGCCCGAGAATGCTCGCCCATGCCGAAGGTATGTACTATAAAGATGTCGCAGGTCGCCCCATATTAGACG GTACAGCAGGTTTGTGGTGCTGTAACGCCGGACACGGACGTAAAGAGATCTCTGAAGCGGTCAGCAAACAGATCCACGAA ATGGACTACGCGCCCTCTTTTCAGATGGGTCATCCTTTAGCCTTTGAGCTAGCCGAGCGTTTAGCCCAAATCAGTCCTAA AGGGCTAAATAAAGCCTTCTTCACTAATTCAGGTTCAGAATCTGTCGACAGCGCACTAAAAATCGCCCTTACCTATCACC GCGCTAATGGTGAAGCGACTCGCACCCGTTTTATTGGTCGCGAACTGGGTTATCACGGTGTTGGCTTTGGCGGCATTTCT GTTGGTGGTATCGGTAATAACCGTAAGACCTTTAACCAGCAGTTGCTACAAGGTGTTGACCACCTCCCCCATACATTAGA CATGAAAGGCAATGCCTTTTGTCGCGGCATGCCAAAAACAGGCGCCGAGAAAGCCGAAGTACTCGAGCAACTGGTTGCCC TGCACGGCGCAGAAAACATCGCCGCCGTAATAGTCGAGCCGATGTCTGGCTCGGCAGGGGTTATCTTGCCGCCAGAAGGC TACCTGCAAAAGCTTCGCGAGATCACCAAAAAGCACGGCATCCTACTTATTTTTGATGAAGTGATTACAGCATTTGGTCG TGTTGGCGACGCCTTTGCCAGTCAGCGTTGGGGCGTAGTACCCGATATGATCACCACGGCAAAAGCACTCAATAATGGCG CAATCCCAATGGGCGCAGTACTGGTTGACGATAATATCTATGATACCTGTATGCAGGGGCCTGAAAACGCTATCGAGCTG TTTCATGGCTACACCTATTCCGGCCACCCAGTAGCCGCAGCGGCAGCACTTGCCACTCTCAATATCTATGAAAATGAAAA GCTGTTCGATCGTACTAAAGAGCTTGAAGGCTACTTCGAAGATGCAGTACACAGCCTAAAAGGCTTACCGAACGTGATTG ATATTCGCAACACAGGCCTTGTTGGCGGCATTCAATTTGCTCCTAGCGAAAAGGGCGTGGGTAAGCGCGGCTTCGGGATA TTCGAGCACTGTTTCGAAGCTGGCACCTTAGTGCGTGCTACCGGTGACATTATCGCGATTTCACCACCGTTAATTGTCGA CAAACAGCAAATAGATCAGATCGTTAATACCCTTAGCGATGCGATTAAAGCTGTCGGTTAA
Upstream 100 bases:
>100_bases TTCATGTTCATTATTTCTGACATAGCATGGAATATATCGACCGCTTGCCTAAAAAAGCAACAGATAAAAACAATAATTAA ACTGAATCAAGGTAGATGAT
Downstream 100 bases:
>100_bases TCTCTGTACCCATTGCATTTCCACCCGAGATAGCAGCGTTAATGCAATGGGCAAAACCATTACTTATAAACACAATTTGC TCCCTTTGGGGAGTGATCAT
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MADPQMHNQSDAQSLEHYWMPFTANRQFKSSPRMLAHAEGMYYKDVAGRPILDGTAGLWCCNAGHGRKEISEAVSKQIHE MDYAPSFQMGHPLAFELAERLAQISPKGLNKAFFTNSGSESVDSALKIALTYHRANGEATRTRFIGRELGYHGVGFGGIS VGGIGNNRKTFNQQLLQGVDHLPHTLDMKGNAFCRGMPKTGAEKAEVLEQLVALHGAENIAAVIVEPMSGSAGVILPPEG YLQKLREITKKHGILLIFDEVITAFGRVGDAFASQRWGVVPDMITTAKALNNGAIPMGAVLVDDNIYDTCMQGPENAIEL FHGYTYSGHPVAAAAALATLNIYENEKLFDRTKELEGYFEDAVHSLKGLPNVIDIRNTGLVGGIQFAPSEKGVGKRGFGI FEHCFEAGTLVRATGDIIAISPPLIVDKQQIDQIVNTLSDAIKAVG
Sequences:
>Translated_446_residues MADPQMHNQSDAQSLEHYWMPFTANRQFKSSPRMLAHAEGMYYKDVAGRPILDGTAGLWCCNAGHGRKEISEAVSKQIHE MDYAPSFQMGHPLAFELAERLAQISPKGLNKAFFTNSGSESVDSALKIALTYHRANGEATRTRFIGRELGYHGVGFGGIS VGGIGNNRKTFNQQLLQGVDHLPHTLDMKGNAFCRGMPKTGAEKAEVLEQLVALHGAENIAAVIVEPMSGSAGVILPPEG YLQKLREITKKHGILLIFDEVITAFGRVGDAFASQRWGVVPDMITTAKALNNGAIPMGAVLVDDNIYDTCMQGPENAIEL FHGYTYSGHPVAAAAALATLNIYENEKLFDRTKELEGYFEDAVHSLKGLPNVIDIRNTGLVGGIQFAPSEKGVGKRGFGI FEHCFEAGTLVRATGDIIAISPPLIVDKQQIDQIVNTLSDAIKAVG >Mature_445_residues ADPQMHNQSDAQSLEHYWMPFTANRQFKSSPRMLAHAEGMYYKDVAGRPILDGTAGLWCCNAGHGRKEISEAVSKQIHEM DYAPSFQMGHPLAFELAERLAQISPKGLNKAFFTNSGSESVDSALKIALTYHRANGEATRTRFIGRELGYHGVGFGGISV GGIGNNRKTFNQQLLQGVDHLPHTLDMKGNAFCRGMPKTGAEKAEVLEQLVALHGAENIAAVIVEPMSGSAGVILPPEGY LQKLREITKKHGILLIFDEVITAFGRVGDAFASQRWGVVPDMITTAKALNNGAIPMGAVLVDDNIYDTCMQGPENAIELF HGYTYSGHPVAAAAALATLNIYENEKLFDRTKELEGYFEDAVHSLKGLPNVIDIRNTGLVGGIQFAPSEKGVGKRGFGIF EHCFEAGTLVRATGDIIAISPPLIVDKQQIDQIVNTLSDAIKAVG
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=429, Percent_Identity=26.5734265734266, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI37574042, Length=458, Percent_Identity=27.5109170305677, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI226442705, Length=458, Percent_Identity=27.7292576419214, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI13994255, Length=440, Percent_Identity=27.2727272727273, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI226442709, Length=399, Percent_Identity=28.8220551378446, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI284507298, Length=230, Percent_Identity=32.1739130434783, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI24119277, Length=446, Percent_Identity=25.3363228699552, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI145693181, Length=406, Percent_Identity=31.7733990147783, Blast_Score=185, Evalue=6e-48, Organism=Escherichia coli, GI1786991, Length=433, Percent_Identity=30.4849884526559, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI1788044, Length=418, Percent_Identity=26.555023923445, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1789759, Length=409, Percent_Identity=28.6063569682152, Blast_Score=134, Evalue=9e-33, Organism=Escherichia coli, GI1787560, Length=434, Percent_Identity=26.7281105990783, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1789016, Length=423, Percent_Identity=25.7683215130024, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1786349, Length=379, Percent_Identity=28.2321899736148, Blast_Score=96, Evalue=6e-21, Organism=Caenorhabditis elegans, GI32564660, Length=440, Percent_Identity=29.3181818181818, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI25144271, Length=432, Percent_Identity=28.7037037037037, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI25144274, Length=266, Percent_Identity=34.2105263157895, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71992977, Length=438, Percent_Identity=26.027397260274, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17541228, Length=107, Percent_Identity=39.2523364485981, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323470, Length=440, Percent_Identity=26.5909090909091, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324386, Length=469, Percent_Identity=24.5202558635394, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324432, Length=414, Percent_Identity=24.1545893719807, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI161085790, Length=465, Percent_Identity=27.3118279569892, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI21357415, Length=418, Percent_Identity=26.555023923445, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI28574759, Length=464, Percent_Identity=27.3706896551724, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI21356575, Length=435, Percent_Identity=27.1264367816092, Blast_Score=119, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48279; Mature: 48147
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPQMHNQSDAQSLEHYWMPFTANRQFKSSPRMLAHAEGMYYKDVAGRPILDGTAGLWC CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCEEE CNAGHGRKEISEAVSKQIHEMDYAPSFQMGHPLAFELAERLAQISPKGLNKAFFTNSGSE ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEECCCCCH SVDSALKIALTYHRANGEATRTRFIGRELGYHGVGFGGISVGGIGNNRKTFNQQLLQGVD HHHHHHEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH HLPHTLDMKGNAFCRGMPKTGAEKAEVLEQLVALHGAENIAAVIVEPMSGSAGVILPPEG HCCCEECCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCHH YLQKLREITKKHGILLIFDEVITAFGRVGDAFASQRWGVVPDMITTAKALNNGAIPMGAV HHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEE LVDDNIYDTCMQGPENAIELFHGYTYSGHPVAAAAALATLNIYENEKLFDRTKELEGYFE EECCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DAVHSLKGLPNVIDIRNTGLVGGIQFAPSEKGVGKRGFGIFEHCFEAGTLVRATGDIIAI HHHHHHHCCCCEEEECCCCCEECEEECCCCCCCCCCCCHHHHHHHHCCCEEEECCCEEEE SPPLIVDKQQIDQIVNTLSDAIKAVG CCCCEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADPQMHNQSDAQSLEHYWMPFTANRQFKSSPRMLAHAEGMYYKDVAGRPILDGTAGLWC CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCEEE CNAGHGRKEISEAVSKQIHEMDYAPSFQMGHPLAFELAERLAQISPKGLNKAFFTNSGSE ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEECCCCCH SVDSALKIALTYHRANGEATRTRFIGRELGYHGVGFGGISVGGIGNNRKTFNQQLLQGVD HHHHHHEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH HLPHTLDMKGNAFCRGMPKTGAEKAEVLEQLVALHGAENIAAVIVEPMSGSAGVILPPEG HCCCEECCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCHH YLQKLREITKKHGILLIFDEVITAFGRVGDAFASQRWGVVPDMITTAKALNNGAIPMGAV HHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEE LVDDNIYDTCMQGPENAIELFHGYTYSGHPVAAAAALATLNIYENEKLFDRTKELEGYFE EECCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DAVHSLKGLPNVIDIRNTGLVGGIQFAPSEKGVGKRGFGIFEHCFEAGTLVRATGDIIAI HHHHHHHCCCCEEEECCCCCEECEEECCCCCCCCCCCCHHHHHHHHCCCEEEECCCEEEE SPPLIVDKQQIDQIVNTLSDAIKAVG CCCCEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]