| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960757
Identifier: 157960757
GI number: 157960757
Start: 1137456
End: 1137956
Strand: Reverse
Name: 157960757
Synonym: Spea_0929
Alternate gene names: NA
Gene position: 1137956-1137456 (Counterclockwise)
Preceding gene: 157960759
Following gene: 157960756
Centisome position: 21.99
GC content: 46.31
Gene sequence:
>501_bases ATGATGAGCGATCTAAATACTAATAATAAGCCCACCAAAGTCATGTCACTCTATAACCGTGTCACTCGATTGCCATTTGG TCACAAGATTTTCTCACTTATGGTGAGCCGCATGGCGCCTTACTTCGGTACAGTAAAACCCATCATAAGTGAATTAAATG TGAATCGCTGTGTCTGCCAGATAAAGAAACGCAAGGCGGTGCACAATCATATTCAGACGGTACATGTGATTGCTATCTGT AACGGACTAGAGATGGCGATGGGCGTAATGGCTGAAGCATCTATTCCTCATCACTTAAGGTGGATCCCTAAAGGGATGAG CGTAGACTACACCGCCAAAGCTGGCAGTGATATAACCTGTATTGCCGAAGTTGAGCCTGAACAGTGGGTGCCCGGTGACA TGCTAGTGCCCGTTACCGCCTATGACACCGATGGAGTAGTGGTTGTACGAGGCACGATTAAACTGTGGATTTCAGAAAAA CCCGCCAAGAAACCATCTTAG
Upstream 100 bases:
>100_bases AGTTTACTTTTATAAAGCTAAATTAACCTTCGGCTAGCATTTTATGTTAATTCGATGTTAATCTCATCCGACCAGTAAAG CATATTAAAATGGACAAGCA
Downstream 100 bases:
>100_bases AAACGAGCACAATAATGGCCGACAAAATTATCGTTTGTCGGTCAGTGTTTTCCTGCTATTATTTCCAAAACTACCGAAAC ATATTTTTCTTTGCGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily Protein
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MMSDLNTNNKPTKVMSLYNRVTRLPFGHKIFSLMVSRMAPYFGTVKPIISELNVNRCVCQIKKRKAVHNHIQTVHVIAIC NGLEMAMGVMAEASIPHHLRWIPKGMSVDYTAKAGSDITCIAEVEPEQWVPGDMLVPVTAYDTDGVVVVRGTIKLWISEK PAKKPS
Sequences:
>Translated_166_residues MMSDLNTNNKPTKVMSLYNRVTRLPFGHKIFSLMVSRMAPYFGTVKPIISELNVNRCVCQIKKRKAVHNHIQTVHVIAIC NGLEMAMGVMAEASIPHHLRWIPKGMSVDYTAKAGSDITCIAEVEPEQWVPGDMLVPVTAYDTDGVVVVRGTIKLWISEK PAKKPS >Mature_166_residues MMSDLNTNNKPTKVMSLYNRVTRLPFGHKIFSLMVSRMAPYFGTVKPIISELNVNRCVCQIKKRKAVHNHIQTVHVIAIC NGLEMAMGVMAEASIPHHLRWIPKGMSVDYTAKAGSDITCIAEVEPEQWVPGDMLVPVTAYDTDGVVVVRGTIKLWISEK PAKKPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18488; Mature: 18488
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDLNTNNKPTKVMSLYNRVTRLPFGHKIFSLMVSRMAPYFGTVKPIISELNVNRCVCQ CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHH IKKRKAVHNHIQTVHVIAICNGLEMAMGVMAEASIPHHLRWIPKGMSVDYTAKAGSDITC HHHHHHHHHHHHHEEEEEHHCCHHHHHHHHHHCCCCHHEEECCCCCCEEEECCCCCCEEE IAEVEPEQWVPGDMLVPVTAYDTDGVVVVRGTIKLWISEKPAKKPS EEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MMSDLNTNNKPTKVMSLYNRVTRLPFGHKIFSLMVSRMAPYFGTVKPIISELNVNRCVCQ CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHH IKKRKAVHNHIQTVHVIAICNGLEMAMGVMAEASIPHHLRWIPKGMSVDYTAKAGSDITC HHHHHHHHHHHHHEEEEEHHCCHHHHHHHHHHCCCCHHEEECCCCCCEEEECCCCCCEEE IAEVEPEQWVPGDMLVPVTAYDTDGVVVVRGTIKLWISEKPAKKPS EEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA