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The map label for this gene is 157825761

Identifier: 157825761

GI number: 157825761

Start: 621809

End: 622387

Strand: Direct

Name: 157825761

Synonym: A1C_03445

Alternate gene names: NA

Gene position: 621809-622387 (Clockwise)

Preceding gene: 157825760

Following gene: 157825762

Centisome position: 50.51

GC content: 27.46

Gene sequence:

>579_bases
ATGATTATTTCAGTTTCAGGTCAACATATTTCGATCGGTAATAATTTACAAGAATATTCAAAAGAGAGGGCTACGCAAAT
CGTTAAAAAATATTTTACCGATATAATAAATATAGATATACATTTTTCAAAAGAAGGAATGAACTTTAAATGTGATATTA
TAGTAAAATATGGCTCAGGTAAACATAATATAATCAAAAGTCATGATAGGTGTAGCGATACATATATAGCTTTTGATAAA
GCTATGTCAAAACTAGAAAAACAGCTTAGAAAATATAAATCAAAATTCAAAAATCATCATGCTGGTAAAGTAAAAATATC
AGAAATTGCTTACGAAGGTACCAAATATATTATTAATCCGCAATCTGATATTGAAACCTCTAACTCCGAAGATAATGATA
ATCCGGCAATTATCGCTGAAAAGCCTGTAGAAATATTAAAATTATCAGTAAAAGAAGCGGTAATGAAGATGGATTTAGAA
GATTTACCTGCGGTAGTATTTAAAAATATCAATAATGATCGTATCAATATAGTGTATTATCGTAAAGATGGTAACATTTC
TTGGGTAGATTATAATTAA

Upstream 100 bases:

>100_bases
TTTGTAATAAAACTTGAAATTACTCTAAATATAAATTAATTATATAGGTGTTACTTAGTAACGCCTATATATTAATGATT
TCAGATTATAAAGGTTATTT

Downstream 100 bases:

>100_bases
TGATTATTATCCATTATAAAGGGGTTACGCCAAGAATTGATAAAACTGCATATATTGCCGAAATCAGATCTTTAATAGGA
GATGTTGAAATAGGTAGTAA

Product: sigma(54) modulation protein

Products: NA

Alternate protein names: ORF203 [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIISVSGQHISIGNNLQEYSKERATQIVKKYFTDIINIDIHFSKEGMNFKCDIIVKYGSGKHNIIKSHDRCSDTYIAFDK
AMSKLEKQLRKYKSKFKNHHAGKVKISEIAYEGTKYIINPQSDIETSNSEDNDNPAIIAEKPVEILKLSVKEAVMKMDLE
DLPAVVFKNINNDRINIVYYRKDGNISWVDYN

Sequences:

>Translated_192_residues
MIISVSGQHISIGNNLQEYSKERATQIVKKYFTDIINIDIHFSKEGMNFKCDIIVKYGSGKHNIIKSHDRCSDTYIAFDK
AMSKLEKQLRKYKSKFKNHHAGKVKISEIAYEGTKYIINPQSDIETSNSEDNDNPAIIAEKPVEILKLSVKEAVMKMDLE
DLPAVVFKNINNDRINIVYYRKDGNISWVDYN
>Mature_192_residues
MIISVSGQHISIGNNLQEYSKERATQIVKKYFTDIINIDIHFSKEGMNFKCDIIVKYGSGKHNIIKSHDRCSDTYIAFDK
AMSKLEKQLRKYKSKFKNHHAGKVKISEIAYEGTKYIINPQSDIETSNSEDNDNPAIIAEKPVEILKLSVKEAVMKMDLE
DLPAVVFKNINNDRINIVYYRKDGNISWVDYN

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 22097; Mature: 22097

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISVSGQHISIGNNLQEYSKERATQIVKKYFTDIINIDIHFSKEGMNFKCDIIVKYGSG
CEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEEECCC
KHNIIKSHDRCSDTYIAFDKAMSKLEKQLRKYKSKFKNHHAGKVKISEIAYEGTKYIINP
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHEEECCCEEEECC
QSDIETSNSEDNDNPAIIAEKPVEILKLSVKEAVMKMDLEDLPAVVFKNINNDRINIVYY
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEE
RKDGNISWVDYN
EECCCEEEEECC
>Mature Secondary Structure
MIISVSGQHISIGNNLQEYSKERATQIVKKYFTDIINIDIHFSKEGMNFKCDIIVKYGSG
CEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEEECCC
KHNIIKSHDRCSDTYIAFDKAMSKLEKQLRKYKSKFKNHHAGKVKISEIAYEGTKYIINP
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHEEECCCEEEECC
QSDIETSNSEDNDNPAIIAEKPVEILKLSVKEAVMKMDLEDLPAVVFKNINNDRINIVYY
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEE
RKDGNISWVDYN
EECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991712; 12597275 [H]