| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825747
Identifier: 157825747
GI number: 157825747
Start: 606637
End: 606834
Strand: Direct
Name: 157825747
Synonym: A1C_03365
Alternate gene names: NA
Gene position: 606637-606834 (Clockwise)
Preceding gene: 157825746
Following gene: 157825748
Centisome position: 49.28
GC content: 33.33
Gene sequence:
>198_bases TTGCAAGAATTTACTTATTTGAGAAAGCAGTATTGGGGCAATCATTTTTGGGCTAGAGGTTATATGGCAGTTAGTTTGGG TAATATTACTGATGAAATGATACAGCAGTATATTGATGAGCAAGAAGGTGCAACTATTAATGATGACCTATTTCTAATCG ATTACACTTCTATTTATAACATCTCAGCTTATAGCTGA
Upstream 100 bases:
>100_bases AGTAGCTTGTGATCATGTTCATATGTTTATCTAGTATAGACCGCAAATAACACCTAGCAAACTTGTGCAGTATTGAAAAT GCAGTAGCTCAAGAATATTA
Downstream 100 bases:
>100_bases GAGTTGTTTAGTGATTATATTTCTCTTACTAGTATTACCGCATAATTTTAAGATTAGAAAAGTACTATATGTCATTTCTG TACAGCATTGTTGTATAGCT
Product: transposase IS200-family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MQEFTYLRKQYWGNHFWARGYMAVSLGNITDEMIQQYIDEQEGATINDDLFLIDYTSIYNISAYS
Sequences:
>Translated_65_residues MQEFTYLRKQYWGNHFWARGYMAVSLGNITDEMIQQYIDEQEGATINDDLFLIDYTSIYNISAYS >Mature_65_residues MQEFTYLRKQYWGNHFWARGYMAVSLGNITDEMIQQYIDEQEGATINDDLFLIDYTSIYNISAYS
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7744; Mature: 7744
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFTYLRKQYWGNHFWARGYMAVSLGNITDEMIQQYIDEQEGATINDDLFLIDYTSIYN CCHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHCCCCCCEECCCEEEEEECCEEE ISAYS EEECC >Mature Secondary Structure MQEFTYLRKQYWGNHFWARGYMAVSLGNITDEMIQQYIDEQEGATINDDLFLIDYTSIYN CCHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHCCCCCCEECCCEEEEEECCEEE ISAYS EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA