| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is lon [H]
Identifier: 157825757
GI number: 157825757
Start: 616356
End: 618692
Strand: Direct
Name: lon [H]
Synonym: A1C_03415
Alternate gene names: 157825757
Gene position: 616356-618692 (Clockwise)
Preceding gene: 157825755
Following gene: 157825760
Centisome position: 50.07
GC content: 33.98
Gene sequence:
>2337_bases ATGAATAAAAAGTCCCTGCCGCTTATGGCATTACGAGATATGGTAGTATTCCCGGGAGTAATTGCTCCTATTTTCGTGGG TAGACAAAAATCGCTGAAAGCGTTATCCAATACTACAATTTCTGAGGAAGATAATAGTAAATATATTTTAGTAACTTTAC AGAAAAAATTTGATCAAGAAAACCCTAGTAAACATGAACTTTATAACACAGCTATACTTGCCAAGATTATCCAAATAGTG AAGTTGCCTAATAATACGGCAAAAATATTAATAGAAGCAGTAGCAAGAGTAAAGCTAAGCAATATCAAAGGCGAAGAGGC TTTTGAAGCAAATTATGAAATTATTCCAGATGAAGAAATATTTGATGTTAATAACATGCGTTCATTAGTGGATAATGCAG TACAATTATTTAGTAAATATGTGATTAATAATAAGAAAATTAATGCGGAAATTATTGAAACTATCAATAAAGAAATAAGT AATAGTACTAATTTTATAAATATTATAAATATATTAGCTTCACATCTGATAACTTCACTTGAGGCCAAGCAGCATTTATT AGAAGAAACTAGCCCTTTTAAGCGTATCACTGCGGTTATTAGTACGCTTACTTCCAATATAGTTAATTCAGAAACCGAGC AGGCATTGCAGCAAAGAGTAAGAAAGCAAATCGAAAAAACGCAGCGTGATTATTATCTGCACGAACAAATGAAAGCTATT CAAAAGGAACTTGATGAAGATAAATCGGAACTTGCCGATATTGAGAAAAAAATTAAAAGTTTAAAATTATCTAAAGAAGC TAAAGAGAAGGCAGAATCAGAGCTTAAAAAACTTCGTAGTATGAATCAAATGTCGGCGGAGTCGGGAGTGACGCGTAATT ATCTTGAGACTTTACTAAGTTTGCCTTGGGGTAAGTATGATAATAGCAAAATAGATATTAACCAAGCAGAGAAAATCTTA AATCGTGACCATTTTGGACTTGAAAAAGTGAAAGAACGAATTATAGAATATTTAGCAGTATTACAGCGTTCAAGTAAAAT TAGAGGGCCTATATTATGTTTGATAGGTCCGCCAGGGGTTGGTAAAACTTCACTTGTAAAATCTATTGCTGAAGGAATGG GGAGAAAATACACTAAATTCGCTCTAGGCGGTGTTAGAGACGAAGCAGAAATCAGAGGGCATAGAAAAACTTACCTTGGA TCAATGCCGGGTAAAATTTTAGGTCAACTTAAGAAAGTTAAGACTAGTAACCCTGTAATGCTGCTTGATGAAATTGATAA AATGAGTTCTGATTTTAGAGGTGATCCGGCATCCGCTTTGCTTGAGGTATTAGACCCTGAGCAGAATAGTCACTTTGTTG ATCATTATCTAGAAGTAGAATATGATCTATCAAATGTAATATTTATTGCTACTGCTAACTCACATGATTTACCTAGAGCT TTAAGTGATAGAATGGAAAAAATATATATATCCGGTTATGTAGAGGAAGAAAAACTCCAAATCGTCAAAAATTATTTAGT GCCGAAACAATTTAAAATGCATAAAATCAAAAAAGATGAAATTACTATATCTGAGACGGCAATTTTGGATTTAATTAGAT ATTATACCAAGGAATCAGGTGTAAGAGCTTTAGAACGTGAAATAGGAGCGTTAACTAGAAAAGCATTAAAGCAAATTTTA GCAGATAAAACAGTTCAGCATATCGCCGTAGATAGTAATAATCTTGAAGAATTTTTAGGGGCTAAAAAATATAATTTCGG GATTGCTGAGCAAGAAGACCAAATAGGGAGTACTACAGGACTTGCTTATACTGAATTAGGAGGAGAGCTTTTAACTATAG AGGCTTTAGCATTTCTAGGGAAAGGTGAAATCAAAACCACCGGAAAACTTGGTGATGTTATGAAAGAATCGGCAATGGCT GCCTATAGTTGTTTTAGAAGTAGAGCAACAAATTTTGGATTAAAATACGATAATTATAAAGATTTTGATATTCACATTCA CGTACCGGCCGGAGCTATTCCAAAAGATGGACCGTCTGCCGGCTGTGCTTTGTTTACTACTATTGTTTCGTTAATGACTA AAATACCAGTACACCGCACTGTAGCAATGACCGGTGAAATTACTTTAAGAGGAAATGTTTTACCTATAGGTGGTCTTAAG GAAAAGTTACTTGCTGCGAGTAGGGGAGGGATTAAAACCGTATTAATTCCTGAGGAGAATGTTAAAGACTTAAGAGATAT ACCGTCGAATATAAAAGAAAGCCTAGAAATTATATCCGTGTCAAATATCGACCAAGTACTTAAGTATGCTTTAGTAGAAA CCCCGTTAAATAAATAG
Upstream 100 bases:
>100_bases TAGTAATAAAGTCATAAATATAATTAATAAAGATGGCTTGCAATCGCATTTATACTATATTATATAGTTAATAATTAGAA ATTTTTAAAGGTTTTAATTG
Downstream 100 bases:
>100_bases AGATCAGTCATATACTCGTTTAATTTAAAAAATGGGCGTCGTTGTTTAATATTGTTTGATCTGCGTGATCGTCTGTGTAC GCTGTGCGGTCAAAAAAATA
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MNKKSLPLMALRDMVVFPGVIAPIFVGRQKSLKALSNTTISEEDNSKYILVTLQKKFDQENPSKHELYNTAILAKIIQIV KLPNNTAKILIEAVARVKLSNIKGEEAFEANYEIIPDEEIFDVNNMRSLVDNAVQLFSKYVINNKKINAEIIETINKEIS NSTNFINIINILASHLITSLEAKQHLLEETSPFKRITAVISTLTSNIVNSETEQALQQRVRKQIEKTQRDYYLHEQMKAI QKELDEDKSELADIEKKIKSLKLSKEAKEKAESELKKLRSMNQMSAESGVTRNYLETLLSLPWGKYDNSKIDINQAEKIL NRDHFGLEKVKERIIEYLAVLQRSSKIRGPILCLIGPPGVGKTSLVKSIAEGMGRKYTKFALGGVRDEAEIRGHRKTYLG SMPGKILGQLKKVKTSNPVMLLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVIFIATANSHDLPRA LSDRMEKIYISGYVEEEKLQIVKNYLVPKQFKMHKIKKDEITISETAILDLIRYYTKESGVRALEREIGALTRKALKQIL ADKTVQHIAVDSNNLEEFLGAKKYNFGIAEQEDQIGSTTGLAYTELGGELLTIEALAFLGKGEIKTTGKLGDVMKESAMA AYSCFRSRATNFGLKYDNYKDFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEITLRGNVLPIGGLK EKLLAASRGGIKTVLIPEENVKDLRDIPSNIKESLEIISVSNIDQVLKYALVETPLNK
Sequences:
>Translated_778_residues MNKKSLPLMALRDMVVFPGVIAPIFVGRQKSLKALSNTTISEEDNSKYILVTLQKKFDQENPSKHELYNTAILAKIIQIV KLPNNTAKILIEAVARVKLSNIKGEEAFEANYEIIPDEEIFDVNNMRSLVDNAVQLFSKYVINNKKINAEIIETINKEIS NSTNFINIINILASHLITSLEAKQHLLEETSPFKRITAVISTLTSNIVNSETEQALQQRVRKQIEKTQRDYYLHEQMKAI QKELDEDKSELADIEKKIKSLKLSKEAKEKAESELKKLRSMNQMSAESGVTRNYLETLLSLPWGKYDNSKIDINQAEKIL NRDHFGLEKVKERIIEYLAVLQRSSKIRGPILCLIGPPGVGKTSLVKSIAEGMGRKYTKFALGGVRDEAEIRGHRKTYLG SMPGKILGQLKKVKTSNPVMLLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVIFIATANSHDLPRA LSDRMEKIYISGYVEEEKLQIVKNYLVPKQFKMHKIKKDEITISETAILDLIRYYTKESGVRALEREIGALTRKALKQIL ADKTVQHIAVDSNNLEEFLGAKKYNFGIAEQEDQIGSTTGLAYTELGGELLTIEALAFLGKGEIKTTGKLGDVMKESAMA AYSCFRSRATNFGLKYDNYKDFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEITLRGNVLPIGGLK EKLLAASRGGIKTVLIPEENVKDLRDIPSNIKESLEIISVSNIDQVLKYALVETPLNK >Mature_778_residues MNKKSLPLMALRDMVVFPGVIAPIFVGRQKSLKALSNTTISEEDNSKYILVTLQKKFDQENPSKHELYNTAILAKIIQIV KLPNNTAKILIEAVARVKLSNIKGEEAFEANYEIIPDEEIFDVNNMRSLVDNAVQLFSKYVINNKKINAEIIETINKEIS NSTNFINIINILASHLITSLEAKQHLLEETSPFKRITAVISTLTSNIVNSETEQALQQRVRKQIEKTQRDYYLHEQMKAI QKELDEDKSELADIEKKIKSLKLSKEAKEKAESELKKLRSMNQMSAESGVTRNYLETLLSLPWGKYDNSKIDINQAEKIL NRDHFGLEKVKERIIEYLAVLQRSSKIRGPILCLIGPPGVGKTSLVKSIAEGMGRKYTKFALGGVRDEAEIRGHRKTYLG SMPGKILGQLKKVKTSNPVMLLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVIFIATANSHDLPRA LSDRMEKIYISGYVEEEKLQIVKNYLVPKQFKMHKIKKDEITISETAILDLIRYYTKESGVRALEREIGALTRKALKQIL ADKTVQHIAVDSNNLEEFLGAKKYNFGIAEQEDQIGSTTGLAYTELGGELLTIEALAFLGKGEIKTTGKLGDVMKESAMA AYSCFRSRATNFGLKYDNYKDFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEITLRGNVLPIGGLK EKLLAASRGGIKTVLIPEENVKDLRDIPSNIKESLEIISVSNIDQVLKYALVETPLNK
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=837, Percent_Identity=36.6786140979689, Blast_Score=516, Evalue=1e-146, Organism=Homo sapiens, GI21396489, Length=602, Percent_Identity=42.6910299003322, Blast_Score=496, Evalue=1e-140, Organism=Escherichia coli, GI1786643, Length=774, Percent_Identity=50.9043927648579, Blast_Score=775, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=658, Percent_Identity=39.9696048632219, Blast_Score=444, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17556486, Length=544, Percent_Identity=42.0955882352941, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319449, Length=640, Percent_Identity=38.59375, Blast_Score=458, Evalue=1e-129, Organism=Drosophila melanogaster, GI24666867, Length=609, Percent_Identity=42.200328407225, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI221513036, Length=609, Percent_Identity=42.200328407225, Blast_Score=471, Evalue=1e-133,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 87181; Mature: 87181
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKSLPLMALRDMVVFPGVIAPIFVGRQKSLKALSNTTISEEDNSKYILVTLQKKFDQE CCCCCCCHHHHHHHHHHCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCC NPSKHELYNTAILAKIIQIVKLPNNTAKILIEAVARVKLSNIKGEEAFEANYEIIPDEEI CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCCCHH FDVNNMRSLVDNAVQLFSKYVINNKKINAEIIETINKEISNSTNFINIINILASHLITSL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EAKQHLLEETSPFKRITAVISTLTSNIVNSETEQALQQRVRKQIEKTQRDYYLHEQMKAI HHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELDEDKSELADIEKKIKSLKLSKEAKEKAESELKKLRSMNQMSAESGVTRNYLETLLS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LPWGKYDNSKIDINQAEKILNRDHFGLEKVKERIIEYLAVLQRSSKIRGPILCLIGPPGV CCCCCCCCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC GKTSLVKSIAEGMGRKYTKFALGGVRDEAEIRGHRKTYLGSMPGKILGQLKKVKTSNPVM CHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCEE LLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVIFIATANSHDLPRA EHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCCHHH LSDRMEKIYISGYVEEEKLQIVKNYLVPKQFKMHKIKKDEITISETAILDLIRYYTKESG HHHHHHEEHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH VRALEREIGALTRKALKQILADKTVQHIAVDSNNLEEFLGAKKYNFGIAEQEDQIGSTTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCC LAYTELGGELLTIEALAFLGKGEIKTTGKLGDVMKESAMAAYSCFRSRATNFGLKYDNYK CCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEITLRGNVLPIGGLK CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEECCCHH EKLLAASRGGIKTVLIPEENVKDLRDIPSNIKESLEIISVSNIDQVLKYALVETPLNK HHHHHHCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKKSLPLMALRDMVVFPGVIAPIFVGRQKSLKALSNTTISEEDNSKYILVTLQKKFDQE CCCCCCCHHHHHHHHHHCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCC NPSKHELYNTAILAKIIQIVKLPNNTAKILIEAVARVKLSNIKGEEAFEANYEIIPDEEI CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCCCHH FDVNNMRSLVDNAVQLFSKYVINNKKINAEIIETINKEISNSTNFINIINILASHLITSL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EAKQHLLEETSPFKRITAVISTLTSNIVNSETEQALQQRVRKQIEKTQRDYYLHEQMKAI HHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELDEDKSELADIEKKIKSLKLSKEAKEKAESELKKLRSMNQMSAESGVTRNYLETLLS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LPWGKYDNSKIDINQAEKILNRDHFGLEKVKERIIEYLAVLQRSSKIRGPILCLIGPPGV CCCCCCCCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC GKTSLVKSIAEGMGRKYTKFALGGVRDEAEIRGHRKTYLGSMPGKILGQLKKVKTSNPVM CHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCEE LLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVIFIATANSHDLPRA EHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCCHHH LSDRMEKIYISGYVEEEKLQIVKNYLVPKQFKMHKIKKDEITISETAILDLIRYYTKESG HHHHHHEEHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH VRALEREIGALTRKALKQILADKTVQHIAVDSNNLEEFLGAKKYNFGIAEQEDQIGSTTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCC LAYTELGGELLTIEALAFLGKGEIKTTGKLGDVMKESAMAAYSCFRSRATNFGLKYDNYK CCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEITLRGNVLPIGGLK CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEECCCHH EKLLAASRGGIKTVLIPEENVKDLRDIPSNIKESLEIISVSNIDQVLKYALVETPLNK HHHHHHCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]