| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960604
Identifier: 157960604
GI number: 157960604
Start: 962027
End: 962440
Strand: Reverse
Name: 157960604
Synonym: Spea_0776
Alternate gene names: NA
Gene position: 962440-962027 (Counterclockwise)
Preceding gene: 157960606
Following gene: 157960601
Centisome position: 18.6
GC content: 43.0
Gene sequence:
>414_bases ATGATAAAACAATCCTTCATCCTAGCAAGTTTGCTATTGGGTTTAACTGCTTGTCAGTCGTCTCCTCAAACTCAAGTAGA AGATTTAACCATTGAAGGCACTTGGCATATTGAGTCAGCTAATGGCCAACCTGTCATCGATTACAGCCCCGCAGAATTAA TCTTTGCAGCCGACGGTAAGCTAACTGGTAACAATAGCTGCAATAACTTTTTCGGTAATTACGTACTCGCCGGCCAATCT CTACAGCTACAGCCTGCAGGTAGCACTATGAAAGCCTGTGTTGATGCACTGATGGCACAAGAGCAACGCGTTATGCAAGT AATGCCCGAAGTGACCCAAGCTCAAATGGCGAAAGGTAAATTGGTATTGAAAGATGCTGATAACAAAACCGTTTTGGTAC TAAGCAAAAAGTAA
Upstream 100 bases:
>100_bases GTTTAATTACACTTTTTTGCACTATTTGCCGCCTTCTTTGTGGTGATTTTAGTATAAACTACTCACAGTATATCGATATT AACTACTATGGATCCCGAAC
Downstream 100 bases:
>100_bases TCGCTTAGCTAGTTCTGCATTAGCTGTTTTAGCGGACATAAATGTTCCAGACATAACGTCGACTTACGGTGCTGAGAAAG CCATCCTTAGCAAGTCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MIKQSFILASLLLGLTACQSSPQTQVEDLTIEGTWHIESANGQPVIDYSPAELIFAADGKLTGNNSCNNFFGNYVLAGQS LQLQPAGSTMKACVDALMAQEQRVMQVMPEVTQAQMAKGKLVLKDADNKTVLVLSKK
Sequences:
>Translated_137_residues MIKQSFILASLLLGLTACQSSPQTQVEDLTIEGTWHIESANGQPVIDYSPAELIFAADGKLTGNNSCNNFFGNYVLAGQS LQLQPAGSTMKACVDALMAQEQRVMQVMPEVTQAQMAKGKLVLKDADNKTVLVLSKK >Mature_137_residues MIKQSFILASLLLGLTACQSSPQTQVEDLTIEGTWHIESANGQPVIDYSPAELIFAADGKLTGNNSCNNFFGNYVLAGQS LQLQPAGSTMKACVDALMAQEQRVMQVMPEVTQAQMAKGKLVLKDADNKTVLVLSKK
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14747; Mature: 14747
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQSFILASLLLGLTACQSSPQTQVEDLTIEGTWHIESANGQPVIDYSPAELIFAADGK CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCEEEEECCCE LTGNNSCNNFFGNYVLAGQSLQLQPAGSTMKACVDALMAQEQRVMQVMPEVTQAQMAKGK ECCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LVLKDADNKTVLVLSKK EEEEECCCCEEEEEECC >Mature Secondary Structure MIKQSFILASLLLGLTACQSSPQTQVEDLTIEGTWHIESANGQPVIDYSPAELIFAADGK CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCEEEEECCCE LTGNNSCNNFFGNYVLAGQSLQLQPAGSTMKACVDALMAQEQRVMQVMPEVTQAQMAKGK ECCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LVLKDADNKTVLVLSKK EEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA