| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960538
Identifier: 157960538
GI number: 157960538
Start: 873114
End: 874025
Strand: Reverse
Name: 157960538
Synonym: Spea_0710
Alternate gene names: NA
Gene position: 874025-873114 (Counterclockwise)
Preceding gene: 157960539
Following gene: 157960537
Centisome position: 16.89
GC content: 41.12
Gene sequence:
>912_bases ATGGGCAACTCACCACTGGCAATTAGGCTTTTGCAGACTGAAATATGCCTTGGTAACTGTCATGCCAAATCTATGAAAAT ATCACTATTATCACCAATAAAAACAATGCTAAATTGCAGTTACCGTTTGTTATATCCGTATCAGAGTAGTCGATTAATGA ATGCACAAATTAAAGTACTAGCGGCAGGCTTGTTATGCCTCAATCTCAGTGGTTGTGAATATATCGAGAACATTTTACAC CCAGATGATGGCAACGATGAGGTGATAGTTGACGATAACTTCAGAACTCACGCCCTGCAACTGGGCTTATCTGAAGCCAG CATCATACGTTTATGTACTGCTACAGATGAGATCCGCGCAAACTGCATTAGCAAATTTAACGATAAAACAAATCAACAAG AAGTGAGAGTTGAATATACTTTCAATGATGTGATCCACAAAAATAACTACGCCAAAAGCACTAGCGCAAGTCGGGTTATT TTTCAGCTACCAGCAGACAACGCCACAGCCGTTATAACGTTTGAAAACAGCCGAACTTATCAGTTCAACGATGACTATCA GTACACTTGGCAAGATCCTACTGGTTTTGCGGCTGCCGATATCGCCAATGATGCTAACGAGTCAATTGCAAAACTTGAAA ATTTATCGGTAACGACTCGCTTATCCGACTCGAAACTATCCAATATATCAACCGCATCAATGAGTAACAATGATTACTCC TTGACTGGCGCACAAGACTTAATGAATGCAGCCAGCACCATGTTATTCCCTGAGTTAATCGTCAATGTAACCAGTAGTAA TTTAACCGAGCCTGCCGATGCCTCATTTGCAATGTTTACTGCAGGTCATCGCGCTATCTTTACTGCTTACTCTGATGCTT TTGCAACCGCGATTGAAGAAAGCTGGTTTTAG
Upstream 100 bases:
>100_bases ACCCCAGAACTCAAGCTCGATACCCATATCGACGGCATTACAGGTGCAACACTTTCAGTTAGAGCACTGACAAAACTTTC ACGCATCGCTCTGTATTTGG
Downstream 100 bases:
>100_bases CTAGATAAGTACAAGGTGAAGACCGCCATTGGCAGCAGCGACTACCAGCTCGCTGCTAACGGCTCCATGACCCACAGTTA GACATCTCTTGCAGTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGNSPLAIRLLQTEICLGNCHAKSMKISLLSPIKTMLNCSYRLLYPYQSSRLMNAQIKVLAAGLLCLNLSGCEYIENILH PDDGNDEVIVDDNFRTHALQLGLSEASIIRLCTATDEIRANCISKFNDKTNQQEVRVEYTFNDVIHKNNYAKSTSASRVI FQLPADNATAVITFENSRTYQFNDDYQYTWQDPTGFAAADIANDANESIAKLENLSVTTRLSDSKLSNISTASMSNNDYS LTGAQDLMNAASTMLFPELIVNVTSSNLTEPADASFAMFTAGHRAIFTAYSDAFATAIEESWF
Sequences:
>Translated_303_residues MGNSPLAIRLLQTEICLGNCHAKSMKISLLSPIKTMLNCSYRLLYPYQSSRLMNAQIKVLAAGLLCLNLSGCEYIENILH PDDGNDEVIVDDNFRTHALQLGLSEASIIRLCTATDEIRANCISKFNDKTNQQEVRVEYTFNDVIHKNNYAKSTSASRVI FQLPADNATAVITFENSRTYQFNDDYQYTWQDPTGFAAADIANDANESIAKLENLSVTTRLSDSKLSNISTASMSNNDYS LTGAQDLMNAASTMLFPELIVNVTSSNLTEPADASFAMFTAGHRAIFTAYSDAFATAIEESWF >Mature_302_residues GNSPLAIRLLQTEICLGNCHAKSMKISLLSPIKTMLNCSYRLLYPYQSSRLMNAQIKVLAAGLLCLNLSGCEYIENILHP DDGNDEVIVDDNFRTHALQLGLSEASIIRLCTATDEIRANCISKFNDKTNQQEVRVEYTFNDVIHKNNYAKSTSASRVIF QLPADNATAVITFENSRTYQFNDDYQYTWQDPTGFAAADIANDANESIAKLENLSVTTRLSDSKLSNISTASMSNNDYSL TGAQDLMNAASTMLFPELIVNVTSSNLTEPADASFAMFTAGHRAIFTAYSDAFATAIEESWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33491; Mature: 33360
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSPLAIRLLQTEICLGNCHAKSMKISLLSPIKTMLNCSYRLLYPYQSSRLMNAQIKVL CCCCCEEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCEEEHHHHHHE AAGLLCLNLSGCEYIENILHPDDGNDEVIVDDNFRTHALQLGLSEASIIRLCTATDEIRA EEEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEECCCHHHHH NCISKFNDKTNQQEVRVEYTFNDVIHKNNYAKSTSASRVIFQLPADNATAVITFENSRTY HHHHHHCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEE QFNDDYQYTWQDPTGFAAADIANDANESIAKLENLSVTTRLSDSKLSNISTASMSNNDYS EECCCCEEEECCCCCCCHHHHCCCCHHHHHHHHCCEEEEEECCCHHCCCEEEECCCCCEE LTGAQDLMNAASTMLFPELIVNVTSSNLTEPADASFAMFTAGHRAIFTAYSDAFATAIEE EECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHH SWF CCC >Mature Secondary Structure GNSPLAIRLLQTEICLGNCHAKSMKISLLSPIKTMLNCSYRLLYPYQSSRLMNAQIKVL CCCCEEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCEEEHHHHHHE AAGLLCLNLSGCEYIENILHPDDGNDEVIVDDNFRTHALQLGLSEASIIRLCTATDEIRA EEEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEECCCHHHHH NCISKFNDKTNQQEVRVEYTFNDVIHKNNYAKSTSASRVIFQLPADNATAVITFENSRTY HHHHHHCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEE QFNDDYQYTWQDPTGFAAADIANDANESIAKLENLSVTTRLSDSKLSNISTASMSNNDYS EECCCCEEEECCCCCCCHHHHCCCCHHHHHHHHCCEEEEEECCCHHCCCEEEECCCCCEE LTGAQDLMNAASTMLFPELIVNVTSSNLTEPADASFAMFTAGHRAIFTAYSDAFATAIEE EECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHH SWF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA